mRNA_S-dermatodea_contig11300.840.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11300.840.1
Unique NamemRNA_S-dermatodea_contig11300.840.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: A0A6H5KNW1_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW1_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 1.740e-100
Identity = 151/178 (84.83%), Postives = 163/178 (91.57%), Query Frame = 1
Query:    1 EIDEDVKTEMDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 534
            EID DV+ EMDRV  GGAD D VK++GLRKVYP S GAKVAV +TSLGIPRGECFGLLGINGAGKSSTLAILSGELP TTGSA+LSGFDV KNPEEIHRLVGYCPQFDALFETLTGREHLALYA+IKGI  +KR AAV++KIEEMGL+QY DRPAGGYSGGNKRKLSVA+A+IGDPQI
Sbjct:   61 EIDADVRAEMDRVAGGGADNDVVKVKGLRKVYPTSGGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIKGIPADKRSAAVDQKIEEMGLKQYADRPAGGYSGGNKRKLSVAMAMIGDPQI 238          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: D7FZE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 4.680e-93
Identity = 152/178 (85.39%), Postives = 164/178 (92.13%), Query Frame = 1
Query:    1 EIDEDVKTEMDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 534
            EIDEDV+ EMDRV  GGAD D VK++GLRKVYP S GAKVAV +TSLGIPRGECFGLLGINGAGKSSTLAILSGELP TTGSA+LSGFDV KNPEEIHRLVGYCPQFDALFETLTGREHLALYA+IKGI  +KR AAV++KIEEMGL+QY DRPAGGYSGGNKRKLSVA+A+IGDPQI
Sbjct: 1523 EIDEDVRAEMDRVAGGGADNDVVKVKGLRKVYPASGGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIKGIPADKRSAAVDQKIEEMGLKQYADRPAGGYSGGNKRKLSVAMAMIGDPQI 1700          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: A0A6H5L5M8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M8_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 2.930e-90
Identity = 147/177 (83.05%), Postives = 158/177 (89.27%), Query Frame = 1
Query:    4 IDEDVKTEMDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 534
            IDEDV+ EMDRV  G AD D VK+ GLRKVYPVS+GAKVAV +TSLGIPRGECFGLLGINGAGKSSTLAILSGELP TTGSA L GFDV KNPEEIHRLVGYCPQFDALFETLTGREHLALYA IKGI  +KR AAV +KIEEMGL +Y +RPAGGYSGGNKRKLSVA+A+IGDPQ+
Sbjct:  627 IDEDVRAEMDRVATGAADNDVVKVAGLRKVYPVSNGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYAAIKGIPADKRSAAVNQKIEEMGLTRYAERPAGGYSGGNKRKLSVAMAMIGDPQV 803          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: D7FZE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 1.750e-88
Identity = 147/177 (83.05%), Postives = 158/177 (89.27%), Query Frame = 1
Query:    4 IDEDVKTEMDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 534
            ID+DV+ EMDRV  G AD D VK+ GLRKVYPVS+GAKVAV +TSLGIPRGECFGLLGINGAGKSSTLAILSGELP TTGSA L GFDV KNPEEIHRLVGYCPQFDALFETLTGREHLALYA IKGI  +KR AAV +KIEEMGL +Y +RPAGGYSGGNKRKLSVA+A+IGDPQI
Sbjct: 1544 IDKDVRAEMDRVAAGAADNDVVKVAGLRKVYPVSNGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYAAIKGIPADKRSAAVNQKIEEMGLTRYAERPAGGYSGGNKRKLSVAMAMIGDPQI 1720          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: D7FZA6_ECTSI (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA6_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 4.500e-72
Identity = 123/177 (69.49%), Postives = 141/177 (79.66%), Query Frame = 1
Query:    4 IDEDVKTEMDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 534
            +DEDV  E +RV  GG D DAVKIEG+ KVYP  +GAKVAV +TSLGIP+G+CFGLLGINGAGKSS L+ILSG +PAT G+A L G DV K PE IHRL+GYCPQFDALFETLTGREHL LYA IKGI   + + A    I ++GL QY D+ AG YSGGNKRKLSVA+A+IGDPQI
Sbjct: 1546 LDEDVARETERVRQGGGDGDAVKIEGVTKVYPTHAGAKVAVKSTSLGIPKGQCFGLLGINGAGKSSLLSILSGGIPATAGAASLGGHDVGKEPEAIHRLMGYCPQFDALFETLTGREHLRLYAAIKGIPAAEVEEAASTMITDLGLGQYADKLAGSYSGGNKRKLSVAVAMIGDPQI 1722          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: A0A6H5JVX0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX0_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 1.130e-70
Identity = 119/177 (67.23%), Postives = 136/177 (76.84%), Query Frame = 1
Query:    4 IDEDVKTEMDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 534
            +DEDV  E +RV  GG D DAVKIEG+ KVYP  +GAKVAV +TSLGIP+G+CFGLLGINGAGKSS L+ILSG +PAT G+A L G DV K PE IHRL+GYCPQFDALFETLTGREHL LYA IK         A    I ++GL  Y D+ AG YSGGNKRKLSVA+A+IG+PQI
Sbjct:  127 LDEDVAREAERVRQGGGDGDAVKIEGVTKVYPTHAGAKVAVKSTSLGIPKGQCFGLLGINGAGKSSLLSILSGGIPATAGAASLGGHDVGKEPEAIHRLMGYCPQFDALFETLTGREHLRLYAAIK---------AASTMITDLGLGHYADKLAGSYSGGNKRKLSVAVAMIGNPQI 294          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: UPI001EB1D55A (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=UPI001EB1D55A)

HSP 1 Score: 198 bits (504), Expect = 8.520e-60
Identity = 102/178 (57.30%), Postives = 128/178 (71.91%), Query Frame = 1
Query:    1 EIDEDVKTEMDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 534
            EIDEDV+ E  RV  GGAD DAVK+ GLRKVYP   G K+AV N S G+ RGECFG LGINGAGK++T+ +L+G++  + G+A L GFD+     E+ R +GYCPQFDALF+ LT REHL L+  IKG+  N  D  V EKI ++ L  + ++ AG  SGGNKRKLSVAIA+IG+P I
Sbjct:    2 EIDEDVEREAQRVACGGADEDAVKLMGLRKVYP---GGKIAVRNLSFGLKRGECFGFLGINGAGKTTTMKMLTGDVHPSHGTATLGGFDILSQQIEVRRQIGYCPQFDALFDLLTVREHLELFGAIKGVPQNLLDRVVTEKIHQLNLTDFENKLAGSLSGGNKRKLSVAIAMIGNPAI 176          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: A0A2P4YAL6_9STRA (ABC transporter lipid exporter ABCA1 family (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YAL6_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.960e-58
Identity = 102/178 (57.30%), Postives = 131/178 (73.60%), Query Frame = 1
Query:    1 EIDEDVKTEMDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 534
            +IDEDVK E DRV  GGAD DAVK+ GLRKVYP   G KVAV + S G+ RGECFG LGINGAGK++T+ +L+G++P ++G+A L GF++     E+ R +GYCPQFDALF+ LT REHL L+  IKG+  +  D  V EKI+++ L  +  + AG  SGGNKRKLSVAIA+IG+P I
Sbjct:  150 DIDEDVKKEADRVASGGADGDAVKLMGLRKVYP---GGKVAVRDLSFGLQRGECFGFLGINGAGKTTTMKMLTGDVPPSSGTATLGGFNILTEQIEVRRQIGYCPQFDALFDLLTVREHLELFGAIKGVPQSSLDRVVMEKIQQLNLSDFEHKLAGSLSGGNKRKLSVAIAMIGNPAI 324          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: A0A7S3XYR3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYR3_HETAK)

HSP 1 Score: 206 bits (523), Expect = 4.370e-58
Identity = 103/181 (56.91%), Postives = 132/181 (72.93%), Query Frame = 1
Query:    1 EIDEDVKTEMDRVMHGGADRDAVKIEGLRKVYP---VSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 534
            E+D DV  E DRV+ GGA+ D ++I  +RK +P      G K AV   SLGIPRG+CFGLLGINGAGK++TL ILSGE P T G+A L+G ++++NPEE HRL+GYCPQFDA+F +LTGRE+L LY  +KGI        +E+ I+ M L +Y DR +G YSGGNKRKLSV IA+IG P++
Sbjct: 1532 EVDADVAEEEDRVLGGGAEGDVIRIHRIRKAFPDGPCGRGYKEAVRGLSLGIPRGQCFGLLGINGAGKTTTLTILSGEQPPTEGAAFLAGLNIAENPEEAHRLIGYCPQFDAIFGSLTGRENLWLYGRLKGIPKKYLGELIEQTIQMMSLTEYADRLSGTYSGGNKRKLSVGIAMIGGPEL 1712          
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Match: A0A7R9U9S9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9S9_9STRA)

HSP 1 Score: 205 bits (521), Expect = 5.370e-58
Identity = 105/177 (59.32%), Postives = 128/177 (72.32%), Query Frame = 1
Query:    7 DEDVKTEMDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLGINGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDALFETLTGREHLALYATIKGIFVNK-RDAAVEEKIEEMGLRQYCDRPAGGYSGGNKRKLSVAIAIIGDPQI 534
            DEDV  E +RV+ GGAD D V +  LRKV+P   G KVAV   S GIPRGECFG LGINGAGKS+TL+ILSGE P T+G+A+++GFD+  N  +I R +GYCPQFDAL E LT REHL LYA IKG+      +  V+ K+++M L  + D+ AG  SGGNKRKLSVAIA+IG P I
Sbjct:  576 DEDVAAEANRVLDGGADGDVVCLRQLRKVFPTPVGPKVAVRKLSFGIPRGECFGFLGINGAGKSTTLSILSGEFPPTSGTAYIAGFDIQHNQGKIRRRIGYCPQFDALLELLTVREHLELYARIKGVPEGDLMERVVQGKLKQMDLNAFADKAAGSLSGGNKRKLSVAIAMIGGPSI 752          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11300.840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNW1_9PHAE1.740e-10084.83ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FZE8_ECTSI4.680e-9385.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5M8_9PHAE2.930e-9083.05ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FZE9_ECTSI1.750e-8883.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZA6_ECTSI4.500e-7269.49ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ect... [more]
A0A6H5JVX0_9PHAE1.130e-7067.23ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
UPI001EB1D55A8.520e-6057.30Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A2P4YAL6_9STRA2.960e-5857.30ABC transporter lipid exporter ABCA1 family (Fragm... [more]
A0A7S3XYR3_HETAK4.370e-5856.91Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7R9U9S9_9STRA5.370e-5859.32Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11300contigS-dermatodea_contig11300:1196..2451 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score295.0
Seed ortholog evalue2.2e-77
Seed eggNOG ortholog2880.D7FZE8
KEGG koko:K05643,ko:K05645
KEGG TC3.A.1.211
KEGG Pathwayko02010,map02010
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009653,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030587,GO:0031288,GO:0032502,GO:0033036,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044464,GO:0048856,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0071702,GO:0090702,GO:0099120
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0059@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categoryother localisation
Exons4
Model size545
Cds size516
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11300.840.1prot_S-dermatodea_contig11300.840.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11300 1223..2451 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924196.1745942-UTR-S-dermatodea_contig11300:1195..12221622924196.1745942-UTR-S-dermatodea_contig11300:1195..1222Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11300 1196..1222 +
1694079084.5697167-UTR-S-dermatodea_contig11300:1195..12221694079084.5697167-UTR-S-dermatodea_contig11300:1195..1222Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11300 1196..1222 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924196.1923926-CDS-S-dermatodea_contig11300:1222..12671622924196.1923926-CDS-S-dermatodea_contig11300:1222..1267Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11300 1223..1267 +
1694079084.5972736-CDS-S-dermatodea_contig11300:1222..12671694079084.5972736-CDS-S-dermatodea_contig11300:1222..1267Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11300 1223..1267 +
1622924196.2023509-CDS-S-dermatodea_contig11300:1509..16571622924196.2023509-CDS-S-dermatodea_contig11300:1509..1657Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11300 1510..1657 +
1694079084.6066604-CDS-S-dermatodea_contig11300:1509..16571694079084.6066604-CDS-S-dermatodea_contig11300:1509..1657Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11300 1510..1657 +
1622924196.2173254-CDS-S-dermatodea_contig11300:1911..20721622924196.2173254-CDS-S-dermatodea_contig11300:1911..2072Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11300 1912..2072 +
1694079084.615312-CDS-S-dermatodea_contig11300:1911..20721694079084.615312-CDS-S-dermatodea_contig11300:1911..2072Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11300 1912..2072 +
1622924196.2267625-CDS-S-dermatodea_contig11300:2289..24511622924196.2267625-CDS-S-dermatodea_contig11300:2289..2451Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11300 2290..2451 +
1694079084.6240096-CDS-S-dermatodea_contig11300:2289..24511694079084.6240096-CDS-S-dermatodea_contig11300:2289..2451Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11300 2290..2451 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11300.840.1

>prot_S-dermatodea_contig11300.840.1 ID=prot_S-dermatodea_contig11300.840.1|Name=mRNA_S-dermatodea_contig11300.840.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=172bp
MDRVMHGGADRDAVKIEGLRKVYPVSSGAKVAVTNTSLGIPRGECFGLLG
INGAGKSSTLAILSGELPATTGSAHLSGFDVSKNPEEIHRLVGYCPQFDA
LFETLTGREHLALYATIKGIFVNKRDAAVEEKIEEMGLRQYCDRPAGGYS
GGNKRKLSVAIAIIGDPQIRRE
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mRNA from alignment at S-dermatodea_contig11300:1196..2451+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11300.840.1 ID=mRNA_S-dermatodea_contig11300.840.1|Name=mRNA_S-dermatodea_contig11300.840.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1256bp|location=Sequence derived from alignment at S-dermatodea_contig11300:1196..2451+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GAGATAGACGAGGATGTCAAGACCGAGATGGACCGGGTAATGCACGGTGG TGCAGACAGAGACGCGGTGAAGGTGAGGCCACTTTTAATAGAGGCATAGT GCCGTTGATTGAGGCTGTCAGGACCGGGCTATGCTATTAGCGAGAAAAAG CGATATGGGTTGTGGCTTAACCAGGACCAAGATCAAGCAATAGTTATGGC TGGTGGTACGGACAACATCTATTAATTTCCGTTTCTGCTCCGAATTTCTG AAGAACTACCTTCACGCCTGAGTCTTCGATCATCCCAACGGTCCTCCCAC ATATTTTCATCCAGATCGAAGGTCTCCGCAAGGTATACCCGGTCAGCAGC GGGGCAAAAGTTGCCGTGACAAATACATCCCTCGGCATCCCTCGTGGAGA GTGCTTCGGATTACTGGGCATCAACGGCGCGGGAAAGAGCTCCACCTTGG CCATTCTCTCCGGTTAGTCTACGTCATAGTTTTGCGCTCAAGTAGTCGAA GCGTAGAATGCGCTTGGTTGGGGGTGGGGTAGAGGGTACGCCAAAGCTCA CACAACCCCCTGTGATGGGTGCCTTCTTTAAGCCAGGTTTATGAGCGACG GAACTGGAATTTTTCGCTGTGTGACAAGTACACCTTGCTTGTGCCCCAAT GGCCATGTTGCTTTGCTCCTTCCCCTTTGATTCCCGACGAAATATTTTAC AGCATAACATTTACAGGAGAGTTACCGGCTACAACCGGATCCGCCCACCT TAGCGGCTTCGACGTCAGCAAGAACCCCGAGGAGATCCACCGCCTGGTCG GCTACTGTCCCCAGTTTGACGCCCTCTTCGAGACGCTTACCGGCAGGGAG CATCTCGCGCTCTATGCGACCATAAAGGTGCAGTAAGCATCGAAGGGTTA CCCGATATTGCGACGGTAGCCAATAATTCGGCTGCCAGAGGGTGAAGCGG GAGGACGTGGGGCGGTACGATACGCTGTACCTCTCTCGTCCTTTCCACAC GAGGATCTTTAACGTAAAGCATACGGCGTACCCTTATTTTCCTCAGTTGC TCTACCTCCGCCCCCCCGGTCTTATCCTACATTTTGGAATTCAGGGCATC TTCGTGAACAAGCGTGACGCCGCCGTCGAAGAGAAAATCGAGGAAATGGG CTTGCGGCAGTACTGCGACAGGCCGGCCGGCGGTTACAGCGGGGGAAACA AGCGGAAGCTATCCGTCGCCATCGCCATCATTGGGGACCCTCAGATACGG CGAGAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig11300:1196..2451+

>mRNA_S-dermatodea_contig11300.840.1 ID=mRNA_S-dermatodea_contig11300.840.1|Name=mRNA_S-dermatodea_contig11300.840.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1032bp|location=Sequence derived from alignment at S-dermatodea_contig11300:1196..2451+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGACCGGGTAATGCACGGTGGTGCAGACAGAGACGCGGTGAAGATGGA
CCGGGTAATGCACGGTGGTGCAGACAGAGACGCGGTGAAGATCGAAGGTC
TCCGCAAGGTATACCCGGTCAGCAGCGGGGCAAAAGTTGCCGTGACAAAT
ACATCCCTCGGCATCCCTCGTGGAGAGTGCTTCGGATTACTGGGCATCAA
CGGCGCGGGAAAGAGCTCCACCTTGGCCATTCTCTCCGATCGAAGGTCTC
CGCAAGGTATACCCGGTCAGCAGCGGGGCAAAAGTTGCCGTGACAAATAC
ATCCCTCGGCATCCCTCGTGGAGAGTGCTTCGGATTACTGGGCATCAACG
GCGCGGGAAAGAGCTCCACCTTGGCCATTCTCTCCGGAGAGTTACCGGCT
ACAACCGGATCCGCCCACCTTAGCGGCTTCGACGTCAGCAAGAACCCCGA
GGAGATCCACCGCCTGGTCGGCTACTGTCCCCAGTTTGACGCCCTCTTCG
AGACGCTTACCGGCAGGGAGCATCTCGCGCTCTATGCGACCATAAAGGAG
AGTTACCGGCTACAACCGGATCCGCCCACCTTAGCGGCTTCGACGTCAGC
AAGAACCCCGAGGAGATCCACCGCCTGGTCGGCTACTGTCCCCAGTTTGA
CGCCCTCTTCGAGACGCTTACCGGCAGGGAGCATCTCGCGCTCTATGCGA
CCATAAAGGGCATCTTCGTGAACAAGCGTGACGCCGCCGTCGAAGAGAAA
ATCGAGGAAATGGGCTTGCGGCAGTACTGCGACAGGCCGGCCGGCGGTTA
CAGCGGGGGAAACAAGCGGAAGCTATCCGTCGCCATCGCCATCATTGGGG
ACCCTCAGATACGGCGAGAGGGCATCTTCGTGAACAAGCGTGACGCCGCC
GTCGAAGAGAAAATCGAGGAAATGGGCTTGCGGCAGTACTGCGACAGGCC
GGCCGGCGGTTACAGCGGGGGAAACAAGCGGAAGCTATCCGTCGCCATCG
CCATCATTGGGGACCCTCAGATACGGCGAGAG
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