prot_S-dermatodea_contig1100.661.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1100.661.1
Unique Nameprot_S-dermatodea_contig1100.661.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length110
Homology
BLAST of mRNA_S-dermatodea_contig1100.661.1 vs. uniprot
Match: D7FVJ7_ECTSI (PFtsY, plastid signal recognition particle receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ7_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 9.720e-55
Identity = 98/108 (90.74%), Postives = 104/108 (96.30%), Query Frame = 0
Query:    2 TAAITFADPAVGGPSVLFFMGANGMGKTTTVGKVASRLREEGGQKVLLAAADTFRAAAVEQLMEWADRSGADIVTPLDSDERPPSVVSRAAEKAVNEGYDVLIVDTSG 109
            TAAITFADP++G PSVLFFMGANGMGKTTTVGKVASRLRE+GGQKVLLAAADTFRAAAVEQL EWA+RSGADIV PLD DERPPSVV+RAAEKAV+EGYDVLIVDTSG
Sbjct:  236 TAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLREDGGQKVLLAAADTFRAAAVEQLNEWAERSGADIVVPLDKDERPPSVVARAAEKAVSEGYDVLIVDTSG 343          
BLAST of mRNA_S-dermatodea_contig1100.661.1 vs. uniprot
Match: A0A6H5KTL2_9PHAE (SRP54 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL2_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 7.510e-53
Identity = 98/119 (82.35%), Postives = 104/119 (87.39%), Query Frame = 0
Query:    2 TAAITFADPAVGGPSVLFFMGANGMGKTTTVGKVASRLREEGGQKVLLAAADTFR-----------AAAVEQLMEWADRSGADIVTPLDSDERPPSVVSRAAEKAVNEGYDVLIVDTSG 109
            TAAITFADP++G PSVLFFMGANGMGKTTTVGKVASRLRE+GGQKVLLAAADTFR           AAAVEQL EWA+RSGADIV PLD DERPPSVV+RAAEKAV+EGYDVLIVDTSG
Sbjct:  139 TAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLREDGGQKVLLAAADTFRIEVIXXXXXXXAAAVEQLNEWAERSGADIVVPLDKDERPPSVVARAAEKAVSEGYDVLIVDTSG 257          
BLAST of mRNA_S-dermatodea_contig1100.661.1 vs. uniprot
Match: A0A835ZC86_9STRA (PFtsY, plastid signal recognition particle receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC86_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.410e-34
Identity = 72/106 (67.92%), Postives = 84/106 (79.25%), Query Frame = 0
Query:    4 AITFADPAVGGPSVLFFMGANGMGKTTTVGKVASRLREEGGQKVLLAAADTFRAAAVEQLMEWADRSGADIVTPLDSDERPPSVVSRAAEKAVNEGYDVLIVDTSG 109
            AI FA    G PSVLF MGANGMGKTTT+GK+A+RL+ +   KVLL AADTFRAAAVEQL EW++R+  DIV PLDS+ERP SV  RA E+AV  GYDV++VDTSG
Sbjct:  151 AIKFAPADSGVPSVLFVMGANGMGKTTTIGKIAARLKGQ-DLKVLLCAADTFRAAAVEQLEEWSNRAEVDIVKPLDSEERPESVAQRACERAVEGGYDVVVVDTSG 255          
BLAST of mRNA_S-dermatodea_contig1100.661.1 vs. uniprot
Match: A0A7S0G1Y3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G1Y3_9RHOD)

HSP 1 Score: 117 bits (294), Expect = 7.670e-30
Identity = 61/95 (64.21%), Postives = 75/95 (78.95%), Query Frame = 0
Query:   15 PSVLFFMGANGMGKTTTVGKVASRLREEGGQKVLLAAADTFRAAAVEQLMEWADRSGADIVTPLDSDERPPSVVSRAAEKAVNEGYDVLIVDTSG 109
            P+V+ F+GANGMGKTTTVGK+A+R R+E G++VLLAA DTFRAAAVEQL  WADR+  DIV PL+  + P S   RA +K   EGYDV+I+DTSG
Sbjct:  159 PTVVVFVGANGMGKTTTVGKLATRYRKE-GKRVLLAACDTFRAAAVEQLATWADRADVDIVKPLEGAKNPSSTAFRAVKKGQEEGYDVVIIDTSG 252          
BLAST of mRNA_S-dermatodea_contig1100.661.1 vs. uniprot
Match: A0A7S2EN25_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EN25_TRICV)

