prot_S-dermatodea_contig11388.896.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11388.896.1
Unique Nameprot_S-dermatodea_contig11388.896.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length54
Homology
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BLAST of mRNA_S-dermatodea_contig11388.896.1 vs. uniprot
Match: D7FTE2_ECTSI (L-type lectin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE2_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 3.450e-19
Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 0 
Query:    1 MTADKPDNTGTLWSRSTIGVSEFSLEWRFRISGSEPSKYGDTIALVISPTKYKA 54
            +T DKP   GTLWSRSTI  S+FSLEW+FRISG+E  KYGDTIALVI+P KYKA
Sbjct:   80 LTPDKPQELGTLWSRSTIATSDFSLEWKFRISGTEKVKYGDTIALVIAPMKYKA 133
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BLAST of mRNA_S-dermatodea_contig11388.896.1 vs. uniprot
Match: A0A835YWL8_9STRA (Legume-like lectin family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWL8_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 7.190e-7
Identity = 22/48 (45.83%), Postives = 33/48 (68.75%), Query Frame = 0 
Query:    1 MTADKPDNTGTLWSRSTIGVSEFSLEWRFRISGSEPSKYGDTIALVIS 48
            +T DKP   G +WSR+T+   +FS+ W+FRISG +   +GD +AL I+
Sbjct:   47 VTPDKPHQLGHVWSRTTLDSDDFSVIWKFRISGRQSETFGDFLALSIT 94
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11388.896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTE2_ECTSI3.450e-1974.07L-type lectin-like domain-containing protein n=2 T... [more]
A0A835YWL8_9STRA7.190e-745.83Legume-like lectin family-domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005052Legume-like lectinPFAMPF03388Lectin_leg-likecoord: 1..45
e-value: 7.4E-6
score: 25.5
IPR005052Legume-like lectinPROSITEPS51328L_LECTIN_LIKEcoord: 1..54
score: 12.064
NoneNo IPR availableGENE3D2.60.120.200coord: 1..54
e-value: 3.3E-8
score: 35.2
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 2..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11388contigS-dermatodea_contig11388:4750..7323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11388.896.1mRNA_S-dermatodea_contig11388.896.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11388 4750..7326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11388.896.1 ID=prot_S-dermatodea_contig11388.896.1|Name=mRNA_S-dermatodea_contig11388.896.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=54bp
MTADKPDNTGTLWSRSTIGVSEFSLEWRFRISGSEPSKYGDTIALVISPT
KYKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005052Lectin_leg
IPR013320ConA-like_dom_sf