prot_S-dermatodea_contig11236.795.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11236.795.1
Unique Nameprot_S-dermatodea_contig11236.795.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length548
Homology
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BLAST of mRNA_S-dermatodea_contig11236.795.1 vs. uniprot
Match: A0A6H5L576_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L576_9PHAE)

HSP 1 Score: 509 bits (1310), Expect = 2.160e-171
Identity = 339/608 (55.76%), Postives = 397/608 (65.30%), Query Frame = 0 
Query:    1 QELLGGPGVEEKLLADPTTNVAMLSSLGGAYLMLWKARRE--KPSGGGTPHGGR-TDARESLDFIIDVSAPRMELLRQSQRFLGEALTAPENFNDPVIRAQLG-------------------------------------------FCKEARGDCKEALALYASIISDSPLSRGTSTVIFRTSVLLAHIGRVNECVRYLEFIEEEPPKECSKLLVQALLYTCHVAMSLQKKASRRLLPLREAFNDEYIGGRIGAGFSRQEIPWDRLPGWFPMWRELGEQSLRKGDYYLGVQMLAQATLHKEDAETLVSTAEMLWVLRDAKGALKQCERAYAADPEHVRGKQRLSAWAPEKWRHRIVKEEERRKAVHEIRRLAELSVRKADAMAARRARREKARVLRAWRRVHAKCKARMVETDGGEKSVVADTSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------LSSEGSPAAHAVGSSDALSPPPPRHSFPLPSAAAAARAGRANFSACFRAELLRADRARRDRA---GGGEAKMASVEVAGTMTREVM------LGENRDRR-FYTPEMRALARFSWHRKTYEARNTPAVY 543
            +ELL GPGVE++LLADP T VAMLSSLGGAYLMLW+AR E    S G    GG+  D RE ++  +DVS+ R +LL ++Q FL EAL +PEN NDP IRAQ+G                                           FCKEARGD KEAL LYASIISDS LS G S VIFRTSVLLA++GR++ECVRYLEFIE +PPK CS LLVQALLYTC+V++ L+ K SRRL+ LREA+NDEY  GR+G GFSR EIPWDRLPGWF MWRELG +S+R G+YY G+QM +QATL ++D ET+V TAEMLWVL + K AL  CERAYAADP H+  ++RLS WAP+KW+ RIVKEEERR+A+ E+RRLA+LS +KADAM ARR RREKAR LRAWRR+H K K R   +  GE++       XXXXXXXXX                   XXXXXXXXXXXXXXXXX         LS++          S A S P P   FP+PSAA AA AGR+NFSACFRAE  RA R +R+     G     MASV+VA     E M       G N  R  F T EMRALARF  HRKT+EA+ T  VY
Sbjct:   47 EELLRGPGVEDRLLADPNTRVAMLSSLGGAYLMLWRARGETTSESTGSRAGGGQGKDTREVVEIRLDVSSERTDLLHRAQHFLEEALMSPENLNDPAIRAQVGERGKWKSVLRLPGLARLPPSRLSLFRPDIRSLLHPDCCAFKKAFCKEARGDYKEALTLYASIISDSALSPGASAVIFRTSVLLAYVGRLDECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEVKVSRRLITLREAYNDEYTAGRMGRGFSRDEIPWDRLPGWFYMWRELGVESIRAGNYYAGIQMFSQATLQRQDPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWAPQKWKERIVKEEERREAITEMRRLADLSDKKADAMLARRRRREKARFLRAWRRLHDKHKHRRSTSTEGEEAQTGXXXXXXXXXXXXXGSDKFSWSDSSSSRSGSSSXXXXXXXXXXXXXXXXXXXXXXFASSLSAKEQVERSVDEKSSASSAPVPEP-FPVPSAAEAAEAGRSNFSACFRAETERAMRRKREATEHHGEMPMDMASVKVAAEAIHEAMRGGGWKTGTNGARSGFATHEMRALARFQCHRKTHEAKITKVVY 653
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11236.795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L576_9PHAE2.160e-17155.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 72..361
e-value: 3.8E-9
score: 38.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 86..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11236contigS-dermatodea_contig11236:2668..7591 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11236.795.1mRNA_S-dermatodea_contig11236.795.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11236 2668..7591 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11236.795.1 ID=prot_S-dermatodea_contig11236.795.1|Name=mRNA_S-dermatodea_contig11236.795.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=548bp
QELLGGPGVEEKLLADPTTNVAMLSSLGGAYLMLWKARREKPSGGGTPHG
GRTDARESLDFIIDVSAPRMELLRQSQRFLGEALTAPENFNDPVIRAQLG
FCKEARGDCKEALALYASIISDSPLSRGTSTVIFRTSVLLAHIGRVNECV
RYLEFIEEEPPKECSKLLVQALLYTCHVAMSLQKKASRRLLPLREAFNDE
YIGGRIGAGFSRQEIPWDRLPGWFPMWRELGEQSLRKGDYYLGVQMLAQA
TLHKEDAETLVSTAEMLWVLRDAKGALKQCERAYAADPEHVRGKQRLSAW
APEKWRHRIVKEEERRKAVHEIRRLAELSVRKADAMAARRARREKARVLR
AWRRVHAKCKARMVETDGGEKSVVADTSIGSSSYQSKASLGLSSPSGSSP
SDSSTSSSGSKDDSSSSSSLSISTLSSEGSPAAHAVGSSDALSPPPPRHS
FPLPSAAAAARAGRANFSACFRAELLRADRARRDRAGGGEAKMASVEVAG
TMTREVMLGENRDRRFYTPEMRALARFSWHRKTYEARNTPAVYKYGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf