prot_S-dermatodea_contig11.653.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11.653.1
Unique Nameprot_S-dermatodea_contig11.653.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length156
Homology
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: D8LI27_ECTSI (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI27_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 6.380e-89
Identity = 127/147 (86.39%), Postives = 137/147 (93.20%), Query Frame = 0
Query:    9 EKWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 155
            E+WV +LPI EAP  G AKSVYVADLDLCVAADE+GLLYV+GNKCPPANQPLSFS VSNNIIKDPVLGTKIDIETGDV+EWCP+LLGKLLSPILG +P+NAGVQTF+VR K GNLEAKVNVNAKAEFE SYWTGILDAQGKADGGY+
Sbjct:   48 EQWVPILPIDEAPTPGTAKSVYVADLDLCVAADERGLLYVLGNKCPPANQPLSFSLVSNNIIKDPVLGTKIDIETGDVIEWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 194          
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A8J9X0V7_PHATR (Hypothetical protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X0V7_PHATR)

HSP 1 Score: 154 bits (390), Expect = 1.590e-45
Identity = 78/147 (53.06%), Postives = 103/147 (70.07%), Query Frame = 0
Query:   11 WVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVS-NNIIKDPVLGTKIDIETGDVV-EWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 155
            +V  +P++E P  G A S     L +C+A D+KG +Y +G+KCPP NQPLSF  V+ +  I+DPVLGTK  ++TGDVV  WCPS +GKLL    GG    +GV T+ VR + G+LE +V+VN KA FE SYWTG+LDAQGK+DG Y+
Sbjct:    1 YVPCIPLSELPKPGSATSGIAGGLAICIAVDKKGSVYALGDKCPPVNQPLSFGKVNPDGTIQDPVLGTKFSLKTGDVVGAWCPSGIGKLL----GGAFTPSGVPTYPVRQRGGSLEVQVDVNYKANFEKSYWTGVLDAQGKSDGTYY 143          
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A7S3P6K4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6K4_9STRA)

HSP 1 Score: 154 bits (390), Expect = 9.290e-45
Identity = 79/155 (50.97%), Postives = 100/155 (64.52%), Query Frame = 0
Query:    1 MAAARGPQEKWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 155
            MAA   P  K+V  +PI + P  G A S     L +C+A DEKG +Y +G+KCPP NQPLSF  V    I DPVLG+K D++TG+VV WCPS LGKLL    GG     GV T+ V+     +E +V+VN K  FEA+YW+GILDAQGK +G Y+
Sbjct:   51 MAAKYKPALKYVPCIPIEQLPKPGSATSGEAGGLAICIAVDEKGAIYALGDKCPPVNQPLSFGKVEGGCISDPVLGSKFDLKTGEVVSWCPSGLGKLL----GGAFSPTGVVTYPVKKSGKFVEVQVDVNYKFNFEANYWSGILDAQGKDNGKYY 201          
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A7S1DYV2_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1DYV2_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.100e-44
Identity = 75/149 (50.34%), Postives = 104/149 (69.80%), Query Frame = 0
Query:    8 QEKWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNN-IIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 155
            ++K+V  L + + P  G A S     L +C+A D KG +Y +G+KCPP NQPLSF  V+N+  I+DPVLGTK  ++TGDVV WCP+ +GK    I+GG  +  GV  F VR  +G ++ +V+VNAKA FEA+YW+G+LDAQGKA+G Y+
Sbjct:   51 KKKFVPCLSLKDLPKPGFATSGVAGGLAICIAVDPKGSVYALGDKCPPVNQPLSFGKVNNDGTIEDPVLGTKFSLKTGDVVSWCPTGVGK----IIGGLFEPTGVPNFKVRQSSGTIQVEVDVNAKANFEANYWSGVLDAQGKANGKYY 195          
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A7R9VVY4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVY4_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.190e-44
Identity = 75/147 (51.02%), Postives = 99/147 (67.35%), Query Frame = 0
Query:   10 KWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVV-EWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 155
            K+V  +P+ + P  G A S     L +C+A D  G +Y +G+KCPP NQPLSF  V+   I+DPVLGTK  ++TG+VV +WCPS +GKLL    GG  +  GV  F V+    N+E +V+VNAKA FE+ YW+GILDAQGKADG Y+
Sbjct:   44 KYVPCIPVEQLPKPGTATSGVAGGLAICIAVDPSGSIYALGDKCPPVNQPLSFGKVTAGAIEDPVLGTKFSLKTGEVVGDWCPSGIGKLL----GGLFEPVGVPVFPVKKSGANIEVQVDVNAKANFESQYWSGILDAQGKADGKYY 186          
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A7S0AYK8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AYK8_9STRA)

