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Homology
BLAST of mRNA_S-dermatodea_contig11320.855.1 vs. uniprot
Match: D7FPV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV9_ECTSI) HSP 1 Score: 365 bits (936), Expect = 3.890e-122 Identity = 201/269 (74.72%), Postives = 217/269 (80.67%), Query Frame = 1
Query: 1 QLARLERLVSKQEELLHDYRPPVHEAPLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSLPGNGGTELINEREDWTPGVDLFEKLGGXXXXXXXXXXXXXXXXXX---------------------------FFGGPEACREFLELNHQLAQALHDDGSEVKTKEALSRYERCMELDPADHVMARRGLVRLLLDAGDADKARAVIDRFPGDRGCELAWSLAAIELVAWSVLEEEGAGEEVAAEALRTACAANPFVAWNVAHREIFDEV 726
+LARLERLVSKQEELL DYRPPVH APLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSLPG GGTEL+NEREDW G DLFEKL G XXXXXXXXXXXXXXX F+ GPEACRE+L+LNHQLAQ LHD G E +T+EAL RY+R +ELDP DHV ARRGLVRLLLD GDADKARAVIDRFP DRGCE+AWSLAAIE VAWSVL+E+G+GEEVA +ALR AC ANPFVAWN+AHRE+FDEV
Sbjct: 52 ELARLERLVSKQEELLRDYRPPVHVAPLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSLPGAGGTELVNEREDWEAGEDLFEKLAGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRGRQKGETSGGGFYEGPEACREYLDLNHQLAQRLHDGGKESQTEEALKRYQRSLELDPVDHVNARRGLVRLLLDGGDADKARAVIDRFPDDRGCEMAWSLAAIEFVAWSVLQEDGSGEEVAGKALREACGANPFVAWNIAHREVFDEV 320
BLAST of mRNA_S-dermatodea_contig11320.855.1 vs. uniprot
Match: A0A835Z3Z8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z8_9STRA) HSP 1 Score: 179 bits (454), Expect = 9.670e-52 Identity = 113/244 (46.31%), Postives = 145/244 (59.43%), Query Frame = 1
Query: 1 QLARLERLVSKQEELLHDYRPPVHEAPLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSLPGNGGTELINEREDWTP-GVDLFEKLGGXXXXXXXXXXXXXXXXXXFFGGPEACREFLELNHQLAQALHDDGSEVKTKEALSRYERCMELDPADHVMARRGLVRLLLDAGDADKARAVIDRFPG-DRGCELAWSLAAIELVAWSVLEEEGAGEEVAAEALRTACAANPFVAWNVAHREIFDEV 726
+++RL+R +KQEELL +Y PP P PE +R+RRR+DFYDLDTS W+L GAARPA + G E N W G DLF G F ACR +L+L QL A G K+K+A+ +ERC+ LDP+D V ARRGLVR L+D AD+ARA+I+RF D G L+WSL AIE ++W +L E+G+ E VAA AL A AANPFVAW +A + F +V
Sbjct: 40 EVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPII----GAEPENPH--WQEQGEDLFALKGEA------------------FSSHPACRTYLDLKCQLGGACLAAG---KSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADV 256
BLAST of mRNA_S-dermatodea_contig11320.855.1 vs. uniprot
Match: A0A061SPC3_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SPC3_9CHLO) HSP 1 Score: 68.9 bits (167), Expect = 5.920e-10 Identity = 76/249 (30.52%), Postives = 108/249 (43.37%), Query Frame = 1
Query: 25 VSKQEELLHDYRPPVHEAPLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSL---PGNGGTEL---INEREDWT---PGVDLFEKLGGXXXXXXXXXXXXXXXXXXFFGGPEACREFLELNHQLAQALHDDGSEVKTKEALSRYERCMELDPADHVMARRGLVRLLLDAGDADKARAVI---DRF-PGDRGCELAWSLAAIELVAWSVLEEEGAGEEVAAEALRTACAANPFVA----WNVAHREIFD 720
V+K E L +R P + E +KR+R Y GAARP DS P G ++ ++ DW V+L E G CR LEL A+A + ++ +A ++ M D +D + AR L+ +D G +ARA++ + F P R +SLA IE +AW+VLEE A EEVA AL+ A +ANPF A W+ A E+ D
Sbjct: 65 VAKLEAALSSHREPRENSKELAEAFKKRKRERLY----------GAARPWDSRQPSPHGCGYDIYACMDHCGDWENEPEPVNLLEAHAGRLWEVPCAQPY--------------CRALLEL----AEAQRESD---RSGDAAETLKKLMAADRSDALGARHALLAAYMDDGALGEARALLGDPEAFDPSRRSVPELYSLALIEYIAWAVLEEADASEEVAGSALQAAISANPFAAAFICWHDAFMEVVD 282
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 367.9 |
| Seed ortholog evalue | 3.8e-99 |
| Seed eggNOG ortholog | 2880.D7FPV9 |
| EggNOG OGs | 2C0FH@1,2QU7Q@2759 |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-01_008510.1 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 726 |
| Cds size | 726 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11320.855.1 >prot_S-dermatodea_contig11320.855.1 ID=prot_S-dermatodea_contig11320.855.1|Name=mRNA_S-dermatodea_contig11320.855.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=242bp
QLARLERLVSKQEELLHDYRPPVHEAPLDPELKRKRRRRDFYDLDTSHWK LTGAARPADSLPGNGGTELINEREDWTPGVDLFEKLGGGGGGGGSEQDVE GGGEGGFFGGPEACREFLELNHQLAQALHDDGSEVKTKEALSRYERCMEL DPADHVMARRGLVRLLLDAGDADKARAVIDRFPGDRGCELAWSLAAIELV AWSVLEEEGAGEEVAAEALRTACAANPFVAWNVAHREIFDEV back to topmRNA from alignment at S-dermatodea_contig11320:476..5741- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig11320.855.1 ID=mRNA_S-dermatodea_contig11320.855.1|Name=mRNA_S-dermatodea_contig11320.855.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5266bp|location=Sequence derived from alignment at S-dermatodea_contig11320:476..5741- (Saccorhiza dermatodea SderLu1190fm monoicous) CAGCTGGCCCGATTGGAGCGGCTGGTATCGAAGCAGGAGGAGCTGCTGCA
CGACTACCGACCGCCCGTGCACGAGGCCCCCCTCGACCCGGAGCTGAAAC
GCAAGGTAAGCGCTAACTCGTAGATACCACTATTAATAAGTAGGGTAGCA
TCCAACAATGAGCTGCGATGTACTGTGACATGCTTATATTACATATTAGA
GAGGGAGTCTGTCGATGGAAGGACCAGACATTCGTGGAACGAAATTGGCG
TCAGACCCAACATCGGAGACGCGCGCCCGCCGTGGGGCGAGGGGTTCGAG
