mRNA_S-dermatodea_contig111.720.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig111.720.1
Unique NamemRNA_S-dermatodea_contig111.720.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: D7G6B0_ECTSI (KH type-2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B0_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 1.000e-126
Identity = 188/191 (98.43%), Postives = 191/191 (100.00%), Query Frame = 1 
Query:   13 VSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 585
            +SKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRF+FPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAK+MKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT
Sbjct:    1 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 191
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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: A0A7S2UUD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUD3_9STRA)

HSP 1 Score: 341 bits (875), Expect = 3.450e-117
Identity = 174/195 (89.23%), Postives = 185/195 (94.87%), Query Frame = 1 
Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 585
            M +N+SKKRKFVADGVFYAELN+LLT ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRF+F DDAVELYAERVA RGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV+V+GKLRAQRAKSMKFRDGYMIKSG  + +YVD+AVRHV+MRQGVLGV VSIMLPHDPT
Sbjct:    1 MASNISKKRKFVADGVFYAELNQLLTSELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFNFADDAVELYAERVANRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVVVSGKLRAQRAKSMKFRDGYMIKSGAAQREYVDYAVRHVLMRQGVLGVKVSIMLPHDPT 195
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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: A0A836CGW2_9STRA (Prokaryotic type K homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW2_9STRA)

HSP 1 Score: 334 bits (856), Expect = 2.430e-114
Identity = 171/195 (87.69%), Postives = 182/195 (93.33%), Query Frame = 1 
Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 585
            M TN+SKKRKFVADGVFYAELNEL+ +ELAE+GY+GVEVRVTPLRTEIII AT+PQNVLGEKGQRIRELTSVVQKRFSFPD+AVELYAERVA RGLCAQTQAESLKYKL+GGLAVRRACYGVLRFIMESGAKGAEVIV+GKLRA RAK+MKF DGYMIKSGR   DYVD AVRHV MRQG+LGV V IMLPHDPT
Sbjct:    1 MTTNISKKRKFVADGVFYAELNELMRRELAEDGYSGVEVRVTPLRTEIIIRATQPQNVLGEKGQRIRELTSVVQKRFSFPDNAVELYAERVAVRGLCAQTQAESLKYKLVGGLAVRRACYGVLRFIMESGAKGAEVIVSGKLRAARAKAMKFADGYMIKSGRATVDYVDRAVRHVAMRQGMLGVIVRIMLPHDPT 195
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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: A0A6V2VE19_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VE19_HETAK)

HSP 1 Score: 332 bits (851), Expect = 1.510e-113
Identity = 169/195 (86.67%), Postives = 184/195 (94.36%), Query Frame = 1 
Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 585
            M  N+SKKRKFVADGVFYAELNELLT+ELAE+GYAG+EVR TP+RTEIII ATR Q+VLGEKGQRIRELTSVVQKRF+F DDAVELYAERVA RGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIV+GKLRAQRAK+MKFRDGYMIKSG+  +DYVD+AVRHV+MRQGVLGV VSIM+ HDP+
Sbjct:    1 MAPNISKKRKFVADGVFYAELNELLTRELAEDGYAGLEVRTTPIRTEIIIRATRTQSVLGEKGQRIRELTSVVQKRFNFNDDAVELYAERVANRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVSGKLRAQRAKAMKFRDGYMIKSGQASKDYVDYAVRHVLMRQGVLGVKVSIMMQHDPS 195
