prot_S-dermatodea_contig11029.683.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11029.683.1
Unique Nameprot_S-dermatodea_contig11029.683.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length89
Homology
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BLAST of mRNA_S-dermatodea_contig11029.683.1 vs. uniprot
Match: D8LRG0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRG0_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.460e-22
Identity = 56/93 (60.22%), Postives = 62/93 (66.67%), Query Frame = 0 
Query:    1 MVKSAIKMAALGALAAAAPSTATG----GLDLLQTVQKGARSSTVPRVSKQDIWLEDRSAGRLQNTRG-HLTPPPAFDPWQGFYAAEVAAFSC 88
            M KSAIK      LA AAPS A      GLDLL  V  G ++    RV+KQDIWLE+RSAGRLQNTR  HL P   FD WQG+Y+AEVAAFSC
Sbjct:    1 MTKSAIKCITAATLAFAAPSAAASRNGSGLDLLHNV--GGKNQ---RVAKQDIWLEERSAGRLQNTRQEHLAPSIFFDQWQGYYSAEVAAFSC 88
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11029.683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRG0_ECTSI1.460e-2260.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..88
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11029contigS-dermatodea_contig11029:2002..4204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11029.683.1mRNA_S-dermatodea_contig11029.683.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11029 1128..4330 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11029.683.1 ID=prot_S-dermatodea_contig11029.683.1|Name=mRNA_S-dermatodea_contig11029.683.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=89bp
MVKSAIKMAALGALAAAAPSTATGGLDLLQTVQKGARSSTVPRVSKQDIW
LEDRSAGRLQNTRGHLTPPPAFDPWQGFYAAEVAAFSC*
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