prot_S-dermatodea_contig11185.762.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11185.762.1
Unique Nameprot_S-dermatodea_contig11185.762.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length118
Homology
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BLAST of mRNA_S-dermatodea_contig11185.762.1 vs. uniprot
Match: D8LD54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD54_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 2.050e-5
Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:   47 AVSTRPKRHAEKRFYDDIEDERPQHLSTRGQRKKKDLAP 85
            AVS+RPKR+AEK+ YDD ED+RPQHLS +  +KKK + P
Sbjct:   57 AVSSRPKRNAEKKKYDDSEDDRPQHLSAKRSKKKKGIIP 95
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11185.762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD54_ECTSI2.050e-564.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11185contigS-dermatodea_contig11185:1601..6081 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11185.762.1mRNA_S-dermatodea_contig11185.762.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11185 1601..6082 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11185.762.1 ID=prot_S-dermatodea_contig11185.762.1|Name=mRNA_S-dermatodea_contig11185.762.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=118bp
NTRHRSPTVSEGRDMAPAKKKATKTTPKAERAANAGSTKHQQVAPQAVST
RPKRHAEKRFYDDIEDERPQHLSTRGQRKKKDLAPAPTLSSDEEFVSPMS
NGSGRKVGNMSSGSASGG
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