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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: W7TS51_9STRA (40s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS51_9STRA)

HSP 1 Score: 331 bits (849), Expect = 5.300e-113
Identity = 165/194 (85.05%), Postives = 182/194 (93.81%), Query Frame = 1 
Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDP 582
            M TN+SKKRKF+ADGVFYAELNELLT+ELAE+GYAGVEVRV PLRTEIIISATR QNVLGEKGQRIRELT+V+QKRF+FPD  VEL+AE+VA RGLCAQ QAESLKYKLLGGLAVRRACYGVLRF+ME GAKGAEVIV+GKLRAQRAKSMKF+DGYMIKSG+ + +YVD+AVRHV+MRQGVLGV V IMLPHDP
Sbjct:    1 MTTNISKKRKFIADGVFYAELNELLTRELAEDGYAGVEVRVVPLRTEIIISATRTQNVLGEKGQRIRELTTVIQKRFNFPDGVVELFAEKVASRGLCAQAQAESLKYKLLGGLAVRRACYGVLRFVMEQGAKGAEVIVSGKLRAQRAKSMKFQDGYMIKSGQAKREYVDYAVRHVLMRQGVLGVKVKIMLPHDP 194
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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: F0YDG3_AURAN (KH type-2 domain-containing protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YDG3_AURAN)

HSP 1 Score: 318 bits (816), Expect = 3.690e-108
Identity = 162/192 (84.38%), Postives = 176/192 (91.67%), Query Frame = 1 
Query:    4 VTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHD 579
            +  +SKKRKFVADG+FYAELNELLT+ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRF F D AVELYAERVA RGLCAQ QAESLKYKLLGGLAVRRACYGV+RF+MESGAKG EV+V+GKLRAQRAK+MKF DGYMIK+G  + +YVD AVRHV+MRQGVLGV VSIMLPHD
Sbjct:    1 MATISKKRKFVADGLFYAELNELLTRELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRACYGVVRFVMESGAKGVEVVVSGKLRAQRAKAMKFTDGYMIKTGHSKREYVDSAVRHVLMRQGVLGVKVSIMLPHD 192
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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: M4B627_HYAAE (KH type-2 domain-containing protein n=26 Tax=Eukaryota TaxID=2759 RepID=M4B627_HYAAE)

HSP 1 Score: 311 bits (797), Expect = 5.160e-105
Identity = 156/195 (80.00%), Postives = 175/195 (89.74%), Query Frame = 1 
Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 585
            M  N+SKKRKFVADGVFYAELNELL +EL  +GY+GVEVRVTP+RTEIII ATR Q VLGEKGQRIR LTSVVQKRF+FPD AVELYAERVA RGLC+Q QAESLKY+LLGGLAVRRACY V+RF+ME+GAKG +VIV+GKLRAQRAK+MKF +GYM+K+G   ++YVD AVRHVMMRQGVLGV VSIMLPHDPT
Sbjct:    1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLGEKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACYSVVRFVMEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVMMRQGVLGVKVSIMLPHDPT 195
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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: A0A024UIL6_9STRA (40S ribosomal protein S3 n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UIL6_9STRA)

HSP 1 Score: 310 bits (795), Expect = 7.640e-105
Identity = 157/195 (80.51%), Postives = 177/195 (90.77%), Query Frame = 1 
Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 585
            M  N+SKKRKFVADGVF+AELNELL +ELAE+GYAGVEVRVTPLRTE+II AT+ Q VLGEKGQRIRELTSVVQKRF+F D AVELYAERVA RGLCAQ QAESLKYKLLGGLAVRRA  GVLRF++E+GAKG EVIV+GKLRAQRAK+MKF++G+M+K+G   ++YVD AVRHV+MRQGVLGV VSIMLPHDPT
Sbjct:    1 MALNISKKRKFVADGVFFAELNELLQRELAEDGYAGVEVRVTPLRTEVIIRATKTQEVLGEKGQRIRELTSVVQKRFNFADGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRAAMGVLRFVLEAGAKGCEVIVSGKLRAQRAKAMKFKEGFMVKTGDANKEYVDTAVRHVLMRQGVLGVKVSIMLPHDPT 195
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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: A0A024G886_9STRA (KH type-2 domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024G886_9STRA)

HSP 1 Score: 309 bits (792), Expect = 2.780e-104
Identity = 156/195 (80.00%), Postives = 176/195 (90.26%), Query Frame = 1 
Query:    1 MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPT 585
            M TN+SKKRKFVADGVFYAELNELL +EL  +GY+GVEVRVTPLRTEIII ATR Q VLGEKGQRIRELTSVVQKRF+F + +VELYAER+A RGLC+Q QAESLKY+LL GLAVRRACY VLRF+ME+GAKG EVIV+GKLRAQRAKSMKF++GYM+K+G  R++YVD AVRHV+MRQGVLGV VSIMLP DPT
Sbjct:    1 MATNISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPLRTEIIIRATRTQEVLGEKGQRIRELTSVVQKRFNFAEGSVELYAERIANRGLCSQAQAESLKYRLLEGLAVRRACYSVLRFVMEAGAKGCEVIVSGKLRAQRAKSMKFKEGYMVKTGNARQEYVDTAVRHVLMRQGVLGVKVSIMLPQDPT 195
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BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Match: A0A7S2RY40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY40_9STRA)

HSP 1 Score: 309 bits (792), Expect = 2.980e-104
Identity = 156/191 (81.68%), Postives = 173/191 (90.58%), Query Frame = 1 
Query:   10 NVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDP 582
            N+SKKRKFVADGVFYAELNE L +ELAEEGYAGVE+R TP+RTEIII ATR Q+VLGEKG+RIRELTSVVQKRF+F D AVELYAERVA +GLCAQ QAESLKYKL+GGLAVRRACYGVLRFIMESGA GAEV V+GK R QRAK+MKF+DGYMIK+G+V ++YVD AVRHV+MR GVLGV V IMLPHDP
Sbjct:   22 NISKKRKFVADGVFYAELNEFLIRELAEEGYAGVEIRATPIRTEIIIRATRTQSVLGEKGRRIRELTSVVQKRFNFADGAVELYAERVANKGLCAQAQAESLKYKLIGGLAVRRACYGVLRFIMESGANGAEVTVSGKARGQRAKAMKFQDGYMIKTGKVAQEYVDTAVRHVLMRLGVLGVRVEIMLPHDP 212
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig111.720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6B0_ECTSI1.000e-12698.43KH type-2 domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2UUD3_9STRA3.450e-11789.23Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CGW2_9STRA2.430e-11487.69Prokaryotic type K homology domain-containing prot... [more]
A0A6V2VE19_HETAK1.510e-11386.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TS51_9STRA5.300e-11385.0540s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae... [more]
F0YDG3_AURAN3.690e-10884.38KH type-2 domain-containing protein n=2 Tax=Pelago... [more]
M4B627_HYAAE5.160e-10580.00KH type-2 domain-containing protein n=26 Tax=Eukar... [more]
A0A024UIL6_9STRA7.640e-10580.5140S ribosomal protein S3 n=8 Tax=Saprolegniaceae T... [more]
A0A024G886_9STRA2.780e-10480.00KH type-2 domain-containing protein n=2 Tax=Albugo... [more]
A0A7S2RY40_9STRA2.980e-10481.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig111contigS-dermatodea_contig111:29294..31943 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score368.6
Seed ortholog evalue1.9e-99
Seed eggNOG ortholog2880.D7G6B0
Preferred nameRPS3
KEGG koko:K02985
