prot_S-dermatodea_contig11300.840.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11300.840.1
Unique Nameprot_S-dermatodea_contig11300.840.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length172
Homology
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: A0A6H5KNW1_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW1_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 5.230e-97
Identity = 145/169 (85.80%), Postives = 156/169 (92.31%), Query Frame = 0
Query:    1 MDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 169
            MDRV  GGAD D VK++GLRKVYP S GAKVAV +TSLGIPRGECFGLLGINGAGKSSTLAILSGELP TTGSA+LSGFDV KNPEEIHRLVGYCPQFDALFETLTGREHLALYA+IKGI  +KR AAV++KIEEMGL+QY DRPAGGYSGGNKRKLSVA+A+IGDPQI
Sbjct:   70 MDRVAGGGADNDVVKVKGLRKVYPTSGGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIKGIPADKRSAAVDQKIEEMGLKQYADRPAGGYSGGNKRKLSVAMAMIGDPQI 238          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: D7FZE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 3.530e-89
Identity = 145/169 (85.80%), Postives = 156/169 (92.31%), Query Frame = 0
Query:    1 MDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 169
            MDRV  GGAD D VK++GLRKVYP S GAKVAV +TSLGIPRGECFGLLGINGAGKSSTLAILSGELP TTGSA+LSGFDV KNPEEIHRLVGYCPQFDALFETLTGREHLALYA+IKGI  +KR AAV++KIEEMGL+QY DRPAGGYSGGNKRKLSVA+A+IGDPQI
Sbjct: 1532 MDRVAGGGADNDVVKVKGLRKVYPASGGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIKGIPADKRSAAVDQKIEEMGLKQYADRPAGGYSGGNKRKLSVAMAMIGDPQI 1700          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: A0A6H5L5M8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M8_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 1.060e-86
Identity = 141/169 (83.43%), Postives = 151/169 (89.35%), Query Frame = 0
Query:    1 MDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 169
            MDRV  G AD D VK+ GLRKVYPVS+GAKVAV +TSLGIPRGECFGLLGINGAGKSSTLAILSGELP TTGSA L GFDV KNPEEIHRLVGYCPQFDALFETLTGREHLALYA IKGI  +KR AAV +KIEEMGL +Y +RPAGGYSGGNKRKLSVA+A+IGDPQ+
Sbjct:  635 MDRVATGAADNDVVKVAGLRKVYPVSNGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYAAIKGIPADKRSAAVNQKIEEMGLTRYAERPAGGYSGGNKRKLSVAMAMIGDPQV 803          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: D7FZE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 1.110e-85
Identity = 142/169 (84.02%), Postives = 151/169 (89.35%), Query Frame = 0
Query:    1 MDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 169
            MDRV  G AD D VK+ GLRKVYPVS+GAKVAV +TSLGIPRGECFGLLGINGAGKSSTLAILSGELP TTGSA L GFDV KNPEEIHRLVGYCPQFDALFETLTGREHLALYA IKGI  +KR AAV +KIEEMGL +Y +RPAGGYSGGNKRKLSVA+A+IGDPQI
Sbjct: 1552 MDRVAAGAADNDVVKVAGLRKVYPVSNGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYAAIKGIPADKRSAAVNQKIEEMGLTRYAERPAGGYSGGNKRKLSVAMAMIGDPQI 1720          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: D7FZA6_ECTSI (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA6_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 1.130e-69
Identity = 118/168 (70.24%), Postives = 135/168 (80.36%), Query Frame = 0
Query:    2 DRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 169
            +RV  GG D DAVKIEG+ KVYP  +GAKVAV +TSLGIP+G+CFGLLGINGAGKSS L+ILSG +PAT G+A L G DV K PE IHRL+GYCPQFDALFETLTGREHL LYA IKGI   + + A    I ++GL QY D+ AG YSGGNKRKLSVA+A+IGDPQI
Sbjct: 1555 ERVRQGGGDGDAVKIEGVTKVYPTHAGAKVAVKSTSLGIPKGQCFGLLGINGAGKSSLLSILSGGIPATAGAASLGGHDVGKEPEAIHRLMGYCPQFDALFETLTGREHLRLYAAIKGIPAAEVEEAASTMITDLGLGQYADKLAGSYSGGNKRKLSVAVAMIGDPQI 1722          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: A0A6H5JVX0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX0_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 5.130e-68
Identity = 114/168 (67.86%), Postives = 130/168 (77.38%), Query Frame = 0
Query:    2 DRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 169
            +RV  GG D DAVKIEG+ KVYP  +GAKVAV +TSLGIP+G+CFGLLGINGAGKSS L+ILSG +PAT G+A L G DV K PE IHRL+GYCPQFDALFETLTGREHL LYA IK         A    I ++GL  Y D+ AG YSGGNKRKLSVA+A+IG+PQI
Sbjct:  136 ERVRQGGGDGDAVKIEGVTKVYPTHAGAKVAVKSTSLGIPKGQCFGLLGINGAGKSSLLSILSGGIPATAGAASLGGHDVGKEPEAIHRLMGYCPQFDALFETLTGREHLRLYAAIK---------AASTMITDLGLGHYADKLAGSYSGGNKRKLSVAVAMIGNPQI 294          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: A0A7S3XYR3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYR3_HETAK)

HSP 1 Score: 199 bits (506), Expect = 5.960e-56
Identity = 98/171 (57.31%), Postives = 126/171 (73.68%), Query Frame = 0
Query:    2 DRVMHGGADRDAVKIEGLRKVYP---VSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 169
            DRV+ GGA+ D ++I  +RK +P      G K AV   SLGIPRG+CFGLLGINGAGK++TL ILSGE P T G+A L+G ++++NPEE HRL+GYCPQFDA+F +LTGRE+L LY  +KGI        +E+ I+ M L +Y DR +G YSGGNKRKLSV IA+IG P++
Sbjct: 1542 DRVLGGGAEGDVIRIHRIRKAFPDGPCGRGYKEAVRGLSLGIPRGQCFGLLGINGAGKTTTLTILSGEQPPTEGAAFLAGLNIAENPEEAHRLIGYCPQFDAIFGSLTGRENLWLYGRLKGIPKKYLGELIEQTIQMMSLTEYADRLSGTYSGGNKRKLSVGIAMIGGPEL 1712          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: UPI001EB1D55A (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=UPI001EB1D55A)

HSP 1 Score: 188 bits (477), Expect = 6.930e-56
Identity = 95/167 (56.89%), Postives = 120/167 (71.86%), Query Frame = 0
Query:    3 RVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 169
            RV  GGAD DAVK+ GLRKVYP   G K+AV N S G+ RGECFG LGINGAGK++T+ +L+G++  + G+A L GFD+     E+ R +GYCPQFDALF+ LT REHL L+  IKG+  N  D  V EKI ++ L  + ++ AG  SGGNKRKLSVAIA+IG+P I
Sbjct:   13 RVACGGADEDAVKLMGLRKVYP---GGKIAVRNLSFGLKRGECFGFLGINGAGKTTTMKMLTGDVHPSHGTATLGGFDILSQQIEVRRQIGYCPQFDALFDLLTVREHLELFGAIKGVPQNLLDRVVTEKIHQLNLTDFENKLAGSLSGGNKRKLSVAIAMIGNPAI 176          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: A0A7R9U9S9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9S9_9STRA)

HSP 1 Score: 198 bits (504), Expect = 8.150e-56
Identity = 100/169 (59.17%), Postives = 123/169 (72.78%), Query Frame = 0
Query:    2 DRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNK-RDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 169
            +RV+ GGAD D V +  LRKV+P   G KVAV   S GIPRGECFG LGINGAGKS+TL+ILSGE P T+G+A+++GFD+  N  +I R +GYCPQFDAL E LT REHL LYA IKG+      +  V+ K+++M L  + D+ AG  SGGNKRKLSVAIA+IG P I
Sbjct:  584 NRVLDGGADGDVVCLRQLRKVFPTPVGPKVAVRKLSFGIPRGECFGFLGINGAGKSTTLSILSGEFPPTSGTAYIAGFDIQHNQGKIRRRIGYCPQFDALLELLTVREHLELYARIKGVPEGDLMERVVQGKLKQMDLNAFADKAAGSLSGGNKRKLSVAIAMIGGPSI 752          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: A0A7S1UE30_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE30_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.720e-55
Identity = 97/169 (57.40%), Postives = 122/169 (72.19%), Query Frame = 0
Query:    2 DRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNK-RDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 169
            +RV  GGAD D V++E LRKV+P   G KVAV + S GIPRGECFG LGINGAGKS+TLAILSGE P T+G+A ++GFD+  +   I R +GYCPQFDAL E LT  EHL LYA IKG+   +     V  K+ +M L ++ D+ AG  SGGNKRKLS+ +A+IGDP++
Sbjct:  964 ERVAGGGADDDVVRLERLRKVFPTPVGPKVAVKHMSFGIPRGECFGFLGINGAGKSTTLAILSGEFPPTSGTAFIAGFDIQADQSRIRRRIGYCPQFDALLELLTVSEHLELYARIKGVPEGEPMQRVVAGKLRQMDLEKFADKAAGSLSGGNKRKLSLGVALIGDPEV 1132          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNW1_9PHAE5.230e-9785.80ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FZE8_ECTSI3.530e-8985.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5M8_9PHAE1.060e-8683.43ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FZE9_ECTSI1.110e-8584.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZA6_ECTSI1.130e-6970.24ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ect... [more]
A0A6H5JVX0_9PHAE5.130e-6867.86ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S3XYR3_HETAK5.960e-5657.31Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
UPI001EB1D55A6.930e-5656.89Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A7R9U9S9_9STRA8.150e-5659.17Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UE30_9STRA2.720e-5557.40Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 34..169
e-value: 7.8E-21
score: 75.0
NoneNo IPR availableGENE3D3.40.50.300coord: 2..170
e-value: 3.5E-39
score: 136.7
IPR026082ABC transporter APANTHERPTHR19229ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCAcoord: 12..169
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11300contigS-dermatodea_contig11300:1223..2451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11300.840.1mRNA_S-dermatodea_contig11300.840.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11300 1196..2451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11300.840.1 ID=prot_S-dermatodea_contig11300.840.1|Name=mRNA_S-dermatodea_contig11300.840.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=172bp
MDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLG
INGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDA
LFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYS
GGNKRKLSVAIAIIGDPQIRRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR026082ABCA
IPR027417P-loop_NTPase