prot_S-dermatodea_contig111.720.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig111.720.1
Unique Name	prot_S-dermatodea_contig111.720.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	209

Homology

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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: D7G6B0_ECTSI (KH type-2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B0_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 1.000e-126
Identity = 188/191 (98.43%), Postives = 191/191 (100.00%), Query Frame = 0

Query:    5 VSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 195
            +SKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRF+FPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAK+MKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT
Sbjct:    1 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 191

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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: A0A7S2UUD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUD3_9STRA)

HSP 1 Score: 341 bits (875), Expect = 3.450e-117
Identity = 174/195 (89.23%), Postives = 185/195 (94.87%), Query Frame = 0

Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 195
            M +N+SKKRKFVADGVFYAELN+LLT ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRF+F DDAVELYAERVA RGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV+V+GKLRAQRAKSMKFRDGYMIKSG  + +YVD+AVRHV+MRQGVLGV VSIMLPHDPT
Sbjct:    1 MASNISKKRKFVADGVFYAELNQLLTSELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFNFADDAVELYAERVANRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVVVSGKLRAQRAKSMKFRDGYMIKSGAAQREYVDYAVRHVLMRQGVLGVKVSIMLPHDPT 195

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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: A0A836CGW2_9STRA (Prokaryotic type K homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW2_9STRA)

HSP 1 Score: 334 bits (856), Expect = 2.430e-114
Identity = 171/195 (87.69%), Postives = 182/195 (93.33%), Query Frame = 0

Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 195
            M TN+SKKRKFVADGVFYAELNEL+ +ELAE+GY+GVEVRVTPLRTEIII AT+PQNVLGEKGQRIRELTSVVQKRFSFPD+AVELYAERVA RGLCAQTQAESLKYKL+GGLAVRRACYGVLRFIMESGAKGAEVIV+GKLRA RAK+MKF DGYMIKSGR   DYVD AVRHV MRQG+LGV V IMLPHDPT
Sbjct:    1 MTTNISKKRKFVADGVFYAELNELMRRELAEDGYSGVEVRVTPLRTEIIIRATQPQNVLGEKGQRIRELTSVVQKRFSFPDNAVELYAERVAVRGLCAQTQAESLKYKLVGGLAVRRACYGVLRFIMESGAKGAEVIVSGKLRAARAKAMKFADGYMIKSGRATVDYVDRAVRHVAMRQGMLGVIVRIMLPHDPT 195

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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: A0A6V2VE19_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VE19_HETAK)

HSP 1 Score: 332 bits (851), Expect = 1.510e-113
Identity = 169/195 (86.67%), Postives = 184/195 (94.36%), Query Frame = 0

Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 195
            M  N+SKKRKFVADGVFYAELNELLT+ELAE+GYAG+EVR TP+RTEIII ATR Q+VLGEKGQRIRELTSVVQKRF+F DDAVELYAERVA RGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIV+GKLRAQRAK+MKFRDGYMIKSG+  +DYVD+AVRHV+MRQGVLGV VSIM+ HDP+
Sbjct:    1 MAPNISKKRKFVADGVFYAELNELLTRELAEDGYAGLEVRTTPIRTEIIIRATRTQSVLGEKGQRIRELTSVVQKRFNFNDDAVELYAERVANRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVSGKLRAQRAKAMKFRDGYMIKSGQASKDYVDYAVRHVLMRQGVLGVKVSIMMQHDPS 195

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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: W7TS51_9STRA (40s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS51_9STRA)

HSP 1 Score: 331 bits (849), Expect = 5.300e-113
Identity = 165/194 (85.05%), Postives = 182/194 (93.81%), Query Frame = 0

Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDP 194
            M TN+SKKRKF+ADGVFYAELNELLT+ELAE+GYAGVEVRV PLRTEIIISATR QNVLGEKGQRIRELT+V+QKRF+FPD  VEL+AE+VA RGLCAQ QAESLKYKLLGGLAVRRACYGVLRF+ME GAKGAEVIV+GKLRAQRAKSMKF+DGYMIKSG+ + +YVD+AVRHV+MRQGVLGV V IMLPHDP
Sbjct:    1 MTTNISKKRKFIADGVFYAELNELLTRELAEDGYAGVEVRVVPLRTEIIISATRTQNVLGEKGQRIRELTTVIQKRFNFPDGVVELFAEKVASRGLCAQAQAESLKYKLLGGLAVRRACYGVLRFVMEQGAKGAEVIVSGKLRAQRAKSMKFQDGYMIKSGQAKREYVDYAVRHVLMRQGVLGVKVKIMLPHDP 194

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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: F0YDG3_AURAN (KH type-2 domain-containing protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YDG3_AURAN)

HSP 1 Score: 318 bits (816), Expect = 3.690e-108
Identity = 162/192 (84.38%), Postives = 176/192 (91.67%), Query Frame = 0

Query:    2 VTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHD 193
            +  +SKKRKFVADG+FYAELNELLT+ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRF F D AVELYAERVA RGLCAQ QAESLKYKLLGGLAVRRACYGV+RF+MESGAKG EV+V+GKLRAQRAK+MKF DGYMIK+G  + +YVD AVRHV+MRQGVLGV VSIMLPHD
Sbjct:    1 MATISKKRKFVADGLFYAELNELLTRELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRACYGVVRFVMESGAKGVEVVVSGKLRAQRAKAMKFTDGYMIKTGHSKREYVDSAVRHVLMRQGVLGVKVSIMLPHD 192

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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: M4B627_HYAAE (KH type-2 domain-containing protein n=26 Tax=Eukaryota TaxID=2759 RepID=M4B627_HYAAE)

HSP 1 Score: 311 bits (797), Expect = 5.160e-105
Identity = 156/195 (80.00%), Postives = 175/195 (89.74%), Query Frame = 0

Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 195
            M  N+SKKRKFVADGVFYAELNELL +EL  +GY+GVEVRVTP+RTEIII ATR Q VLGEKGQRIR LTSVVQKRF+FPD AVELYAERVA RGLC+Q QAESLKY+LLGGLAVRRACY V+RF+ME+GAKG +VIV+GKLRAQRAK+MKF +GYM+K+G   ++YVD AVRHVMMRQGVLGV VSIMLPHDPT
Sbjct:    1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLGEKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACYSVVRFVMEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVMMRQGVLGVKVSIMLPHDPT 195

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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: A0A024UIL6_9STRA (40S ribosomal protein S3 n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UIL6_9STRA)

HSP 1 Score: 310 bits (795), Expect = 7.640e-105
Identity = 157/195 (80.51%), Postives = 177/195 (90.77%), Query Frame = 0

Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 195
            M  N+SKKRKFVADGVF+AELNELL +ELAE+GYAGVEVRVTPLRTE+II AT+ Q VLGEKGQRIRELTSVVQKRF+F D AVELYAERVA RGLCAQ QAESLKYKLLGGLAVRRA  GVLRF++E+GAKG EVIV+GKLRAQRAK+MKF++G+M+K+G   ++YVD AVRHV+MRQGVLGV VSIMLPHDPT
Sbjct:    1 MALNISKKRKFVADGVFFAELNELLQRELAEDGYAGVEVRVTPLRTEVIIRATKTQEVLGEKGQRIRELTSVVQKRFNFADGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRAAMGVLRFVLEAGAKGCEVIVSGKLRAQRAKAMKFKEGFMVKTGDANKEYVDTAVRHVLMRQGVLGVKVSIMLPHDPT 195

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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: A0A024G886_9STRA (KH type-2 domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024G886_9STRA)

HSP 1 Score: 309 bits (792), Expect = 2.780e-104
Identity = 156/195 (80.00%), Postives = 176/195 (90.26%), Query Frame = 0

Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 195
            M TN+SKKRKFVADGVFYAELNELL +EL  +GY+GVEVRVTPLRTEIII ATR Q VLGEKGQRIRELTSVVQKRF+F + +VELYAER+A RGLC+Q QAESLKY+LL GLAVRRACY VLRF+ME+GAKG EVIV+GKLRAQRAKSMKF++GYM+K+G  R++YVD AVRHV+MRQGVLGV VSIMLP DPT
Sbjct:    1 MATNISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPLRTEIIIRATRTQEVLGEKGQRIRELTSVVQKRFNFAEGSVELYAERIANRGLCSQAQAESLKYRLLEGLAVRRACYSVLRFVMEAGAKGCEVIVSGKLRAQRAKSMKFKEGYMVKTGNARQEYVDTAVRHVLMRQGVLGVKVSIMLPQDPT 195

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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: A0A7S2RY40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY40_9STRA)

HSP 1 Score: 309 bits (792), Expect = 2.980e-104
Identity = 156/191 (81.68%), Postives = 173/191 (90.58%), Query Frame = 0

Query:    4 NVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDP 194
            N+SKKRKFVADGVFYAELNE L +ELAEEGYAGVE+R TP+RTEIII ATR Q+VLGEKG+RIRELTSVVQKRF+F D AVELYAERVA +GLCAQ QAESLKYKL+GGLAVRRACYGVLRFIMESGA GAEV V+GK R QRAK+MKF+DGYMIK+G+V ++YVD AVRHV+MR GVLGV V IMLPHDP
Sbjct:   22 NISKKRKFVADGVFYAELNEFLIRELAEEGYAGVEIRATPIRTEIIIRATRTQSVLGEKGRRIRELTSVVQKRFNFADGAVELYAERVANKGLCAQAQAESLKYKLIGGLAVRRACYGVLRFIMESGANGAEVTVSGKARGQRAKAMKFQDGYMIKTGKVAQEYVDTAVRHVLMRLGVLGVRVEIMLPHDP 212

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6B0_ECTSI	1.000e-126	98.43	KH type-2 domain-containing protein n=1 Tax=Ectoca...	[more]
A0A7S2UUD3_9STRA	3.450e-117	89.23	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A836CGW2_9STRA	2.430e-114	87.69	Prokaryotic type K homology domain-containing prot...	[more]
A0A6V2VE19_HETAK	1.510e-113	86.67	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
W7TS51_9STRA	5.300e-113	85.05	40s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae...	[more]
F0YDG3_AURAN	3.690e-108	84.38	KH type-2 domain-containing protein n=2 Tax=Pelago...	[more]
M4B627_HYAAE	5.160e-105	80.00	KH type-2 domain-containing protein n=26 Tax=Eukar...	[more]
A0A024UIL6_9STRA	7.640e-105	80.51	40S ribosomal protein S3 n=8 Tax=Saprolegniaceae T...	[more]
A0A024G886_9STRA	2.780e-104	80.00	KH type-2 domain-containing protein n=2 Tax=Albugo...	[more]
A0A7S2RY40_9STRA	2.980e-104	81.68	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 20..94 e-value: 3.5E-12 score: 46.0
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 21..92 score: 12.181
IPR005703	Ribosomal protein S3, eukaryotic/archaeal	TIGRFAM	TIGR01008	TIGR01008	coord: 8..192 e-value: 4.9E-68 score: 226.7
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 1..92 e-value: 6.5E-45 score: 153.1
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 93..203 e-value: 5.4E-55 score: 187.0
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 93..192
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 106..188 e-value: 1.3E-21 score: 76.9
None	No IPR available	PANTHER	PTHR11760:SF41		coord: 1..195
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 1..195
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 10..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig111	contig	S-dermatodea_contig111:29294..31943 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig111.720.1	mRNA_S-dermatodea_contig111.720.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig111 29294..31943 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig111.720.1 ID=prot_S-dermatodea_contig111.720.1|Name=mRNA_S-dermatodea_contig111.720.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=209bp
MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIII
SATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQT
QAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSM
KFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTVSLAL
HELFCPYV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004044	KH_dom_type_2
IPR005703	Ribosomal_S3_euk/arc
IPR015946	KH_dom-like_a/b
IPR036419	Ribosomal_S3_C_sf
IPR001351	Ribosomal_S3_C
IPR009019	KH_sf_prok-type