GGGAGGGGGGGGCGGGGGGGAGGATATCAGAGTTACGGTACTGTATGTCA
TTTAAGTGCAGCAGGTGGCATATGTTGTCTTGACACAGAGGCGGTGGGAT
CGCACGGTGCGACTTTCCTTGGTTCCTCGGCTCAACCCCCCCCCTCCCCC
CCCGCAAAGGATGATGGCTAGCAACTGGTATCATCCTTGCGAAACGCAGC
CTGGCCGGCGAAAACCCGGCATATCGCTCCGCCCCGGCATTGTTGGGACG
CGTGGTCTATGTCCGTTTAGATACGACATGCGTTTTATAAAAGTACACCC
CCCCCTTCACCGCGCCCCCGCCCCGTCCCCCCGCCCGCCCACCCCGTTGA
TTACCCCCCCCCTCGCATTTCGTCCCGGCACAGCGTCGTCGGCGCGATTT
TTACGACCTCGACACCTCCCACTGGAAGCTGACGGGTGCGGCGAGGCCCG
CGGACTCCCTTCCTGGCAACGGGGGAACGGAGCTCATCAACGAGAGGGAA
GACTGGACACCGGGTGTGGATTTGTTCGAGAAGTTGGGAGGCGGTGGGGG
CGGGGGCGGCAGCGAGCAGGACGTGGAAGGTGGTGGCGAAGGAGGGTTTT
TCGGTGGGCCGGAGGCGTGTCGGGAATTCCTTGGTGAGATGTAGAGACAA
GAGAGATATAACGGCTAACACTTGATAGGCTTTTTTGTACTAGCATCATA
CATGCAGCCGATCGACCTCTCGACTCGGATCCCGCTCGTGGTCTTACGCT
AATCAGGACCAGGACCAAATGTCCCCACCATGAAGGAATACTAGGTATAC
TGCTGTACGCAAACAAATATCGTACCGAATCAAGCAGAACAAGGTCTGGA
ACAACAGTTGTCGACAAATCTTAATCTTGCGATCTGTACAATGTTTTACC
TTTGCAATTTTTTTTTTAAGATCCAAAAGAACTGAGGTCTGCTGGCTACA
AGCAAGTGTAAGTTTAACTTTGCAAAACAAATTTGAAAGATCTGCTATGA
ATAAATTTGGTCCTGTTAACCTAATGATCGTTCGTATGATAGTATGAGTC
ATCACAGGGTAACGGAAAAAATCCTCTTTTCTCTGCACATATACAAGTAT
AGATAGGTGTACAGTACGGATTTCTACACATGGCGGGTGGTGGAAGACTG
ATTTTATCGGCTTTGCCGATTGAACTCATCCCCGCGCTTGCTGTTGCGCG
ATTCCAGGGGGGGGGGAAGCCTTTTGTTTCATATTCTGCATGATACAATG
TGAATATTAGCATCATACAGCATTACCATATTCTGTGTATTTCTGTCAAT
ACTGCTGTTTGTACCTTTGCCGATGGCATGCATGGCAGTTTTGTTTTTTC
AGCGCGTCAAGTCTACACATCAACTGCCGTACTACTGTATAATACTCTAC
TGTAATAGTACGCGACGGACAGGAAGGGAAAAGCACATCGTTGTTGCACC
TATGGTTGTTGGTTGAGCACCTGATAATGTATTTTGTGATGAATTTGAAT
TAAGGTGGTGTTTTCACTGAAAATGTCGTCCTCCTGTCATACGTATGTTG
ATGTCTTCCGTTTTCTTCCCCCCCCCCCCCCCCCCCCCCTTTTTTTTTTT
TTTTTCTTCCCTCTTCCCCCCCCTCCCCAAAACACCAGCACCCCCCCCGC
CCCCCCCCCCACCAAGGGGAGNNNNNNNNNNTTTTTTTGTTTAATTTGAA
TTAAGTGTGTTTTTTACTTTAAATGTTCCTCTCCTCTCATACATTTGTTT
ATTTTTTCCCTTTTCTTCCCCCCCCCCCCCCCTTTTCCTTCTTTCTTTTC
TGCCGGCCTTTCCCCGCACAGAACTCAACCACCAGCTGGCCCAAGCGCTG
CACGACGATGGGAGCGAGGTGAAGACGAAGGAGGCGTTATCGCGATACGA
AAGGTAAAGGTAAATGTAAAGGTAAAGGTGTCGCTACAAGCATAACCAAA
GCGTAGAGCTGTATATTATATATATTAATATATACCTCTTTGCGTGTCTG
ACCACAAGTCGGGTCGGATTAAGTCGATCGGCTATACGTGTGCAAATAAA
AAATAAAAACAAATAAAATGCGCATCACACATGCAACATGGTAGTATCAT
ACCACCGTTTTCCCCCCCTATGATAACTCATTTTTGTGTTTTTGTGTGGG
GTGTTGGCCGCGCGCTGGGCAACGTGTGCTATTAGCACGTATAGCTCCTT
CTACCTGTTGTGTTATTAGCTACTGCACGCACCCAAGCACCAAGTATACT
GTAGTATGTAGTGTTAGGTCGCACCGCGGGTGGTCCTCTCCGCTGGCTTT
