prot_S-dermatodea_contig11433.928.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11433.928.1
Unique Nameprot_S-dermatodea_contig11433.928.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length138
Homology
BLAST of mRNA_S-dermatodea_contig11433.928.1 vs. uniprot
Match: A0A6T5NUG8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NUG8_HETAK)

HSP 1 Score: 72.0 bits (175), Expect = 1.990e-13
Identity = 46/134 (34.33%), Postives = 72/134 (53.73%), Query Frame = 0
Query:    1 MSSVLSTDGLTEKVETRVMGLGIGVFLIFFFSLVALVICLVGATTPRPGAFSCGGASLLGFVVLLLLVAEQDSRYIEDKSDQLEEYDQAFYPRILLVFIFALAALVGLGSVCVTHLAKPVHATPMYDQRTDVRR 134
            M+ +L T  + E   TRV+G+GIGVFLI FF  +AL++ +VGA   + G F   G  +   V  +L  A++ S+Y+    + +++Y   FYPR++   I    AL+   +  V  L + VH   M D  T  +R
Sbjct:    1 MTILLQTAEVVEAEPTRVLGVGIGVFLIAFFFALALLLSVVGAALGKKGIFFGIGTGIFLLVCAILFGADRGSQYVI-VEETVQDYSALFYPRVVFAAILGAGALMA-AAPAVQMLTEQVHTEVMDDLETRRKR 132          
BLAST of mRNA_S-dermatodea_contig11433.928.1 vs. uniprot
Match: A0A2J8A4F0_9CHLO (Transmembrane protein 218 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A4F0_9CHLO)

HSP 1 Score: 67.4 bits (163), Expect = 2.000e-11
Identity = 34/110 (30.91%), Postives = 62/110 (56.36%), Query Frame = 0
Query:   16 TRVMGLGIGVFLIFFFSLVALVICLVGATTPRPGAFSCGGASLLGFVVLLLLVAEQDSRYIEDKSDQLEEYDQAFYPRILLVFIFALAALVGLGSVCVTHLAKPVHATPM 125
            TRV+G+G+GVFL+FFF  ++LV+CLVG+ T    A      ++ G + L+L+ + +  + ++      E YD    P +++  +  +  L+G   + V H+   V+A P+
Sbjct:   42 TRVVGVGLGVFLVFFFLALSLVVCLVGSRTKYRWAIYMASTAMFGIIALVLIASPKGEKPVKPP----EGYDLTIIPVVIITAVVCIGVLLGAVGMLVFHVLPTVYARPL 147          
BLAST of mRNA_S-dermatodea_contig11433.928.1 vs. uniprot
Match: D8TRS0_VOLCA (Transmembrane protein 218 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TRS0_VOLCA)

HSP 1 Score: 59.7 bits (143), Expect = 7.920e-9
Identity = 33/109 (30.28%), Postives = 61/109 (55.96%), Query Frame = 0
Query:   17 RVMGLGIGVFLIFFFSLVALVICLVGATTPRPGAFSCGGASLLGFVVLLLLVAEQDSRYIEDKSDQLEEYDQAFYPRILLVFIFALAALVGLGSVCVTHLAKPVHATPM 125
            RV G+G+GVFL+FFF  ++++ICL+G+ +          A++ G V L+LL + +  +    ++   E YDQ   P ++++ I A+  L+    + +  L   V+A P+
Sbjct:    4 RVAGVGVGVFLLFFFLALSVLICLLGSRSKLRWIVFTASAAMFGIVALVLLASPKGPK----RTKPPEGYDQTIVPLVVVMVILAIGVLMSAVGMLIFALLPTVYARPL 108          
BLAST of mRNA_S-dermatodea_contig11433.928.1 vs. uniprot
Match: A0A8J2SSJ6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSJ6_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.440e-8
Identity = 39/134 (29.10%), Postives = 65/134 (48.51%), Query Frame = 0
Query:    8 DGLTEKVETRVMGLGIGVFLIFFFSLVALVICLVGATTPRPGA----FSCGGASLLGFVVLLLLVAEQDSRYIEDKSDQLEEYDQAFYPRILLVFIFALAALVGLGSVCVTHLAKPVHATPMYDQRTDVRRPIF 137
             GL    + RV+G+G+GVFL+ FF +    +C  GA  P+       F+  G    G V  +L +A++   Y  ++  +  E+D      I++  + A AA  GLG+V   H+  PV A  +  +    R+ +F
Sbjct:   40 QGLRRAGKERVLGVGLGVFLLSFFFIAMCALCWAGALLPQERGEQWIFNVVGTLGFGVVACVLFLADERPEYASEERAE-REHDDNLIGLIVVAGLLACAAAFGLGAVLCYHVCAPVEAPLVQKRPAGDRQGLF 172          
BLAST of mRNA_S-dermatodea_contig11433.928.1 vs. uniprot
Match: A0A507FMQ4_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FMQ4_9FUNG)

HSP 1 Score: 54.7 bits (130), Expect = 2.450e-6
Identity = 32/110 (29.09%), Postives = 57/110 (51.82%), Query Frame = 0
Query:   13 KVETRVMGLGIGVFLIFFFSLVALVICLVGATTPRPGAFSCGGASLLGFVVLLLLVAEQDSRYIEDKSDQLEEYDQAFYPRILLVFIFALAALVGLGSVCVTHLAKPVHA 122
            K   R+MGLG G+F+      + L+  L+ +     G F  G A  +  VV+LL    +    +    D +  +D  +YPR+ ++ + ++ A+VG G+V   ++A PV+A
Sbjct:   88 KPAARMMGLGWGLFICVAIGALLLMANLIASVHDSAGFFYFGSAVFMAAVVILLACLPRAP--VGSVPDTVTSFDLTYYPRVGIMLLISIGAMVGAGNVMAYYVAVPVYA 195          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11433.928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6T5NUG8_HETAK1.990e-1334.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2J8A4F0_9CHLO2.000e-1130.91Transmembrane protein 218 n=1 Tax=Tetrabaena socia... [more]
D8TRS0_VOLCA7.920e-930.28Transmembrane protein 218 n=1 Tax=Volvox carteri f... [more]
A0A8J2SSJ6_9STRA1.440e-829.10Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A507FMQ4_9FUNG2.450e-629.09Uncharacterized protein n=1 Tax=Chytriomyces confe... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..137
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 89..111
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 49..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11433contigS-dermatodea_contig11433:879..3545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11433.928.1mRNA_S-dermatodea_contig11433.928.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11433 879..3545 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11433.928.1 ID=prot_S-dermatodea_contig11433.928.1|Name=mRNA_S-dermatodea_contig11433.928.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=138bp
MSSVLSTDGLTEKVETRVMGLGIGVFLIFFFSLVALVICLVGATTPRPGA
FSCGGASLLGFVVLLLLVAEQDSRYIEDKSDQLEEYDQAFYPRILLVFIF
ALAALVGLGSVCVTHLAKPVHATPMYDQRTDVRRPIF*
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