HSP 1 Score: 119 bits (299), Expect = 9.700e-30
Identity = 62/105 (59.05%), Postives = 78/105 (74.29%), Query Frame = 0
Query:    5 ITFADPAVGGPSVLFFMGANGMGKTTTVGKVASRLREEGGQKVLLAAADTFRAAAVEQLMEWADRSGADIVTPLDSDERPPSVVSRAAEKAVNEGYDVLIVDTSG 109
            + FA+   G P+VLF MGANGMGKTTT+GK+ASRLR EGGQKVL+AA DTFRA AVEQL  WADR+  +  +P +  + P +V+  + + A+  GYD LIVDTSG
Sbjct:  170 VKFAEEGEGCPTVLFVMGANGMGKTTTIGKLASRLRNEGGQKVLVAACDTFRAGAVEQLEMWADRAEVECYSPSEEKKTPAAVLYGSLDAAIAGGYDTLIVDTSG 274          
BLAST of mRNA_S-dermatodea_contig1100.661.1 vs. uniprot
Match: A0A7S2ZSH4_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZSH4_9RHOD)

HSP 1 Score: 117 bits (293), Expect = 4.480e-29
Identity = 61/95 (64.21%), Postives = 75/95 (78.95%), Query Frame = 0
Query:   15 PSVLFFMGANGMGKTTTVGKVASRLREEGGQKVLLAAADTFRAAAVEQLMEWADRSGADIVTPLDSDERPPSVVSRAAEKAVNEGYDVLIVDTSG 109
            P+V+ F+GANGMGKTTTVGK+ +R ++E G+KVLLAA DTFRAAAVEQL  WADR+  DIV PL+  + P S   RA +KA  EGYDV+I+DTSG
Sbjct:  208 PTVVVFVGANGMGKTTTVGKLGTRYKKE-GKKVLLAACDTFRAAAVEQLATWADRAEVDIVKPLEGAKNPSSTAFRAVKKAQEEGYDVVIIDTSG 301          
BLAST of mRNA_S-dermatodea_contig1100.661.1 vs. uniprot
Match: A0A7S2BL25_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BL25_9STRA)

HSP 1 Score: 118 bits (296), Expect = 5.450e-29
Identity = 66/109 (60.55%), Postives = 78/109 (71.56%), Query Frame = 0
Query:    4 AITFADP---AVGGPSVLFFMGANGMGKTTTVGKVASRLREEGGQKVLLAAADTFRAAAVEQLMEWADRSGADIVTPLDSDERPPSVVSRAAEKAVNEGYDVLIVDTSG 109
            AI FA P   A G P+VLF +GANGMGKTTT+GK+A RLR E GQKVLLAA DTFRAAAVEQL  W++R+  D   P    ++P  V+  A +KA+   YDVLIVDTSG
Sbjct:  248 AIAFASPEERANGMPTVLFVIGANGMGKTTTIGKLAHRLRNESGQKVLLAACDTFRAAAVEQLEMWSERAEVDFTGPRSDKDKPAFVLGAAIDKAIEGKYDVLIVDTSG 356          
BLAST of mRNA_S-dermatodea_contig1100.661.1 vs. uniprot
Match: A0A7S4JMD3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JMD3_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.110e-28
Identity = 60/95 (63.16%), Postives = 75/95 (78.95%), Query Frame = 0
Query:   15 PSVLFFMGANGMGKTTTVGKVASRLREEGGQKVLLAAADTFRAAAVEQLMEWADRSGADIVTPLDSDERPPSVVSRAAEKAVNEGYDVLIVDTSG 109
            P+VLF MGANGMGKTTT+GK+ASRLR EGGQKVL+AA DTFRA AVEQL  WADR+  D  +P +S + P +V+  + + A++ GYD +IVDTSG
Sbjct:  231 PTVLFVMGANGMGKTTTIGKLASRLRNEGGQKVLVAACDTFRAGAVEQLEMWADRAEVDCFSPNESQKSPAAVLYGSLDLALSGGYDTVIVDTSG 325          
BLAST of mRNA_S-dermatodea_contig1100.661.1 vs. uniprot
Match: A0A1Z5K4J0_FISSO (Fused signal recognition particle receptor n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K4J0_FISSO)

