prot_S-dermatodea_contig11320.855.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11320.855.1
Unique Nameprot_S-dermatodea_contig11320.855.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length242
Homology
BLAST of mRNA_S-dermatodea_contig11320.855.1 vs. uniprot
Match: D7FPV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV9_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 3.890e-122
Identity = 201/269 (74.72%), Postives = 217/269 (80.67%), Query Frame = 0
Query:    1 QLARLERLVSKQEELLHDYRPPVHEAPLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSLPGNGGTELINEREDWTPGVDLFEKLGGXXXXXXXXXXXXXXXXXX---------------------------FFGGPEACREFLELNHQLAQALHDDGSEVKTKEALSRYERCMELDPADHVMARRGLVRLLLDAGDADKARAVIDRFPGDRGCELAWSLAAIELVAWSVLEEEGAGEEVAAEALRTACAANPFVAWNVAHREIFDEV 242
            +LARLERLVSKQEELL DYRPPVH APLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSLPG GGTEL+NEREDW  G DLFEKL G   XXXXXXXXXXXXXXX                           F+ GPEACRE+L+LNHQLAQ LHD G E +T+EAL RY+R +ELDP DHV ARRGLVRLLLD GDADKARAVIDRFP DRGCE+AWSLAAIE VAWSVL+E+G+GEEVA +ALR AC ANPFVAWN+AHRE+FDEV
Sbjct:   52 ELARLERLVSKQEELLRDYRPPVHVAPLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSLPGAGGTELVNEREDWEAGEDLFEKLAGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRGRQKGETSGGGFYEGPEACREYLDLNHQLAQRLHDGGKESQTEEALKRYQRSLELDPVDHVNARRGLVRLLLDGGDADKARAVIDRFPDDRGCEMAWSLAAIEFVAWSVLQEDGSGEEVAGKALREACGANPFVAWNIAHREVFDEV 320          
BLAST of mRNA_S-dermatodea_contig11320.855.1 vs. uniprot
Match: A0A835Z3Z8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z8_9STRA)

HSP 1 Score: 179 bits (454), Expect = 9.670e-52
Identity = 113/244 (46.31%), Postives = 145/244 (59.43%), Query Frame = 0
Query:    1 QLARLERLVSKQEELLHDYRPPVHEAPLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSLPGNGGTELINEREDWTP-GVDLFEKLGGXXXXXXXXXXXXXXXXXXFFGGPEACREFLELNHQLAQALHDDGSEVKTKEALSRYERCMELDPADHVMARRGLVRLLLDAGDADKARAVIDRFPG-DRGCELAWSLAAIELVAWSVLEEEGAGEEVAAEALRTACAANPFVAWNVAHREIFDEV 242
            +++RL+R  +KQEELL +Y PP    P  PE +R+RRR+DFYDLDTS W+L GAARPA  +    G E  N    W   G DLF   G                    F    ACR +L+L  QL  A    G   K+K+A+  +ERC+ LDP+D V ARRGLVR L+D   AD+ARA+I+RF   D G  L+WSL AIE ++W +L E+G+ E VAA AL  A AANPFVAW +A  + F +V
Sbjct:   40 EVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPII----GAEPENPH--WQEQGEDLFALKGEA------------------FSSHPACRTYLDLKCQLGGACLAAG---KSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADV 256          
BLAST of mRNA_S-dermatodea_contig11320.855.1 vs. uniprot
Match: A0A061SPC3_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SPC3_9CHLO)

HSP 1 Score: 68.9 bits (167), Expect = 5.920e-10
Identity = 76/249 (30.52%), Postives = 108/249 (43.37%), Query Frame = 0
Query:    9 VSKQEELLHDYRPPVHEAPLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSL---PGNGGTEL---INEREDWT---PGVDLFEKLGGXXXXXXXXXXXXXXXXXXFFGGPEACREFLELNHQLAQALHDDGSEVKTKEALSRYERCMELDPADHVMARRGLVRLLLDAGDADKARAVI---DRF-PGDRGCELAWSLAAIELVAWSVLEEEGAGEEVAAEALRTACAANPFVA----WNVAHREIFD 240
            V+K E  L  +R P   +    E  +KR+R   Y          GAARP DS    P   G ++   ++   DW      V+L E   G                         CR  LEL    A+A  +     ++ +A    ++ M  D +D + AR  L+   +D G   +ARA++   + F P  R     +SLA IE +AW+VLEE  A EEVA  AL+ A +ANPF A    W+ A  E+ D
Sbjct:   65 VAKLEAALSSHREPRENSKELAEAFKKRKRERLY----------GAARPWDSRQPSPHGCGYDIYACMDHCGDWENEPEPVNLLEAHAGRLWEVPCAQPY--------------CRALLEL----AEAQRESD---RSGDAAETLKKLMAADRSDALGARHALLAAYMDDGALGEARALLGDPEAFDPSRRSVPELYSLALIEYIAWAVLEEADASEEVAGSALQAAISANPFAAAFICWHDAFMEVVD 282          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11320.855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FPV9_ECTSI3.890e-12274.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z3Z8_9STRA9.670e-5246.31Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A061SPC3_9CHLO5.920e-1030.52Uncharacterized protein (Fragment) n=1 Tax=Tetrase... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 111..233
e-value: 2.3E-5
score: 25.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 117..194
NoneNo IPR availablePFAMPF14559TPR_19coord: 137..183
e-value: 4.8E-6
score: 27.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11320contigS-dermatodea_contig11320:476..5741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11320.855.1mRNA_S-dermatodea_contig11320.855.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11320 476..5741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11320.855.1 ID=prot_S-dermatodea_contig11320.855.1|Name=mRNA_S-dermatodea_contig11320.855.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=242bp
QLARLERLVSKQEELLHDYRPPVHEAPLDPELKRKRRRRDFYDLDTSHWK
LTGAARPADSLPGNGGTELINEREDWTPGVDLFEKLGGGGGGGGSEQDVE
GGGEGGFFGGPEACREFLELNHQLAQALHDDGSEVKTKEALSRYERCMEL
DPADHVMARRGLVRLLLDAGDADKARAVIDRFPGDRGCELAWSLAAIELV
AWSVLEEEGAGEEVAAEALRTACAANPFVAWNVAHREIFDEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf