prot_S-dermatodea_contig11215.781.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11215.781.1
Unique Nameprot_S-dermatodea_contig11215.781.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length143
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig11215.781.1 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 2.250e-20
Identity = 53/75 (70.67%), Postives = 59/75 (78.67%), Query Frame = 0 
Query:   16 SPVRHQAQVTFAEVGPIVLDPDVGSEVDTLLVED-VSVFKGLVRRDTPGGTVRVRVEVGREQIRVLVEPDPPADA 89
            SP R Q QV+FAEVGPIVLD  VG+EVD LL  D  +VF+GLVRRDTPG TVRVRVEVGREQIRV+ +P   A A
Sbjct:  544 SPQRQQDQVSFAEVGPIVLDSAVGAEVDKLLSADGPAVFRGLVRRDTPGETVRVRVEVGREQIRVVAQPGDAAAA 618
[Close]
BLAST of mRNA_S-dermatodea_contig11215.781.1 vs. uniprot
Match: D7FUZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ4_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 3.350e-20
Identity = 55/78 (70.51%), Postives = 61/78 (78.21%), Query Frame = 0 
Query:   16 SPVRHQAQVTFAEVGPIVLDPDVGSEVDTLLVED-VSVFKGLVRRDTPGGTVRVRVEVGREQIRVLVEP-DPPADANG 91
            SP R Q QV+FAE GPIVLD  VG+EVD LL  D  +VF+GLVRRDTPG TVRVRVEVGREQIRV+ EP D  A A+G
Sbjct:   90 SPQRQQDQVSFAEGGPIVLDSPVGAEVDKLLSADGPAVFRGLVRRDTPGETVRVRVEVGREQIRVVAEPGDAAAAADG 167
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11215.781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZQ7_9PHAE2.250e-2070.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUZ4_ECTSI3.350e-2070.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11215contigS-dermatodea_contig11215:2496..6200 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11215.781.1mRNA_S-dermatodea_contig11215.781.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11215 2496..6200 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11215.781.1 ID=prot_S-dermatodea_contig11215.781.1|Name=mRNA_S-dermatodea_contig11215.781.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=143bp
RIRVLGGGVRVEVPSSPVRHQAQVTFAEVGPIVLDPDVGSEVDTLLVEDV
SVFKGLVRRDTPGGTVRVRVEVGREQIRVLVEPDPPADANGTWGASTTGT
ASEKDGEAATDAADTGEGVVDASDGGADEEGSGNGGCPPGGGG
back to top