prot_S-dermatodea_contig11290.826.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11290.826.1
Unique Nameprot_S-dermatodea_contig11290.826.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length70
Homology
BLAST of mRNA_S-dermatodea_contig11290.826.1 vs. uniprot
Match: D7FQB6_ECTSI (Ribosomal_S17_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB6_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 5.300e-40
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKLAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRR 69
            MRFVKNVGLGFKTPK AREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLH+VSKYRR
Sbjct:   62 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRR 130          
BLAST of mRNA_S-dermatodea_contig11290.826.1 vs. uniprot
Match: A0A835Z9X9_9STRA (Ribosomal protein S17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X9_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.230e-35
Identity = 60/69 (86.96%), Postives = 64/69 (92.75%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKLAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRR 69
            MRF KN+GLGFKTPKLA  GTYVDKKCPFTG+VSIRGRILKGLV+SAGKM NT VIRRDYLHYV+KYRR
Sbjct:   35 MRFYKNIGLGFKTPKLAISGTYVDKKCPFTGNVSIRGRILKGLVLSAGKMKNTCVIRRDYLHYVTKYRR 103          
BLAST of mRNA_S-dermatodea_contig11290.826.1 vs. uniprot
Match: A0A7S2XWS0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWS0_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.180e-34
Identity = 59/69 (85.51%), Postives = 64/69 (92.75%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKLAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRR 69
            MRF KN+GLGFKTPKLA EGTYVDKKCPFTG+VSIRGRILKGLVIS  KM NTI++RRDYLHY+SKYRR
Sbjct:   37 MRFYKNIGLGFKTPKLAIEGTYVDKKCPFTGNVSIRGRILKGLVIST-KMKNTIIVRRDYLHYISKYRR 104          
BLAST of mRNA_S-dermatodea_contig11290.826.1 vs. uniprot
Match: A0A7S4UCS4_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UCS4_GUITH)

HSP 1 Score: 115 bits (289), Expect = 5.830e-32
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKLAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRR 69
            MRFVKNVGLG KTP  A E  YVDKKCPFTG+VSIRGRILKG VISAGKM  TI++RRDYLHY+ KYRR
Sbjct:   33 MRFVKNVGLGIKTPDAAIENPYVDKKCPFTGNVSIRGRILKGQVISAGKMKRTIIVRRDYLHYIRKYRR 101          
BLAST of mRNA_S-dermatodea_contig11290.826.1 vs. uniprot
Match: A0A7S4WCA2_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WCA2_9DINO)

HSP 1 Score: 115 bits (288), Expect = 3.180e-31
Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKLAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRR 69
            MR+ KNVGLG KTPK A EGTYVDKKCPFTGDV+IRGRILKGLVIS  KMT TI++RRDYLHY+ KYRR
Sbjct:   37 MRWTKNVGLGIKTPKNAVEGTYVDKKCPFTGDVAIRGRILKGLVIST-KMTRTIIVRRDYLHYIRKYRR 104          
BLAST of mRNA_S-dermatodea_contig11290.826.1 vs. uniprot
Match: A0A6S8U5Q0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8U5Q0_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.160e-30
Identity = 53/68 (77.94%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKLAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYR 68
            +R+V+NVGLGFKTPKLA EG+YVDKKCPFTG+VSIRGRILKG+VIS  KMT T+VIRRDYL++  KYR
Sbjct:   37 LRYVRNVGLGFKTPKLALEGSYVDKKCPFTGNVSIRGRILKGMVIST-KMTRTVVIRRDYLNWCGKYR 103          
BLAST of mRNA_S-dermatodea_contig11290.826.1 vs. uniprot
Match: A0A7S3PX81_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX81_9STRA)

HSP 1 Score: 112 bits (279), Expect = 7.570e-30
Identity = 54/69 (78.26%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKLAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRR 69
            MRF ++VGLG KTP  A EGTYVDKKCPFTG+V+IRGRILKGLVIS  KM NT+VIRRDYLHY++KYRR
Sbjct:   40 MRFTRSVGLGIKTPDAAIEGTYVDKKCPFTGNVAIRGRILKGLVIS-NKMKNTVVIRRDYLHYITKYRR 107          
BLAST of mRNA_S-dermatodea_contig11290.826.1 vs. uniprot
Match: A0A812UUF3_SYMMI (RPS11 protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UUF3_SYMMI)

HSP 1 Score: 110 bits (276), Expect = 7.630e-30
Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKLAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRR 69
            MRF K+VGLGFKTPK A EG+YVDKKCPFTG+VSIRGRILKG+V+S  KM  T+VIRRDYL YV KYRR
Sbjct:    1 MRFYKSVGLGFKTPKAASEGSYVDKKCPFTGNVSIRGRILKGIVVST-KMKRTVVIRRDYLQYVRKYRR 68          
BLAST of mRNA_S-dermatodea_contig11290.826.1 vs. uniprot
Match: A0A6V2F9D2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2F9D2_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.160e-29
Identity = 53/69 (76.81%), Postives = 60/69 (86.96%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKLAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRR 69
            MRF +NVGLG +TP  A EG YVDKKCPFTG+VSIRGRILKGLVIS  KM NTI++RRDYLHY++KYRR
Sbjct:   43 MRFTRNVGLGIRTPATAIEGNYVDKKCPFTGNVSIRGRILKGLVIST-KMKNTIIVRRDYLHYITKYRR 110          
BLAST of mRNA_S-dermatodea_contig11290.826.1 vs. uniprot
Match: Q9U9A0_PHYPO (Putative ribosomal protein S11 (Fragment) n=1 Tax=Physarum polycephalum TaxID=5791 RepID=Q9U9A0_PHYPO)

HSP 1 Score: 110 bits (276), Expect = 1.730e-29
Identity = 48/68 (70.59%), Postives = 61/68 (89.71%), Query Frame = 0
Query:    2 RFVKNVGLGFKTPKLAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYVSKYRR 69
            R+V+ VGLG+KTPK A EGT+VD KCPFTG+VSIRGRIL+G+V+SAGKM  T+V+RR+YLHY+ KY+R
Sbjct:   35 RYVRQVGLGYKTPKAALEGTFVDDKCPFTGNVSIRGRILRGVVVSAGKMKRTVVVRRNYLHYIQKYKR 102          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11290.826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB6_ECTSI5.300e-4097.10Ribosomal_S17_N domain-containing protein n=1 Tax=... [more]
A0A835Z9X9_9STRA1.230e-3586.96Ribosomal protein S17-domain-containing protein n=... [more]
A0A7S2XWS0_9STRA4.180e-3485.51Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4UCS4_GUITH5.830e-3279.71Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S4WCA2_9DINO3.180e-3181.16Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A6S8U5Q0_9STRA4.160e-3077.94Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3PX81_9STRA7.570e-3078.26Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A812UUF3_SYMMI7.630e-3078.26RPS11 protein n=2 Tax=Symbiodinium microadriaticum... [more]
A0A6V2F9D2_9STRA1.160e-2976.81Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
Q9U9A0_PHYPO1.730e-2970.59Putative ribosomal protein S11 (Fragment) n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.1000coord: 1..69
e-value: 4.6E-31
score: 109.5
NoneNo IPR availablePANTHERPTHR10744:SF940S RIBOSOMAL PROTEIN S11coord: 2..69
NoneNo IPR availablePRODOMPD001295coord: 38..69
e-value: 1.0E-5
score: 110.0
IPR03244040S ribosomal protein S11, N-terminalPFAMPF16205Ribosomal_S17_Ncoord: 1..40
e-value: 2.2E-23
score: 82.4
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 2..69
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 36..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11290contigS-dermatodea_contig11290:318..1228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11290.826.1mRNA_S-dermatodea_contig11290.826.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11290 318..1234 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11290.826.1 ID=prot_S-dermatodea_contig11290.826.1|Name=mRNA_S-dermatodea_contig11290.826.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=70bp
MRFVKNVGLGFKTPKLAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKM
TNTIVIRRDYLHYVSKYRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032440Ribosomal_S11_N
IPR000266Ribosomal_S17/S11
IPR012340NA-bd_OB-fold