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
GOsGO:0000054,GO:0000056,GO:0000184,GO:0000226,GO:0000302,GO:0000702,GO:0000956,GO:0001726,GO:0001817,GO:0001819,GO:0001932,GO:0001934,GO:0002181,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003723,GO:0003729,GO:0003735,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005783,GO:0005789,GO:0005791,GO:0005819,GO:0005829,GO:0005840,GO:0005844,GO:0005856,GO:0005886,GO:0005911,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006355,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006407,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006611,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006970,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0008017,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0008534,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0015931,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016363,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0016829,GO:0016835,GO:0017148,GO:0019104,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0019866,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022407,GO:0022409,GO:0022607,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030054,GO:0030155,GO:0030162,GO:0030425,GO:0030544,GO:0030684,GO:0030686,GO:0030688,GO:0030867,GO:0031072,GO:0031090,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031334,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031503,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032069,GO:0032070,GO:0032071,GO:0032075,GO:0032077,GO:0032079,GO:0032268,GO:0032269,GO:0032270,GO:0032271,GO:0032273,GO:0032356,GO:0032357,GO:0032358,GO:0032587,GO:0032663,GO:0032743,GO:0032872,GO:0032874,GO:0032886,GO:0032944,GO:0032946,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0033674,GO:0033750,GO:0034097,GO:0034248,GO:0034249,GO:0034399,GO:0034599,GO:0034612,GO:0034613,GO:0034614,GO:0034641,GO:0034645,GO:0034655,GO:0035690,GO:0036477,GO:0042102,GO:0042104,GO:0042127,GO:0042129,GO:0042175,GO:0042221,GO:0042254,GO:0042325,GO:0042327,GO:0042493,GO:0042542,GO:0042769,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043043,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043506,GO:0043507,GO:0043523,GO:0043524,GO:0043549,GO:0043603,GO:0043604,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044390,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045047,GO:0045184,GO:0045738,GO:0045739,GO:0045785,GO:0045859,GO:0045860,GO:0045862,GO:0045934,GO:0045935,GO:0045937,GO:0046006,GO:0046328,GO:0046330,GO:0046483,GO:0046677,GO:0046700,GO:0046907,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050657,GO:0050658,GO:0050670,GO:0050671,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050854,GO:0050856,GO:0050857,GO:0050862,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051018,GO:0051029,GO:0051052,GO:0051053,GO:0051054,GO:0051090,GO:0051091,GO:0051092,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051251,GO:0051252,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051493,GO:0051495,GO:0051536,GO:0051540,GO:0051606,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051716,GO:0051879,GO:0052547,GO:0052548,GO:0055044,GO:0060255,GO:0060548,GO:0061481,GO:0065007,GO:0065009,GO:0070013,GO:0070181,GO:0070301,GO:0070302,GO:0070304,GO:0070507,GO:0070663,GO:0070665,GO:0070727,GO:0070848,GO:0070887,GO:0070925,GO:0070972,GO:0071159,GO:0071166,GO:0071236,GO:0071310,GO:0071345,GO:0071356,GO:0071363,GO:0071426,GO:0071428,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0072686,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:0090304,GO:0090305,GO:0097064,GO:0097100,GO:0097159,GO:0097237,GO:0097447,GO:0097458,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098590,GO:0098827,GO:0120025,GO:0120038,GO:0140078,GO:0140097,GO:1900117,GO:1900119,GO:1901214,GO:1901215,GO:1901222,GO:1901224,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901700,GO:1901701,GO:1902229,GO:1902231,GO:1902531,GO:1902533,GO:1902544,GO:1902546,GO:1902903,GO:1902905,GO:1903037,GO:1903039,GO:1903320,GO:1903321,GO:1903506,GO:1905051,GO:1905053,GO:1990089,GO:1990090,GO:1990904,GO:2000112,GO:2000113,GO:2000116,GO:2001020,GO:2001021,GO:2001022,GO:2001056,GO:2001141,GO:2001233,GO:2001235,GO:2001242,GO:2001244,GO:2001270,GO:2001272
EggNOG free text desc.oxidized purine nucleobase lesion DNA N-glycosylase activity
EggNOG OGsCOG0092@1,KOG3181@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibosomal protein S3, C-terminal
Ec32 orthologEc-10_001190.1
Exons6
Model size627
Cds size627
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig111.720.1prot_S-dermatodea_contig111.720.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig111 29294..31943 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924187.4295523-CDS-S-dermatodea_contig111:29293..294241622924187.4295523-CDS-S-dermatodea_contig111:29293..29424Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig111 29294..29424 -
1694079078.1239371-CDS-S-dermatodea_contig111:29293..294241694079078.1239371-CDS-S-dermatodea_contig111:29293..29424Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig111 29294..29424 -
1622924187.4384046-CDS-S-dermatodea_contig111:29786..298771622924187.4384046-CDS-S-dermatodea_contig111:29786..29877Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig111 29787..29877 -
1694079078.1378152-CDS-S-dermatodea_contig111:29786..298771694079078.1378152-CDS-S-dermatodea_contig111:29786..29877Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig111 29787..29877 -
1622924187.4480374-CDS-S-dermatodea_contig111:30615..307171622924187.4480374-CDS-S-dermatodea_contig111:30615..30717Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig111 30616..30717 -
1694079078.1466017-CDS-S-dermatodea_contig111:30615..307171694079078.1466017-CDS-S-dermatodea_contig111:30615..30717Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig111 30616..30717 -
1622924187.4608016-CDS-S-dermatodea_contig111:31196..312721622924187.4608016-CDS-S-dermatodea_contig111:31196..31272Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig111 31197..31272 -
