mRNA_S-dermatodea_contig11165.755.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A2I6RJN1_SACJA (GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A2I6RJN1_SACJA) HSP 1 Score: 331 bits (848), Expect = 1.610e-112 Identity = 154/156 (98.72%), Postives = 155/156 (99.36%), Query Frame = 1
Query: 1 QVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM 468
+VGGLFSNLKYKVEFFRENILINDNVMECCRIYKV KLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM
Sbjct: 78 RVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM 233
BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A6H5JCJ7_9PHAE (GFS protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ7_9PHAE) HSP 1 Score: 323 bits (827), Expect = 5.670e-111 Identity = 152/157 (96.82%), Postives = 153/157 (97.45%), Query Frame = 1
Query: 4 VGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYK--EEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM 468
VGGLFSNLKYKVEFFRENILINDNVMECCRIYKV KLVSCLSTCIFPDKTTYPIDETMVHNGPPH SNEGYAYAKRMIDVLNRCYK +EYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM
Sbjct: 10 VGGLFSNLKYKVEFFRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKVPDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM 166
BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A836C923_9STRA (GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C923_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.010e-96 Identity = 131/156 (83.97%), Postives = 145/156 (92.95%), Query Frame = 1
Query: 1 QVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALM 468
+VGGLF+NLKYKVEF+REN+LINDNVMECCRIYKV KLVSCLSTC+FPDKTTYPIDETMVH GPPH SNEGYAYAKRMIDV+NRCY++EYGCNFTSVIPTNIYGK DNFSID GHV+PGLIHKC+ A++ G +WG+GSPLRQFIYNVDLGALM
Sbjct: 63 KVGGLFNNLKYKVEFYRENMLINDNVMECCRIYKVQKLVSCLSTCVFPDKTTYPIDETMVHAGPPHSSNEGYAYAKRMIDVMNRCYRDEYGCNFTSVIPTNIYGKHDNFSIDGGHVIPGLIHKCFLAEKNGTPFTIWGSGSPLRQFIYNVDLGALM 218
BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A7S3H4T7_9STRA (GDP-L-fucose synthase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4T7_9STRA) HSP 1 Score: 275 bits (704), Expect = 1.020e-90 Identity = 124/154 (80.52%), Postives = 138/154 (89.61%), Query Frame = 1
Query: 4 VGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGAL 465
VGGLF NLKYKVEF+REN+LINDNVMEC R + VVKLVSCLSTCIFPDKTTYPIDETMVH+GPPH SN GYAYAKRMIDV+N+CY EEYGCN+TS+IPTNIYG DNF I++GHV+PGLIHKCYKAK+ G DL +WGTGSPLRQFIY+ DL L
Sbjct: 71 VGGLFKNLKYKVEFYRENVLINDNVMECSREFNVVKLVSCLSTCIFPDKTTYPIDETMVHDGPPHSSNAGYAYAKRMIDVVNKCYNEEYGCNYTSIIPTNIYGPHDNFGIEDGHVIPGLIHKCYKAKRDGTDLTIWGTGSPLRQFIYSEDLARL 224
BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A6T7DWV8_9STRA (GDP-L-fucose synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DWV8_9STRA) HSP 1 Score: 277 bits (709), Expect = 1.090e-90 Identity = 123/155 (79.35%), Postives = 143/155 (92.26%), Query Frame = 1
Query: 1 QVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGAL 465
+VGGLF+N K+KVEF+R+NI+INDNVMECCRI+ V KLVSCLSTCIFPDKTTYPIDETMVH+GPPH SNEGYAYAKRMIDVLNRCY +EYGCN TS+IPTNIYG DNF+I+NGHV+PGLIHK + AKQ+GEDLH+WG+G+PLRQFI++ DL AL
Sbjct: 130 KVGGLFANQKFKVEFYRDNIIINDNVMECCRIFGVRKLVSCLSTCIFPDKTTYPIDETMVHDGPPHKSNEGYAYAKRMIDVLNRCYSDEYGCNMTSIIPTNIYGPHDNFNIENGHVIPGLIHKAFLAKQSGEDLHIWGSGTPLRQFIFSQDLAAL 284
BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A7S4EAF3_9STRA (GDP-L-fucose synthase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAF3_9STRA) HSP 1 Score: 274 bits (700), Expect = 4.010e-90 Identity = 124/154 (80.52%), Postives = 138/154 (89.61%), Query Frame = 1
Query: 4 VGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGAL 465
VGGLF+N+ KVEF+REN+L+NDNVMECCRIYKV KLVSCLSTCIFPDKTTYPIDETM+H+G PH+SNEGYAYAKRMIDV+NRCYK+EYGCNFTSVIPTNIYG DN+SI GHV+PGLIHKCY AK+ G VWGTGSPLRQFIY+ DL AL
Sbjct: 73 VGGLFANMSKKVEFYRENMLMNDNVMECCRIYKVQKLVSCLSTCIFPDKTTYPIDETMIHDGAPHLSNEGYAYAKRMIDVMNRCYKDEYGCNFTSVIPTNIYGPHDNYSIQGGHVVPGLIHKCYLAKKNGTPFEVWGTGSPLRQFIYSGDLAAL 226
BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A7S2WX89_9STRA (GDP-L-fucose synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WX89_9STRA) HSP 1 Score: 271 bits (694), Expect = 2.670e-88 Identity = 120/155 (77.42%), Postives = 139/155 (89.68%), Query Frame = 1
Query: 1 QVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGAL 465
+VGGLF+N+ KVEF+REN+LINDNVMECCRI+KV KLVSCLSTCIFPDKT+YPIDE+MVHNGPPHVSNEGYAYAKR+IDV+NRCY +EYGC T++IPTNIYG DNFSI NGHV+P LIHK Y AKQ G D ++WG+G+PLRQFI+N DLGAL
Sbjct: 139 KVGGLFANMNEKVEFYRENVLINDNVMECCRIFKVQKLVSCLSTCIFPDKTSYPIDESMVHNGPPHVSNEGYAYAKRLIDVMNRCYSDEYGCKMTAIIPTNIYGPHDNFSIKNGHVIPSLIHKAYLAKQTGGDFNIWGSGTPLRQFIFNQDLGAL 293
BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A812VCK5_9DINO (GDP-L-fucose synthase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VCK5_9DINO) HSP 1 Score: 267 bits (683), Expect = 1.040e-87 Identity = 119/156 (76.28%), Postives = 138/156 (88.46%), Query Frame = 1
Query: 4 VGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMA 471
VGGLF NLKYKVEF+R N L+NDNVMECC+ +KV KLVSC+STCIFPDKTTYPIDETMVH+GPPH SNEGYAYAKRMIDV+NRCY++EYGCNFT+VIPTN+YG DNF+I++GHV+PGLIHK YKAK G +L +WGTG PLRQFI++ DL L A
Sbjct: 77 VGGLFRNLKYKVEFYRHNTLMNDNVMECCKDHKVKKLVSCVSTCIFPDKTTYPIDETMVHDGPPHRSNEGYAYAKRMIDVMNRCYRDEYGCNFTAVIPTNVYGPHDNFNIEDGHVVPGLIHKAYKAKAEGSELTIWGTGKPLRQFIFSEDLARLTA 232
BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A813BQ17_9DINO (GDP-L-fucose synthase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BQ17_9DINO) HSP 1 Score: 266 bits (679), Expect = 4.340e-87 Identity = 119/156 (76.28%), Postives = 135/156 (86.54%), Query Frame = 1
Query: 4 VGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMA 471
VGGLF NLKYKVEF+R N L+NDN+MEC R +KV KLVSCLSTCIFPDKTTYPIDETMVHNGPPH SNEGYAYAKRMID +NRCY EEYGC FTS+IPTNIYG DNFSI++GHV+PGLIHKCY A++ G +WG+G+PLRQFIY++DL L A
Sbjct: 62 VGGLFRNLKYKVEFYRYNTLMNDNIMECARKFKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNEGYAYAKRMIDTMNRCYNEEYGCKFTSIIPTNIYGPHDNFSIEDGHVIPGLIHKCYNAERDGTPFTIWGSGTPLRQFIYSLDLARLTA 217
BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Match: A0A7S2GAW9_9STRA (GDP-L-fucose synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GAW9_9STRA) HSP 1 Score: 267 bits (683), Expect = 5.780e-87 Identity = 120/155 (77.42%), Postives = 138/155 (89.03%), Query Frame = 1
Query: 1 QVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGAL 465
+VGGLF+N+ KVEF+REN+LINDNVMECCR +KV KLVSCLSTC+FPDKTTYPIDETMVH+GPPHVSNEGYAYAKRMIDV+NRCY E+YGCN TS+IPTNIYG DNFSI+ GHV+PGLIHK Y AK+ G L +WG+G+PLRQFI+N DLG L
Sbjct: 111 KVGGLFANMSQKVEFYRENMLINDNVMECCRKFKVDKLVSCLSTCVFPDKTTYPIDETMVHSGPPHVSNEGYAYAKRMIDVMNRCYAEQYGCNMTSIIPTNIYGPHDNFSIEGGHVIPGLIHKAYLAKKNGTVLSIWGSGTPLRQFIFNRDLGEL 265 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11165.755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11165.755.1 >prot_S-dermatodea_contig11165.755.1 ID=prot_S-dermatodea_contig11165.755.1|Name=mRNA_S-dermatodea_contig11165.755.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=157bp QVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVVKLVSCLSTCIFPDKback to top mRNA from alignment at S-dermatodea_contig11165:2321..3602- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11165.755.1 ID=mRNA_S-dermatodea_contig11165.755.1|Name=mRNA_S-dermatodea_contig11165.755.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1282bp|location=Sequence derived from alignment at S-dermatodea_contig11165:2321..3602- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11165:2321..3602- >mRNA_S-dermatodea_contig11165.755.1 ID=mRNA_S-dermatodea_contig11165.755.1|Name=mRNA_S-dermatodea_contig11165.755.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at S-dermatodea_contig11165:2321..3602- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |