prot_S-dermatodea_contig11165.755.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig11165.755.1
Unique Name	prot_S-dermatodea_contig11165.755.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	157

Homology

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BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A2I6RJN1_SACJA (GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A2I6RJN1_SACJA)

HSP 1 Score: 331 bits (848), Expect = 1.610e-112
Identity = 154/156 (98.72%), Postives = 155/156 (99.36%), Query Frame = 0

Query:    1 QVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM 156
            +VGGLFSNLKYKVEFFRENILINDNVMECCRIYKV KLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM
Sbjct:   78 RVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM 233

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BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A6H5JCJ7_9PHAE (GFS protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ7_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 5.670e-111
Identity = 152/157 (96.82%), Postives = 153/157 (97.45%), Query Frame = 0

Query:    2 VGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYK--EEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM 156
            VGGLFSNLKYKVEFFRENILINDNVMECCRIYKV KLVSCLSTCIFPDKTTYPIDETMVHNGPPH SNEGYAYAKRMIDVLNRCYK  +EYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM
Sbjct:   10 VGGLFSNLKYKVEFFRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKVPDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM 166

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BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A836C923_9STRA (GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C923_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.010e-96
Identity = 131/156 (83.97%), Postives = 145/156 (92.95%), Query Frame = 0

Query:    1 QVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM 156
            +VGGLF+NLKYKVEF+REN+LINDNVMECCRIYKV KLVSCLSTC+FPDKTTYPIDETMVH GPPH SNEGYAYAKRMIDV+NRCY++EYGCNFTSVIPTNIYGK DNFSID GHV+PGLIHKC+ A++ G    +WG+GSPLRQFIYNVDLGALM
Sbjct:   63 KVGGLFNNLKYKVEFYRENMLINDNVMECCRIYKVQKLVSCLSTCVFPDKTTYPIDETMVHAGPPHSSNEGYAYAKRMIDVMNRCYRDEYGCNFTSVIPTNIYGKHDNFSIDGGHVIPGLIHKCFLAEKNGTPFTIWGSGSPLRQFIYNVDLGALM 218

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BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A7S3H4T7_9STRA (GDP-L-fucose synthase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4T7_9STRA)

HSP 1 Score: 275 bits (704), Expect = 1.020e-90
Identity = 124/154 (80.52%), Postives = 138/154 (89.61%), Query Frame = 0

Query:    2 VGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGAL 155
            VGGLF NLKYKVEF+REN+LINDNVMEC R + VVKLVSCLSTCIFPDKTTYPIDETMVH+GPPH SN GYAYAKRMIDV+N+CY EEYGCN+TS+IPTNIYG  DNF I++GHV+PGLIHKCYKAK+ G DL +WGTGSPLRQFIY+ DL  L
Sbjct:   71 VGGLFKNLKYKVEFYRENVLINDNVMECSREFNVVKLVSCLSTCIFPDKTTYPIDETMVHDGPPHSSNAGYAYAKRMIDVVNKCYNEEYGCNYTSIIPTNIYGPHDNFGIEDGHVIPGLIHKCYKAKRDGTDLTIWGTGSPLRQFIYSEDLARL 224

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BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A6T7DWV8_9STRA (GDP-L-fucose synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DWV8_9STRA)

HSP 1 Score: 277 bits (709), Expect = 1.090e-90
Identity = 123/155 (79.35%), Postives = 143/155 (92.26%), Query Frame = 0

Query:    1 QVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGAL 155
            +VGGLF+N K+KVEF+R+NI+INDNVMECCRI+ V KLVSCLSTCIFPDKTTYPIDETMVH+GPPH SNEGYAYAKRMIDVLNRCY +EYGCN TS+IPTNIYG  DNF+I+NGHV+PGLIHK + AKQ+GEDLH+WG+G+PLRQFI++ DL AL
Sbjct:  130 KVGGLFANQKFKVEFYRDNIIINDNVMECCRIFGVRKLVSCLSTCIFPDKTTYPIDETMVHDGPPHKSNEGYAYAKRMIDVLNRCYSDEYGCNMTSIIPTNIYGPHDNFNIENGHVIPGLIHKAFLAKQSGEDLHIWGSGTPLRQFIFSQDLAAL 284

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BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A7S4EAF3_9STRA (GDP-L-fucose synthase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAF3_9STRA)

HSP 1 Score: 274 bits (700), Expect = 4.010e-90
Identity = 124/154 (80.52%), Postives = 138/154 (89.61%), Query Frame = 0

Query:    2 VGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGAL 155
            VGGLF+N+  KVEF+REN+L+NDNVMECCRIYKV KLVSCLSTCIFPDKTTYPIDETM+H+G PH+SNEGYAYAKRMIDV+NRCYK+EYGCNFTSVIPTNIYG  DN+SI  GHV+PGLIHKCY AK+ G    VWGTGSPLRQFIY+ DL AL
Sbjct:   73 VGGLFANMSKKVEFYRENMLMNDNVMECCRIYKVQKLVSCLSTCIFPDKTTYPIDETMIHDGAPHLSNEGYAYAKRMIDVMNRCYKDEYGCNFTSVIPTNIYGPHDNYSIQGGHVVPGLIHKCYLAKKNGTPFEVWGTGSPLRQFIYSGDLAAL 226

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BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A7S2WX89_9STRA (GDP-L-fucose synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX89_9STRA)

HSP 1 Score: 271 bits (694), Expect = 2.670e-88
Identity = 120/155 (77.42%), Postives = 139/155 (89.68%), Query Frame = 0

Query:    1 QVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGAL 155
            +VGGLF+N+  KVEF+REN+LINDNVMECCRI+KV KLVSCLSTCIFPDKT+YPIDE+MVHNGPPHVSNEGYAYAKR+IDV+NRCY +EYGC  T++IPTNIYG  DNFSI NGHV+P LIHK Y AKQ G D ++WG+G+PLRQFI+N DLGAL
Sbjct:  139 KVGGLFANMNEKVEFYRENVLINDNVMECCRIFKVQKLVSCLSTCIFPDKTSYPIDESMVHNGPPHVSNEGYAYAKRLIDVMNRCYSDEYGCKMTAIIPTNIYGPHDNFSIKNGHVIPSLIHKAYLAKQTGGDFNIWGSGTPLRQFIFNQDLGAL 293

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BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A812VCK5_9DINO (GDP-L-fucose synthase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VCK5_9DINO)

HSP 1 Score: 267 bits (683), Expect = 1.040e-87
Identity = 119/156 (76.28%), Postives = 138/156 (88.46%), Query Frame = 0

Query:    2 VGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMA 157
            VGGLF NLKYKVEF+R N L+NDNVMECC+ +KV KLVSC+STCIFPDKTTYPIDETMVH+GPPH SNEGYAYAKRMIDV+NRCY++EYGCNFT+VIPTN+YG  DNF+I++GHV+PGLIHK YKAK  G +L +WGTG PLRQFI++ DL  L A
Sbjct:   77 VGGLFRNLKYKVEFYRHNTLMNDNVMECCKDHKVKKLVSCVSTCIFPDKTTYPIDETMVHDGPPHRSNEGYAYAKRMIDVMNRCYRDEYGCNFTAVIPTNVYGPHDNFNIEDGHVVPGLIHKAYKAKAEGSELTIWGTGKPLRQFIFSEDLARLTA 232

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BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A813BQ17_9DINO (GDP-L-fucose synthase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BQ17_9DINO)

HSP 1 Score: 266 bits (679), Expect = 4.340e-87
Identity = 119/156 (76.28%), Postives = 135/156 (86.54%), Query Frame = 0