HSP 1 Score: 115 bits (289), Expect = 3.290e-28
Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 0
Query:   15 PSVLFFMGANGMGKTTTVGKVASRLREEGGQKVLLAAADTFRAAAVEQLMEWADRSGADIVTPLDSDERPPSVVSRAAEKAVNEGYDVLIVDTSG 109
            P+VLF +GANGMGKTTT+GK+A RLR EG Q VL+AA DTFRA AV QL +WADR+  D+V P D+ + P +V+  A +KAV E YD L+VDTSG
Sbjct:  181 PTVLFILGANGMGKTTTIGKLAHRLRTEGNQTVLVAACDTFRAGAVAQLQQWADRAQVDLVGPTDTVKSPAAVLYSALDKAVLEKYDTLLVDTSG 275          
BLAST of mRNA_S-dermatodea_contig1100.661.1 vs. uniprot
Match: B7G5P8_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5P8_PHATC)

HSP 1 Score: 112 bits (279), Expect = 8.310e-28
Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 0
Query:   15 PSVLFFMGANGMGKTTTVGKVASRLREEGGQKVLLAAADTFRAAAVEQLMEWADRSGADIVTPLDSDERPPSVVSRAAEKAVNEGYDVLIVDTSG 109
            P+VLF MGANGMGKTTT+GK+A RLR EG Q VLLAA DTFRA AVEQL +WA+R+  D+V P      P +V+  A +K + E YD ++VDTSG
Sbjct:   95 PTVLFVMGANGMGKTTTIGKLAHRLRNEGNQTVLLAACDTFRAGAVEQLQQWAERAQVDMVGPSTKVTTPSAVLYAALDKGIAEKYDTILVDTSG 189          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1100.661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVJ7_ECTSI9.720e-5590.74PFtsY, plastid signal recognition particle recepto... [more]
A0A6H5KTL2_9PHAE7.510e-5382.35SRP54 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZC86_9STRA2.410e-3467.92PFtsY, plastid signal recognition particle recepto... [more]
A0A7S0G1Y3_9RHOD7.670e-3064.21Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S2EN25_TRICV9.700e-3059.05Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2ZSH4_9RHOD4.480e-2964.21Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
A0A7S2BL25_9STRA5.450e-2960.55Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4JMD3_9STRA1.110e-2863.16Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A1Z5K4J0_FISSO3.290e-2862.11Fused signal recognition particle receptor n=2 Tax... [more]
B7G5P8_PHATC8.310e-2860.00Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 15..109
e-value: 1.7E-7
score: -36.1
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 15..109
e-value: 4.0E-29
score: 101.7
NoneNo IPR availableGENE3D3.40.50.300coord: 11..109
e-value: 2.0E-31
score: 111.1
NoneNo IPR availablePANTHERPTHR43134FAMILY NOT NAMEDcoord: 13..109
IPR004390Signal-recognition particle receptor FtsYPANTHERPTHR43134:SF7CELL DIVISION PROTEIN FTSY HOMOLOG, CHLOROPLASTICcoord: 13..109
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1100contigS-dermatodea_contig1100:1090..2150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1100.661.1mRNA_S-dermatodea_contig1100.661.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1100 1090..2150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1100.661.1 ID=prot_S-dermatodea_contig1100.661.1|Name=mRNA_S-dermatodea_contig1100.661.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=110bp
STAAITFADPAVGGPSVLFFMGANGMGKTTTVGKVASRLREEGGQKVLLA
AADTFRAAAVEQLMEWADRSGADIVTPLDSDERPPSVVSRAAEKAVNEGY
DVLIVDTSG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000897SRP54_GTPase_dom
IPR004390SR_rcpt_FtsY
IPR027417P-loop_NTPase