prot_S-dermatodea_contig11424.922.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11424.922.1
Unique Nameprot_S-dermatodea_contig11424.922.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length125
Homology
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BLAST of mRNA_S-dermatodea_contig11424.922.1 vs. uniprot
Match: D7FLT0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT0_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 3.490e-11
Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 0 
Query:   13 SEHEQKIMSMEVFDSVLKEM-PDADVETRLKRADEVMLERLKIAYPKEYEPKPKPRSQ---SDDVWENGNAVRYMAYAIALLLAMTGIYAFRD 101
            S  ++++  M  + + ++EM  DAD    LKR +E+  + L+ ++P  Y+P P  R +   SDDVWENG  VRY+A  +ALLLA  G+YA+ D
Sbjct:   45 STRDKELAKMRAYKAAVQEMGEDADELAMLKRVEEITDKLLRESFPDAYKPAPAKRPKAVDSDDVWENGTVVRYLARVMALLLAAAGLYAWND 137
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11424.922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLT0_ECTSI3.490e-1140.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..81
NoneNo IPR availableTMHMMTMhelixcoord: 77..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11424contigS-dermatodea_contig11424:352..2894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11424.922.1mRNA_S-dermatodea_contig11424.922.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11424 331..3128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11424.922.1 ID=prot_S-dermatodea_contig11424.922.1|Name=mRNA_S-dermatodea_contig11424.922.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=125bp
MPRPKKGGPKGPSEHEQKIMSMEVFDSVLKEMPDADVETRLKRADEVMLE
RLKIAYPKEYEPKPKPRSQSDDVWENGNAVRYMAYAIALLLAMTGIYAFR
DAITGKESFDPRRGPHASDERKNR*
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