TACGCATACGGTACTTGTAGGTTTGCGGAGAATTAATGATATACTCTCGT
TTGCACAAAAAATATTTTAAAAGTGCTTGCTTGTAGAGGCTTCCTTTTCG
TTGTTGGTGGCAAGTGCTGCCTGCAAGCACCCGCCCCCCTGTTTTCTGTT
GCACGTACACGTAGGAAATACTCTACTACTGTATACATTTCACGTTACAT
TTTACACATATCATACGGCAGAGCCTTCGTACACGACACACCGCCGTCGC
CGGCGTGCTCGTTACAGACATATGGTATTTTTTATTTATGAATACCACAA
ACCTTTTTACACCTTTTTTTTTAACAGCTTTTTAGAGTTAAGCTTTCATT
GCCGAATTTCCTATACAATTCGTGATGTTCAATTGTCATGCAGTATATAG
GGGTGTTAGAGTCGTATACCTTACAGGGTACCGTAGTTTCTGCCAACGCA
CACCTCACGGGCGTAGCCGTGGCTATTAATACCCACTAGTATACATGTAT
TTGCGGCCCGGTTCCGTGTCAAACGTGGCAACCCCCTCCCCCAAAAAAAA
CTCCCCCCCCCCCCCGCCCCTAAAACAGATGCATGGAGCTCGACCCTGCG
GATCATGTGATGGCACGGCGAGGATTGGTCCGGCTCCTGTTGGACGCCGG
TGACGCGGACAAGGCCCGTGCCGTCATAGACAGGTAGACAGTAGTGAAAA
CGGGAGGGAGGGGACAAACGAATCAAAGTGATAAATGTGTAGAGCTATTT
ATGTATATATTTATATATATGCGCGCAAGTATTTAGTTCGACTAACGCCG
CCTAGCCCCAGTGGAGCGCAAGCCAAGGCCAATTGTACCGACTGGTGCAC
GCCCGTAGCGTTTTGGTTGTGCGCACACGATAATATGATAACACCGACAT
GTGAGTTGTGTCGAAATAATTACACATTGTATGGTTCGATTGTTAGCTCC
GTCGATCAAGTAGACGGAAGGAAGTACTTCACCCGCATTCGCTGATACTA
TATGGTGGGTAGCCACGGCTATGCTCGTGAGGTTGTGCGGTGGCACAAAT
TACTAATCTGTAATCTACCACTCTAGAATCCCCATGACATTTGGCATCAC
GAATTGTATAGGAAATTCGGCATCACAGGTCAACTCTACATTGCTATTGA
AAAACGTGCAGCGCGGTAGTATTCGTTTATACTGGTACAGAATACTGTAC
GTGTTTTGTTTTTGGCGGTGGAAGTACGTTGTGGCGTACGTGGTGTTATT
TTTGTCTCTTCTGGTCATGTGAGGCTCTCGTAGTCCCTGCCTGGCTTTGA
GACCCGTCGTCGACAAGGCGGGGGATGATAAGACACAATAGCATCATATG
TAAGGACTGAGCCTCCATAGGTGTAGCTTGGACCATCTTCCCTCTTGAAA
AGGCGGGACCCCAACGCTCTAATAGCTCTGTTTCTGAACTCTTTCATGTT
TTTAGAGGATTATAAATAAGTAAATATGAAATCAACCAAACATCCTGCCG
TCAAAATTGCGAAAACAAATTGAAACTCACGACCGTTCTTCTTCTTGACT
CACAAAGCACCATGTTCCAAGAGCTACATACATTAATGTCATGCTCGTAT
CTTAATGCTACGCTTTCAGCCAGACAGGAGTGACGTTTCCATCATGACCC
CGTTTTAGCATATCATGCACAACGTAAACCTCCACTGAGTTATAGCTTGG
GCCAACATATATCCTCTCTATTATTACAAGATAAAGCTGGAACCCAACAC
TCGCTCTGTGTTTTATCAATATTTTCTCTTTTCGGGGGGAAAACCTTAAA
TGCACCTCAGACGGGTCATCGAGGTGTAGCTGGGACAGGACAGAGTCGTT
TCATCGGTGATCGTGGAGTAAGCTGGGTGGGGGTCATCCTTCGCGTGCGC
GCCCGGACGTCGGGGCGAAAACTAGTAATACCGATGTTGTTCTCGGTCTA
TTTTTTTCCCTGGCCAGCCTCGCCGCACGTATCGTATGATAGAAATGCCG
CAGAAAGCAGTATCTAAGCGAAACTCGAAACTCGACATCTCACAACAGTG
TTATTTATACTGTTAGCGCACACCACTGCACGTTTACTGCTGTAGCATGG
ACGTCACCGGTAGTGTCGATGGTGGCCCTTTCCCCCCGCAAGTCCTTATG
TATAGGCATCAGCGCCAAGGTTTTTTATTTTATTTTATTTTGCTGCATGT
TGACTAATATTACTGCTGTGTAGCGGCAGGCGCAAGCAAGCACGCACGTA
TCTCCTCCCCTCGTATTAATAGCACTAAAGTACTGTAACATATATGTATA
CTTAGTATCGTACGGTTCCACGTTTCCTCGTTCCAATTCTGTCCACCCTT
GCGGTGCTACTTGCTGCGCTCGTCTGCGCTGCTTTGCGCTGCTCTGCTCT
GCGCTGTGCTGTGCTGTGCTGTGCTGTGCTGACCCTGTCTCGAACGCGGC
GGCCGCTTCCTCTTCACCTTCTCGCGCCGCAGGTTTCCTGGCGATCGGGG
GTGCGAGCTGGCTTGGTCTCTCGCCGCGATCGAGCTGGTGGCGTGGTCCG
TCCTGGAGGAAGAGGGGGCCGGGGAGGAGGTCGCGGCAGAGGCTCTCCGC
ACGGCGTGCGCGGCCAACCCTTTCGTGGCGTGGAACGTTGCACACAGGGA
GATTTTCGACGAGGTG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig11320:476..5741- >mRNA_S-dermatodea_contig11320.855.1 ID=mRNA_S-dermatodea_contig11320.855.1|Name=mRNA_S-dermatodea_contig11320.855.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1452bp|location=Sequence derived from alignment at S-dermatodea_contig11320:476..5741- (Saccorhiza dermatodea SderLu1190fm monoicous) CAGCTGGCCCGATTGGAGCGGCTGGTATCGAAGCAGGAGGAGCTGCTGCA CGACTACCGACCGCCCGTGCACGAGGCCCCCCTCGACCCGGAGCTGAAAC GCAAGCAGCTGGCCCGATTGGAGCGGCTGGTATCGAAGCAGGAGGAGCTG CTGCACGACTACCGACCGCCCGTGCACGAGGCCCCCCTCGACCCGGAGCT GAAACGCAAGCGTCGTCGGCGCGATTTTTACGACCTCGACACCTCCCACT GGAAGCTGACGGGTGCGGCGAGGCCCGCGGACTCCCTTCCTGGCAACGGG GGAACGGAGCTCATCAACGAGAGGGAAGACTGGACACCGGGTGTGGATTT GTTCGAGAAGTTGGGAGGCGGTGGGGGCGGGGGCGGCAGCGAGCAGGACG TGGAAGGTGGTGGCGAAGGAGGGTTTTTCGGTGGGCCGGAGGCGTGTCGG GAATTCCTTGCGTCGTCGGCGCGATTTTTACGACCTCGACACCTCCCACT GGAAGCTGACGGGTGCGGCGAGGCCCGCGGACTCCCTTCCTGGCAACGGG GGAACGGAGCTCATCAACGAGAGGGAAGACTGGACACCGGGTGTGGATTT GTTCGAGAAGTTGGGAGGCGGTGGGGGCGGGGGCGGCAGCGAGCAGGACG TGGAAGGTGGTGGCGAAGGAGGGTTTTTCGGTGGGCCGGAGGCGTGTCGG GAATTCCTTGAACTCAACCACCAGCTGGCCCAAGCGCTGCACGACGATGG GAGCGAGGTGAAGACGAAGGAGGCGTTATCGCGATACGAAAGAACTCAAC CACCAGCTGGCCCAAGCGCTGCACGACGATGGGAGCGAGGTGAAGACGAA GGAGGCGTTATCGCGATACGAAAGATGCATGGAGCTCGACCCTGCGGATC ATGTGATGGCACGGCGAGGATTGGTCCGGCTCCTGTTGGACGCCGGTGAC GCGGACAAGGCCCGTGCCGTCATAGACAGATGCATGGAGCTCGACCCTGC GGATCATGTGATGGCACGGCGAGGATTGGTCCGGCTCCTGTTGGACGCCG GTGACGCGGACAAGGCCCGTGCCGTCATAGACAGGTTTCCTGGCGATCGG GGGTGCGAGCTGGCTTGGTCTCTCGCCGCGATCGAGCTGGTGGCGTGGTC CGTCCTGGAGGAAGAGGGGGCCGGGGAGGAGGTCGCGGCAGAGGCTCTCC GCACGGCGTGCGCGGCCAACCCTTTCGTGGCGTGGAACGTTGCACACAGG GAGATTTTCGACGAGGTGGTTTCCTGGCGATCGGGGGTGCGAGCTGGCTT GGTCTCTCGCCGCGATCGAGCTGGTGGCGTGGTCCGTCCTGGAGGAAGAG GGGGCCGGGGAGGAGGTCGCGGCAGAGGCTCTCCGCACGGCGTGCGCGGC CAACCCTTTCGTGGCGTGGAACGTTGCACACAGGGAGATTTTCGACGAGG TG back to top
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