1694079078.1565714-CDS-S-dermatodea_contig111:31196..312721694079078.1565714-CDS-S-dermatodea_contig111:31196..31272Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig111 31197..31272 -
1622924187.4688625-CDS-S-dermatodea_contig111:31516..316741622924187.4688625-CDS-S-dermatodea_contig111:31516..31674Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig111 31517..31674 -
1694079078.1745234-CDS-S-dermatodea_contig111:31516..316741694079078.1745234-CDS-S-dermatodea_contig111:31516..31674Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig111 31517..31674 -
1622924187.4769602-CDS-S-dermatodea_contig111:31874..319431622924187.4769602-CDS-S-dermatodea_contig111:31874..31943Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig111 31875..31943 -
1694079078.1825488-CDS-S-dermatodea_contig111:31874..319431694079078.1825488-CDS-S-dermatodea_contig111:31874..31943Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig111 31875..31943 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig111.720.1

>prot_S-dermatodea_contig111.720.1 ID=prot_S-dermatodea_contig111.720.1|Name=mRNA_S-dermatodea_contig111.720.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=209bp
MVTNVSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIII
SATRPQNVLGEKGQRIRELTSVVQKRFSFPDDAVELYAERVAKRGLCAQT
QAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSM
KFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTVSLAL
HELFCPYV*
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mRNA from alignment at S-dermatodea_contig111:29294..31943-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig111.720.1 ID=mRNA_S-dermatodea_contig111.720.1|Name=mRNA_S-dermatodea_contig111.720.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2650bp|location=Sequence derived from alignment at S-dermatodea_contig111:29294..31943- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTGACCAACGTGTCGAAGAAGCGCAAGTTCGTGGCGGACGGTGTCTT
CTACGCCGAGCTGAACGAGGTGAGCCGTTGCCGCACGCATGCCTTCCACA
GATTAACACCCAGCGCTGCTCTCCACCGAATTCCTGCCCTCCACCGAATC
TCTGCCCCTCCTGAAATACCTCCGTTGTGAAGAACACATCGCAAACGAAT
TGCCAAAAACTGAAGCTCTGCCCTGCCCCCTACCCTGTCTGCTGTGTGCT
CTGCTGTGTGCTTCCACAGCTCCTTACCCAGGAGCTTGCGGAGGAGGGAT
ACGCTGGGGTGGAGGTGCGCGTGACGCCCCTCCGCACTGAGATCATCATC
AGCGCCACCCGCCCGCAGAACGTGCTCGGCGAGAAGGGCCAGCGCATCAG
GGAGCTCACCTCCGTGGTGCAGAAGCGGTACGTTTTCCTGCCCTGCGTCG
TTCCTGTTATTGGCTCTCTTGCTCGCCTGCTCTACAATGCGCCTCCTTCA
TACTTGCAGTCATGAGAAATTAAGGTTTCGACGCACCCCTATATTAGTAT
TAATAGTATGCCCGGCTGATATGTAGATAAAAGTGCCCGTGTACTCGCGG
GAGAAAAAACGACCCCTGTATGTCACGCGCGTGTGGTCGTTCTTCTCCTT
TGCTCCTTACCGTGTCGACAGTTTTAGCTTCCCCGACGACGCTGTTGAGC
TCTACGCGGAGCGAGTCGCGAAGCGTGGGCTGTGCGCGCAGACCCAGGTG
AGACCTTGTGTTCGATGGACTCGCGATTCGACAAAACCGAAGAGCTTCCC
AAGCAGAGGGGCAGCCATCGCTGCATCCAAGACCACTGTGATAGTCAGTC
CTATGATAGCTCTAACGGCATATTCGGGTCGTTCCTCTGTAGAGAGCGCC
CAGTCGGCCACAGTAGATGCGTGAGCTGGGGTTTTGCCAATGTGAGTCAT
TCCACACCGACAACCTCCTGCTGTGAGTGGCAGGGATGAGATGCTGCAGC
AGCGGTAATTTGCGCAACTTTTCAAATTCAGGCACTCGAAACCGTGGTTT
GTTGCGCTCATGTGTGGCAGAAGGCGCGAAATATACGCCGTGTTGGGCTT
CATACAACTCCTTCATGGAGGTGGTTTAGATTGGGCATCGCTTATTTGCC
AGCACGCCTCCCGCAAAGCACGTTAGGTACATATTTCCTTTGCCTCATAT
TTGACCCTCGTCATAAATAAACGCAGGCCGAGTCCCTCAAATACAAGCTT
TTGGGCGGACTTGCCGTGCGCCGCGCGTGCTATGGAGTCCTGCGCTTCAT
CATGGAGTCTGGCGCCAAGGGAGCCGAGGTAAGCAAGCTTTGAAAGCTCA
CTTCTGCTGACGTCGCGGCTGTACTCGAAATGTCGGCCAGTATAGATGGA
AGGGCCAATGGCCTGCGGTGAGGGAAAAGTAGCTTCTGTAATTATTTGTT
CTCCGTGGGGATACCCGCACTTGGTCCAATATGGTGTTCAGGCCCACGAT
ACTCACAAGGTCTCGGTGAGCGTTTCTTAGAGGTCCCGGGGGCTTCAAGC
TTCTGGATCCTCTGCTACGGCCAGGGGTTTTCGTTGCGGCCTTCTAAGCC
CATTCTCGAGGTCTTGTGCGTGCCCACCTGGAAAATGGCCTTGCATAAGG
CTGCATCCGCGAAAGGCACAAGTAACCGAAAGCGACCGCGCAAGTAGCAT
CGGACATACCACAAAAACACTGTAAGCCGAACTCGAACGCCAACAAAGAT
GCCATGTGTACTGATGAGTGTGCATGGTTTTTCGGTTGCGTGCTTTATCG
GCCATCTAACGGCGCACCCTCGGTTTCTGGACCTGTTGCAGTATGTATGT
GCACATTAGTAGTAGCATGTGCTTCACAAATCAGATGGCACAAAGTCGCC
ACGAAAGAGTCCCCGTCCTGACACCCGTAGAATTTGGGGTAGCTCCTGTT
CGGGGCCTGATCAAGCCAGCCAGGCAAGCCTTTTGGTACCTACATACTCC
ACACGAGACCATCTACCGGCATCTGTCCTAGTTTGTAGACTAACGTGGGT
CCTTTTCTGCAATCAGGTGATCGTGGCTGGTAAGCTGAGGGCGCAGCGTG
CGAAGTCCATGAAGTTCCGCGACGGTTACATGATCAAGAGCGGACGCGTC
AGGGAGGGTGAGTGCTTGTAGCTCCTTTGATGTGACGCTTGTGGCCTGTT
GGGCTCTAACGGTAGGAGGCAACTAGGCAGTCTTGAGCGTACAAGGCAGG
GGGCAGTGGCAATGCGGTTCAGGCGTTCGTTTAGCAGACACAGCGGCCAA
GAAGATGGAGCGCCGCCCACAGTCCAACAAGAAAGAACGAGATTGCGCGC
CGACTTGTTCGCTGTACGGTTACAATACAATGGAAAAAAAAATTGTATCC
CACCTGCGCAGTGTAGCGTTACTCCCATTATAGTATCATAGTCGAGGTGC
CGCTTACGCTTACAAACCTTGACCTCTTGATTCTATGTTGTCGCCTGTCG
ATCATTTTCGATCCGCCAGACTACGTGGACCACGCCGTGCGCCACGTCAT
GATGCGCCAGGGTGTTCTGGGTGTCACCGTCTCCATCATGCTTCCCCACG
ACCCCACCGTAAGTCTTGCGCTGCATGAACTGTTTTGCCCGTATGTTTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig111:29294..31943-

>mRNA_S-dermatodea_contig111.720.1 ID=mRNA_S-dermatodea_contig111.720.1|Name=mRNA_S-dermatodea_contig111.720.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1254bp|location=Sequence derived from alignment at S-dermatodea_contig111:29294..31943- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTGACCAACGTGTCGAAGAAGCGCAAGTTCGTGGCGGACGGTGTCTT
CTACGCCGAGCTGAACGAGATGGTGACCAACGTGTCGAAGAAGCGCAAGT
TCGTGGCGGACGGTGTCTTCTACGCCGAGCTGAACGAGCTCCTTACCCAG
GAGCTTGCGGAGGAGGGATACGCTGGGGTGGAGGTGCGCGTGACGCCCCT
CCGCACTGAGATCATCATCAGCGCCACCCGCCCGCAGAACGTGCTCGGCG
AGAAGGGCCAGCGCATCAGGGAGCTCACCTCCGTGGTGCAGAAGCGCTCC
TTACCCAGGAGCTTGCGGAGGAGGGATACGCTGGGGTGGAGGTGCGCGTG
ACGCCCCTCCGCACTGAGATCATCATCAGCGCCACCCGCCCGCAGAACGT
GCTCGGCGAGAAGGGCCAGCGCATCAGGGAGCTCACCTCCGTGGTGCAGA
AGCGTTTTAGCTTCCCCGACGACGCTGTTGAGCTCTACGCGGAGCGAGTC
GCGAAGCGTGGGCTGTGCGCGCAGACCCAGTTTTAGCTTCCCCGACGACG
CTGTTGAGCTCTACGCGGAGCGAGTCGCGAAGCGTGGGCTGTGCGCGCAG
ACCCAGGCCGAGTCCCTCAAATACAAGCTTTTGGGCGGACTTGCCGTGCG
CCGCGCGTGCTATGGAGTCCTGCGCTTCATCATGGAGTCTGGCGCCAAGG
GAGCCGAGGCCGAGTCCCTCAAATACAAGCTTTTGGGCGGACTTGCCGTG
CGCCGCGCGTGCTATGGAGTCCTGCGCTTCATCATGGAGTCTGGCGCCAA
GGGAGCCGAGGTGATCGTGGCTGGTAAGCTGAGGGCGCAGCGTGCGAAGT
CCATGAAGTTCCGCGACGGTTACATGATCAAGAGCGGACGCGTCAGGGAG
GGTGATCGTGGCTGGTAAGCTGAGGGCGCAGCGTGCGAAGTCCATGAAGT
TCCGCGACGGTTACATGATCAAGAGCGGACGCGTCAGGGAGGACTACGTG
GACCACGCCGTGCGCCACGTCATGATGCGCCAGGGTGTTCTGGGTGTCAC
CGTCTCCATCATGCTTCCCCACGACCCCACCGTAAGTCTTGCGCTGCATG
AACTGTTTTGCCCGTATGTTTGAACTACGTGGACCACGCCGTGCGCCACG
TCATGATGCGCCAGGGTGTTCTGGGTGTCACCGTCTCCATCATGCTTCCC
CACGACCCCACCGTAAGTCTTGCGCTGCATGAACTGTTTTGCCCGTATGT
TTGA
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