mRNA_S-dermatodea_contig11236.795.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11236.795.1 vs. uniprot
Match: A0A6H5L576_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L576_9PHAE) HSP 1 Score: 509 bits (1310), Expect = 2.160e-171 Identity = 339/608 (55.76%), Postives = 397/608 (65.30%), Query Frame = 1
Query: 1 QELLGGPGVEEKLLADPTTNVAMLSSLGGAYLMLWKARRE--KPSGGGTPHGGR-TDARESLDFIIDVSAPRMELLRQSQRFLGEALTAPENFNDPVIRAQLG-------------------------------------------FCKEARGDCKEALALYASIISDSPLSRGTSTVIFRTSVLLAHIGRVNECVRYLEFIEEEPPKECSKLLVQALLYTCHVAMSLQKKASRRLLPLREAFNDEYIGGRIGAGFSRQEIPWDRLPGWFPMWRELGEQSLRKGDYYLGVQMLAQATLHKEDAETLVSTAEMLWVLRDAKGALKQCERAYAADPEHVRGKQRLSAWAPEKWRHRIVKEEERRKAVHEIRRLAELSVRKADAMAARRARREKARVLRAWRRVHAKCKARMVETDGGEKSVVADTSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------LSSEGSPAAHAVGSSDALSPPPPRHSFPLPSAAAAARAGRANFSACFRAELLRADRARRDRA---GGGEAKMASVEVAGTMTREVM------LGENRDRR-FYTPEMRALARFSWHRKTYEARNTPAVY 1629
+ELL GPGVE++LLADP T VAMLSSLGGAYLMLW+AR E S G GG+ D RE ++ +DVS+ R +LL ++Q FL EAL +PEN NDP IRAQ+G FCKEARGD KEAL LYASIISDS LS G S VIFRTSVLLA++GR++ECVRYLEFIE +PPK CS LLVQALLYTC+V++ L+ K SRRL+ LREA+NDEY GR+G GFSR EIPWDRLPGWF MWRELG +S+R G+YY G+QM +QATL ++D ET+V TAEMLWVL + K AL CERAYAADP H+ ++RLS WAP+KW+ RIVKEEERR+A+ E+RRLA+LS +KADAM ARR RREKAR LRAWRR+H K K R + GE++ XXXXXXXXX XXXXXXXXXXXXXXXXX LS++ S A S P P FP+PSAA AA AGR+NFSACFRAE RA R +R+ G MASV+VA E M G N R F T EMRALARF HRKT+EA+ T VY
Sbjct: 47 EELLRGPGVEDRLLADPNTRVAMLSSLGGAYLMLWRARGETTSESTGSRAGGGQGKDTREVVEIRLDVSSERTDLLHRAQHFLEEALMSPENLNDPAIRAQVGERGKWKSVLRLPGLARLPPSRLSLFRPDIRSLLHPDCCAFKKAFCKEARGDYKEALTLYASIISDSALSPGASAVIFRTSVLLAYVGRLDECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEVKVSRRLITLREAYNDEYTAGRMGRGFSRDEIPWDRLPGWFYMWRELGVESIRAGNYYAGIQMFSQATLQRQDPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWAPQKWKERIVKEEERREAITEMRRLADLSDKKADAMLARRRRREKARFLRAWRRLHDKHKHRRSTSTEGEEAQTGXXXXXXXXXXXXXGSDKFSWSDSSSSRSGSSSXXXXXXXXXXXXXXXXXXXXXXFASSLSAKEQVERSVDEKSSASSAPVPEP-FPVPSAAEAAEAGRSNFSACFRAETERAMRRKREATEHHGEMPMDMASVKVAAEAIHEAMRGGGWKTGTNGARSGFATHEMRALARFQCHRKTHEAKITKVVY 653 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11236.795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11236.795.1 >prot_S-dermatodea_contig11236.795.1 ID=prot_S-dermatodea_contig11236.795.1|Name=mRNA_S-dermatodea_contig11236.795.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=548bp QELLGGPGVEEKLLADPTTNVAMLSSLGGAYLMLWKARREKPSGGGTPHGback to top mRNA from alignment at S-dermatodea_contig11236:2668..7591- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11236.795.1 ID=mRNA_S-dermatodea_contig11236.795.1|Name=mRNA_S-dermatodea_contig11236.795.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4924bp|location=Sequence derived from alignment at S-dermatodea_contig11236:2668..7591- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11236:2668..7591- >mRNA_S-dermatodea_contig11236.795.1 ID=mRNA_S-dermatodea_contig11236.795.1|Name=mRNA_S-dermatodea_contig11236.795.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3288bp|location=Sequence derived from alignment at S-dermatodea_contig11236:2668..7591- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |