prot_S-dermatodea_contig11402.904.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11402.904.1
Unique Nameprot_S-dermatodea_contig11402.904.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length228
Homology
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BLAST of mRNA_S-dermatodea_contig11402.904.1 vs. uniprot
Match: D7FVT9_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT9_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 8.170e-11
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 0 
Query:   72 LSLEEVKSLTVPKLKAELTRLDQPTGGLKRKAQYVDALTALIEQQNHN 119
            +S++EV SLTVPKLKAELTRL+QP GGLKRKAQ V+ALTA IE+Q  +
Sbjct:    6 VSIDEVSSLTVPKLKAELTRLNQPVGGLKRKAQLVEALTAYIEKQQQD 53
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BLAST of mRNA_S-dermatodea_contig11402.904.1 vs. uniprot
Match: A0A6H5JTQ3_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ3_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 5.070e-10
Identity = 33/48 (68.75%), Postives = 42/48 (87.50%), Query Frame = 0 
Query:   72 LSLEEVKSLTVPKLKAELTRLDQPTGGLKRKAQYVDALTALIEQQNHN 119
            +S++E+ SLTVPKLKAELTRL+QP GGLKRKAQ V+ALTA +E+Q  +
Sbjct:    6 VSIDELSSLTVPKLKAELTRLNQPVGGLKRKAQLVEALTAYMEKQQQD 53
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11402.904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVT9_ECTSI8.170e-1172.92SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JTQ3_9PHAE5.070e-1068.75SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11402contigS-dermatodea_contig11402:1832..3016 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11402.904.1mRNA_S-dermatodea_contig11402.904.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11402 1830..3016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11402.904.1 ID=prot_S-dermatodea_contig11402.904.1|Name=mRNA_S-dermatodea_contig11402.904.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=228bp
RGSRVEAWLCVSVGTRSRRGVCLCLCPRRLPVPRSALVSLCLCSGERANC
CFLLPFRLCVRRSNMGDKWCPLSLEEVKSLTVPKLKAELTRLDQPTGGLK
RKAQYVDALTALIEQQNHNHAEDQASPAADAAGGNVGALYTDAASDNVGQ
PEYQPGDPNEADATEVDETTGGVTAAAADAAGMGESPRPHDEPEPAPEAE
DGESAPGGKAQEGEGLYALGEESVTGSG
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