Query:    2 VGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMA 157
            VGGLF NLKYKVEF+R N L+NDN+MEC R +KV KLVSCLSTCIFPDKTTYPIDETMVHNGPPH SNEGYAYAKRMID +NRCY EEYGC FTS+IPTNIYG  DNFSI++GHV+PGLIHKCY A++ G    +WG+G+PLRQFIY++DL  L A
Sbjct:   62 VGGLFRNLKYKVEFYRYNTLMNDNIMECARKFKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNEGYAYAKRMIDTMNRCYNEEYGCKFTSIIPTNIYGPHDNFSIEDGHVIPGLIHKCYNAERDGTPFTIWGSGTPLRQFIYSLDLARLTA 217

[Close]

BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A7S2GAW9_9STRA (GDP-L-fucose synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GAW9_9STRA)

HSP 1 Score: 267 bits (683), Expect = 5.780e-87
Identity = 120/155 (77.42%), Postives = 138/155 (89.03%), Query Frame = 0

Query:    1 QVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGAL 155
            +VGGLF+N+  KVEF+REN+LINDNVMECCR +KV KLVSCLSTC+FPDKTTYPIDETMVH+GPPHVSNEGYAYAKRMIDV+NRCY E+YGCN TS+IPTNIYG  DNFSI+ GHV+PGLIHK Y AK+ G  L +WG+G+PLRQFI+N DLG L
Sbjct:  111 KVGGLFANMSQKVEFYRENMLINDNVMECCRKFKVDKLVSCLSTCVFPDKTTYPIDETMVHSGPPHVSNEGYAYAKRMIDVMNRCYAEQYGCNMTSIIPTNIYGPHDNFSIEGGHVIPGLIHKAYLAKKNGTVLSIWGSGTPLRQFIFNRDLGEL 265

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2I6RJN1_SACJA	1.610e-112	98.72	GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2...	[more]
A0A6H5JCJ7_9PHAE	5.670e-111	96.82	GFS protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A836C923_9STRA	1.010e-96	83.97	GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxI...	[more]
A0A7S3H4T7_9STRA	1.020e-90	80.52	GDP-L-fucose synthase n=2 Tax=Spumella elongata Ta...	[more]
A0A6T7DWV8_9STRA	1.090e-90	79.35	GDP-L-fucose synthase n=1 Tax=Florenciella parvula...	[more]
A0A7S4EAF3_9STRA	4.010e-90	80.52	GDP-L-fucose synthase n=2 Tax=Pelagomonas calceola...	[more]
A0A7S2WX89_9STRA	2.670e-88	77.42	GDP-L-fucose synthase n=1 Tax=Rhizochromulina mari...	[more]
A0A812VCK5_9DINO	1.040e-87	76.28	GDP-L-fucose synthase n=1 Tax=Symbiodinium sp. KB8...	[more]
A0A813BQ17_9DINO	4.340e-87	76.28	GDP-L-fucose synthase n=1 Tax=Symbiodinium sp. KB8...	[more]
A0A7S2GAW9_9STRA	5.780e-87	77.42	GDP-L-fucose synthase n=1 Tax=Dictyocha speculum T...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 2..154 e-value: 6.9E-35 score: 120.6
None	No IPR available	GENE3D	3.40.50.720		coord: 1..148 e-value: 1.0E-32 score: 115.2
None	No IPR available	PANTHER	PTHR43238	FAMILY NOT NAMED	coord: 1..156
None	No IPR available	PANTHER	PTHR43238:SF1	GDP-L-FUCOSE SYNTHASE	coord: 1..156
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 3..155

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig11165	contig	S-dermatodea_contig11165:2322..3602 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig11165.755.1	mRNA_S-dermatodea_contig11165.755.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig11165 2321..3602 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig11165.755.1 ID=prot_S-dermatodea_contig11165.755.1|Name=mRNA_S-dermatodea_contig11165.755.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=157bp
QVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDK
TTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPT
NIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNV
DLGALMA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001509	Epimerase_deHydtase
IPR036291	NAD(P)-bd_dom_sf