prot_S-dermatodea_contig1122.783.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1122.783.1
Unique Nameprot_S-dermatodea_contig1122.783.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length747
Homology
BLAST of mRNA_S-dermatodea_contig1122.783.1 vs. uniprot
Match: D7FSK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK6_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 2.500e-87
Identity = 178/391 (45.52%), Postives = 231/391 (59.08%), Query Frame = 0
Query:  331 GTVVIARLGSHASGVFVTITDIGRRVLIEARDFENGPLLAFSRASLEVWTAATGIPALKPPRDMEAFRKRLEDHLAQLLGAGFRSRTSQLVKKRATRDSQPSPSR-RWRGTLLHVSDIEMGD-EQIDDDYIGNAGS-LDDETQACSRSSGVTPLDPA-VGQQKALRLEMLTRMIDEYHAKHGRG----------DDRKGNPATIQKRSREPSAGQAVAFADQG------GARIEASADSDKGLTLPAIADPPGSESTPSLVERSASPALPARYLCKCCGGEGGKGHGRRCRHTFRRCGLCRVEEVRRVLYGTERGRGRGDSDAKRKGHKPALPASVGVRREGDGEQEEEYDWVTDTDEENPEYECDVCGRVIQETADRFHCETCGDYDMCQ 701
            GTV IARLGSHA GVFV +TD GRR+LIEARDFE GPLLA S  SLE WTA TGI  L PP D  AF+K LE+ LA LLGAGFRSRTS+L +KRA R++Q      RWRGTLL +S++E G   Q+++D  G+  +  + +         ++P D   + Q++ALRLEMLTRM+D++HAKHGR            +++G  A     +R+P+   A    D+       G R+                     E    +V           ++      +GG+GHGR+C HTFRRCG CRVEEVRRVL     GR R           P+LP       + D  +EE+++WVTD+DEE+PE+ECD CGRVI++T+DRFHCETCGDYD+ Q
Sbjct:    2 GTVPIARLGSHAEGVFVVVTDGGRRLLIEARDFERGPLLAKSTVSLEDWTATTGIATLSPPTDNRAFKKILEEQLAALLGAGFRSRTSRLERKRAAREAQQQGGGVRWRGTLLELSEMEKGRLGQLEEDDNGSENNDANPDRPPPKLPLLLSPRDSTPLEQKRALRLEMLTRMVDDFHAKHGRSRRXXXXXXXXXEKRGVGAPAPGDARDPTTVVATGCDDESAVGGHDGERVR--------------------EGPVHIVSNEGQDGENDPHITTANQAKGGRGHGRKCEHTFRRCGFCRVEEVRRVLGIRAPGRTREPVQESMVVRVPSLPQLKFGDDQDDDNEEEDFEWVTDSDEEDPEFECDSCGRVIEDTSDRFHCETCGDYDLMQ 372          
BLAST of mRNA_S-dermatodea_contig1122.783.1 vs. uniprot
Match: A0A6H5KMB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMB6_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 6.810e-63
Identity = 157/359 (43.73%), Postives = 194/359 (54.04%), Query Frame = 0
Query:   91 VVKAIGGDLTLSLLRPSR-----GERPHCDGVGHKRNEGAEESG---KCGAKRAKSLRQSLSLQATWRDWERLGYGPLQWMSHTQKEHLGSLALSWVTFKT-----KQHQSRAGEESP----------EAFLQLRPTIARISRDCDMTT-AVGFS------------------------------------GHNKKSRRARVEIRDEGCVFRVNVEVDAEVSSQGRR------LVQVFGQEAWRETGLGELLWMERSWRQYLAGRLSQQVAIRTAVDCGSEISGQDVDNEDQI---LIIRSDMPVRYWSGTVVIARLGSHASGVFVTITDIGRRVLIEARDFENGPLLAFSRASLEVWT 380
            +VKA GG+LTLSL +PSR     G      GV  +    A  SG     G     ++R+SL+L A W DW   GYGPLQWMSH QK  +  L+L WV+F+T     ++  +    E+P          EAFL   P ++ ++RD   ++ A G S                                    G  + SR +RV +RDEG V RV V V+AE  + GR       L Q FG+E+WRETGLGELLW++ S RQYLA RL+QQVAI    D        D DN  +I   L+I SD+P+ YW GTV IARLGSHA GVFV ITD GRR+LIEARDFE GPLLA S  SLE WT
Sbjct:    1 MVKATGGELTLSLFQPSRAAPSTGGTTRPAGVRGRGAAAANGSGVHSTAGDPGRAAMRRSLTLVAAWADWAEAGYGPLQWMSHEQKVFIARLSLYWVSFRTPARGFEEKNAPNANETPVRHRRRRTTKEAFLHFHPILSSVTRDVGKSSGAPGSSVRGTGXXXXXXXXXXXXXXXXXTSSRTAPRGGSEIFGGEETSRTSRVLVRDEGGVLRVEV-VEAERKNVGRSKSGVSMLDQAFGKESWRETGLGELLWLDCSCRQYLALRLAQQVAIVVDDDRDGRGGQHDQDNVLKIKPRLVIISDLPLPYWMGTVPIARLGSHAEGVFVMITDAGRRLLIEARDFEGGPLLAKSTVSLEDWT 358          
BLAST of mRNA_S-dermatodea_contig1122.783.1 vs. uniprot
Match: D7FSK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK7_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 9.310e-27
Identity = 82/205 (40.00%), Postives = 110/205 (53.66%), Query Frame = 0
Query:  139 LRQSLSLQATWRDWERLGYGPLQWMSHTQKEHLGSLALSWVTFKTKQHQSRA--GEESP----------EAFLQLRPTIARISR-----DCDMTTAVGFSGHN-------------------------KKSRRARVEIRDEGCVFRVNVEVDAEVSSQGRR------LVQVFGQEAWRETGLGELLWMERSWRQYLAGRLSQQVA 295
            +R+SLSL A W DW   GYGPLQWMSH QK  +  L+L WV+F+    +  A    E+P          EAFL  RP ++ ++R     + D  +AV  +G +                         + SR +RV +RDEG V RV V V+AE  + GR       L + FG+EAWRETGL ELLW++ S RQYLA RL+QQ++
Sbjct:    1 MRRSLSLVAAWADWAEAGYGPLQWMSHEQKVFIARLSLYWVSFRRGFEEKNAPTANETPVQHHRRRTTKEAFLHFRPILSSVTRVVGKSNGDPGSAVPGTGGSGALVVVGGASSRTVPREGSEIFGGGETSRTSRVFVRDEGGVLRVEV-VEAERKNGGRPKSGVSILDEAFGKEAWRETGLEELLWLDCSCRQYLALRLAQQLS 204          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1122.783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FSK6_ECTSI2.500e-8745.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMB6_9PHAE6.810e-6343.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSK7_ECTSI9.310e-2740.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 669..715
e-value: 6.3E-4
score: 29.1
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 672..713
e-value: 2.0E-8
score: 33.9
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 669..717
score: 10.7
NoneNo IPR availableGENE3D3.30.60.90coord: 668..720
e-value: 2.1E-9
score: 39.1
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 671..717

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1122contigS-dermatodea_contig1122:4209..8638 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1122.783.1mRNA_S-dermatodea_contig1122.783.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1122 4209..8638 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1122.783.1 ID=prot_S-dermatodea_contig1122.783.1|Name=mRNA_S-dermatodea_contig1122.783.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=747bp
AHSVFDGIPTSTLTPTKLHTPPRKRSAIQRREDGQNETLCSSGALPGLCS
CRVVLRVGTTLPFVETGVVNDTGSNEGAGLSSTLDGRWLVVVKAIGGDLT
LSLLRPSRGERPHCDGVGHKRNEGAEESGKCGAKRAKSLRQSLSLQATWR
DWERLGYGPLQWMSHTQKEHLGSLALSWVTFKTKQHQSRAGEESPEAFLQ
LRPTIARISRDCDMTTAVGFSGHNKKSRRARVEIRDEGCVFRVNVEVDAE
VSSQGRRLVQVFGQEAWRETGLGELLWMERSWRQYLAGRLSQQVAIRTAV
DCGSEISGQDVDNEDQILIIRSDMPVRYWSGTVVIARLGSHASGVFVTIT
DIGRRVLIEARDFENGPLLAFSRASLEVWTAATGIPALKPPRDMEAFRKR
LEDHLAQLLGAGFRSRTSQLVKKRATRDSQPSPSRRWRGTLLHVSDIEMG
DEQIDDDYIGNAGSLDDETQACSRSSGVTPLDPAVGQQKALRLEMLTRMI
DEYHAKHGRGDDRKGNPATIQKRSREPSAGQAVAFADQGGARIEASADSD
KGLTLPAIADPPGSESTPSLVERSASPALPARYLCKCCGGEGGKGHGRRC
RHTFRRCGLCRVEEVRRVLYGTERGRGRGDSDAKRKGHKPALPASVGVRR
EGDGEQEEEYDWVTDTDEENPEYECDVCGRVIQETADRFHCETCGDYDMC
QACFLSHKALAGHENGHEAGTGVGHVASHDVKRIMGNAAPVPGWSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000433Znf_ZZ