prot_S-dermatodea_contig11332.861.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11332.861.1
Unique Nameprot_S-dermatodea_contig11332.861.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length212
Homology
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BLAST of mRNA_S-dermatodea_contig11332.861.1 vs. uniprot
Match: A0A6H5L0T6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T6_9PHAE)

HSP 1 Score: 331 bits (849), Expect = 4.450e-103
Identity = 155/212 (73.11%), Postives = 180/212 (84.91%), Query Frame = 0 
Query:    1 GYQIVLEGDDFEDRPSWAYHLGAVLITYFCVNASLRMVAEGPVKYIMLWRHSLGMVLNLIGVAFYLGLWFDGEGWRNLYHILQASRLMILWNVLHKIGPTSAEVAKRLEFVFPAVLRASFVLFSVTYSYAVLAYAMYCDTPLGKKPLDSIADHSMTQRWLFYKDVVSFESLLQSFASMTDVIMLSNWPIFMDAAADVSNSWLTKLFFYSFKV 212
            GYQIVLEGDD E RP+WAY LG  LI YFCV ASLRM+ +G   YIM WRH+LGM LNLIGV +Y+GLWFDG GW + Y ILQASR++ILWNVLH++G TS+EVA+RLEFVFPAVLRASFVLFSVTYSY+VLA+ MYC TPLG +P+DS+ADHSM QRW +YKDV+SF SL QSFA+MTD++MLSNWP+FMDAA DV N    K+FFYSFKV
Sbjct:  595 GYQIVLEGDDPEGRPTWAYPLGGFLIAYFCVQASLRMIVDGARLYIMQWRHALGMCLNLIGVTYYMGLWFDGTGWHSFYKILQASRVVILWNVLHRLGSTSSEVARRLEFVFPAVLRASFVLFSVTYSYSVLAFDMYCATPLGVEPVDSVADHSMMQRWAYYKDVLSFASLHQSFAAMTDIVMLSNWPLFMDAAGDVGNVVTAKIFFYSFKV 806
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BLAST of mRNA_S-dermatodea_contig11332.861.1 vs. uniprot
Match: D7FR41_ECTSI (Voltage-gated Ion Channel (VIC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR41_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 6.670e-103
Identity = 157/212 (74.06%), Postives = 178/212 (83.96%), Query Frame = 0 
Query:    1 GYQIVLEGDDFEDRPSWAYHLGAVLITYFCVNASLRMVAEGPVKYIMLWRHSLGMVLNLIGVAFYLGLWFDGEGWRNLYHILQASRLMILWNVLHKIGPTSAEVAKRLEFVFPAVLRASFVLFSVTYSYAVLAYAMYCDTPLGKKPLDSIADHSMTQRWLFYKDVVSFESLLQSFASMTDVIMLSNWPIFMDAAADVSNSWLTKLFFYSFKV 212
            GYQIVLEGDD E RP+WAY LG  LI YFCV ASL M+ +G   YI  WRH+LGM LNLIGVA+Y+GLWFDG GW + Y ILQASR++ILWNVLH++G TS+EVA RLEFVFPAVLRASFVLFSVTYSY+VLA+ MYC TPLG +P+DS+ADHSM QRW +YKDV+SF SL QSFA+MTDVIMLSNWP+FMDAA DV N    KLFFYSFKV
Sbjct:  462 GYQIVLEGDDPERRPTWAYPLGGFLIAYFCVQASLWMIVDGARLYIRQWRHALGMCLNLIGVAYYMGLWFDGTGWHSFYQILQASRVVILWNVLHRLGSTSSEVATRLEFVFPAVLRASFVLFSVTYSYSVLAFDMYCATPLGVEPVDSVADHSMMQRWAYYKDVISFASLHQSFAAMTDVIMLSNWPLFMDAAGDVGNVVTAKLFFYSFKV 673
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BLAST of mRNA_S-dermatodea_contig11332.861.1 vs. uniprot
Match: D7FGS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGS1_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 1.620e-76
Identity = 122/211 (57.82%), Postives = 159/211 (75.36%), Query Frame = 0 
Query:    1 GYQIVLEGDDFEDRPSWAYHLGAVLITYFCVNASLRMVAEGPVKYIMLWRHSLGMVLNLIGVAFYLGLWFDGEGWRNLYHILQASRLMILWNVLHKIGPTSAEVAKRLEFVFPAVLRASFVLFSVTYSYAVLAYAMYCDTPLGKKPLDSIADHSMTQRWLFYKDVVSFESLLQSFASMTDVIMLSNWPIFMDAAADVSNSWLTKLFFYSFK 211
            GYQIV  GD+ E RP+WAY LGAVLI YFC+ A+LRM+A G   Y + WR+ L M LN++G+A+Y  LW  G+ + + Y ILQA RL +LW  LH +GPTS++VA RLEFVFPAV+RASFVLF++TY+YAV+AYAMYC TPLG +P+  + D SM +R+   K+V +F +L +S+ASM  V+M SNWP+FMDAA  V N  + K+FFYSFK
Sbjct:  107 GYQIVRAGDNPEGRPAWAYPLGAVLIFYFCLQAALRMIAGGVRPYFLEWRNILEMSLNMVGIAYYAQLWPRGQAFHSFYQILQALRLELLWINLHLLGPTSSDVATRLEFVFPAVIRASFVLFALTYTYAVVAYAMYCSTPLGGEPIGDLKDDSMVKRFAAVKEVANFATLPRSYASMMYVVMFSNWPMFMDAAGVVGNLVVAKVFFYSFK 317
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11332.861.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L0T6_9PHAE4.450e-10373.11Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FR41_ECTSI6.670e-10374.06Voltage-gated Ion Channel (VIC) Superfamily n=1 Ta... [more]
D7FGS1_ECTSI1.620e-7657.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028801Two pore calcium channel protein 1PANTHERPTHR46474FAMILY NOT NAMEDcoord: 23..210
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..137
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 17..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..212
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..114
NoneNo IPR availableTMHMMTMhelixcoord: 15..35
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 48..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11332contigS-dermatodea_contig11332:912..5256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11332.861.1mRNA_S-dermatodea_contig11332.861.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11332 912..5256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11332.861.1 ID=prot_S-dermatodea_contig11332.861.1|Name=mRNA_S-dermatodea_contig11332.861.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=212bp
GYQIVLEGDDFEDRPSWAYHLGAVLITYFCVNASLRMVAEGPVKYIMLWR
HSLGMVLNLIGVAFYLGLWFDGEGWRNLYHILQASRLMILWNVLHKIGPT
SAEVAKRLEFVFPAVLRASFVLFSVTYSYAVLAYAMYCDTPLGKKPLDSI
ADHSMTQRWLFYKDVVSFESLLQSFASMTDVIMLSNWPIFMDAAADVSNS
WLTKLFFYSFKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028801TPC1