prot_S-dermatodea_contig11376.887.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11376.887.1
Unique Nameprot_S-dermatodea_contig11376.887.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length123
Homology
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BLAST of mRNA_S-dermatodea_contig11376.887.1 vs. uniprot
Match: D8LD29_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD29_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 8.410e-47
Identity = 82/121 (67.77%), Postives = 100/121 (82.64%), Query Frame = 0 
Query:    1 MLKMAKKMSKVVKKQLRNPGTQQFVCSFLKQAEPDTIKSLAGAAGVP-VSEAIIAKVSTYLKEADGKTLESWISFGEISSGIYRRLSQLAVLWSRGSALAGVWLIWVWLRACFAPIALASA 120
            MLKMAKKMSK VKKQLRNPGTQQ VC+FL QA+P+T+ SLA  AG P  +EAI+  +S YL++ADGKTLESWI +GEI++  +RRL Q +VLWSRG ALAG+WL+WVW+RACFAPI +  A
Sbjct:  318 MLKMAKKMSKGVKKQLRNPGTQQMVCAFLNQAKPETLMSLATTAGFPGANEAIVNGLSGYLQKADGKTLESWIDYGEIATCAFRRLKQFSVLWSRGIALAGIWLVWVWVRACFAPIVVQKA 438
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11376.887.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD29_ECTSI8.410e-4767.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..108
NoneNo IPR availableTMHMMTMhelixcoord: 98..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11376contigS-dermatodea_contig11376:459..1947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11376.887.1mRNA_S-dermatodea_contig11376.887.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11376 436..2935 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11376.887.1 ID=prot_S-dermatodea_contig11376.887.1|Name=mRNA_S-dermatodea_contig11376.887.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=123bp
MLKMAKKMSKVVKKQLRNPGTQQFVCSFLKQAEPDTIKSLAGAAGVPVSE
AIIAKVSTYLKEADGKTLESWISFGEISSGIYRRLSQLAVLWSRGSALAG
VWLIWVWLRACFAPIALASAKA*
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