HSP 1 Score: 152 bits (385), Expect = 5.300e-44
Identity = 74/147 (50.34%), Postives = 100/147 (68.03%), Query Frame = 0
Query:   10 KWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVV-EWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 155
            ++V  +P+ + P  G A S     L +C+A D  G +Y +G+KCPP NQPLSF  V  N I+DPVLGTK  ++TG+VV  WCPS +GKLL    GG  D  GV T+ V+ K  N+E +V+VNAKA FE+ YW+G+LDAQGK++G Y+
Sbjct:   59 QYVPCIPVDKLPAPGSATSGVAGGLAICIAVDPSGSVYALGDKCPPVNQPLSFGRVDGNSIEDPVLGTKFSLKTGEVVGAWCPSGIGKLL----GGLFDPIGVPTYPVKKKGANIEVQVDVNAKANFESQYWSGVLDAQGKSNGKYY 201          
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A1Z5JA31_FISSO (Rieske domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JA31_FISSO)

HSP 1 Score: 151 bits (381), Expect = 1.220e-43
Identity = 73/142 (51.41%), Postives = 98/142 (69.01%), Query Frame = 0
Query:   15 LPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVS-NNIIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 155
            +P+++ P  G+A S     L +C+A D KG +Y +G+KCPP NQPLSF  V+ +  I+DP+LGTK  ++TGDVV WCPS +GK    ILGG     GV  + VR + GN+E +V+VNAK  FEA+YW+GILDAQGK  G Y+
Sbjct:   45 IPLSDLPKPGKATSGVAGGLAICIAVDSKGSVYALGDKCPPINQPLSFGKVNADGTIEDPLLGTKFSLKTGDVVSWCPSGIGK----ILGGAFSPTGVPVYPVRQRGGNIEVQVDVNAKYNFEANYWSGILDAQGKDTGTYY 182          
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A6U5FSV0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5FSV0_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.410e-43
Identity = 73/146 (50.00%), Postives = 100/146 (68.49%), Query Frame = 0
Query:   10 KWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 155
            K+V V+   +AP  G A S     L +CVA    G LY +G+KCPP NQPLSF  V+ + I+DPVLGTK  ++TG+VV+WCP+ +GKL+    GG  + AGV T+ ++S   N+E +V+VN K  FEA YW+G+LDAQGKA+G Y+
Sbjct:   46 KYVPVITKEQAPKPGSATSGVAGGLAICVACSPTGQLYALGDKCPPVNQPLSFGKVNKDTIEDPVLGTKFSLKTGEVVDWCPAGIGKLV----GGLFEPAGVPTYPIKSTGKNIEVQVDVNYKLNFEAEYWSGVLDAQGKANGKYY 187          
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A6U3SB47_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3SB47_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.280e-42
Identity = 72/150 (48.00%), Postives = 100/150 (66.67%), Query Frame = 0
Query:    6 GPQEKWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 155
            GP+ +++  +   + P  G A S     L +C+A DEKG ++ +G+KCPP NQPLSF  V    I DPVLGT+ D++TG+VV WCPS LGKL+    GG  D  GV  + V++K  ++  +V+VN KA FEA YW+GILDAQGK++G Y+
Sbjct:   34 GPKLQYMPCISTDDLPAPGSATSGVAGGLAICIAVDEKGSVFALGDKCPPVNQPLSFGKVVGGTIADPVLGTQFDLKTGEVVSWCPSGLGKLI----GGIFDPVGVPVYPVQAKGKSVNVQVDVNYKANFEADYWSGILDAQGKSNGKYY 179          
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: B8CBE4_THAPS (Rieske domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBE4_THAPS)

HSP 1 Score: 147 bits (372), Expect = 2.640e-42
Identity = 74/147 (50.34%), Postives = 98/147 (66.67%), Query Frame = 0
Query:   10 KWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNN-IIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 155
            ++V  +  A+ P  G A S     L +C+A D KG +Y +G+KCPP NQPLSF  V  +  I DPVLGTK D++TG+VV WCP+ LGKL+    GG  D  GV  + V++K   +E +V+VN KA FEA YW+GILDAQGKA+G Y+
Sbjct:   38 QYVPCISTADLPKPGSATSGVAGGLAICIAVDPKGAVYALGDKCPPVNQPLSFGKVDKDGTIADPVLGTKFDLKTGEVVSWCPTGLGKLI----GGLFDPVGVPVYPVKAKGSVVEVQVDVNYKANFEAEYWSGILDAQGKANGKYY 180          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI27_ECTSI6.380e-8986.39Rieske domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A8J9X0V7_PHATR1.590e-4553.06Hypothetical protein n=3 Tax=Phaeodactylum tricorn... [more]
A0A7S3P6K4_9STRA9.290e-4550.97Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1DYV2_9STRA1.100e-4450.34Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
A0A7R9VVY4_9STRA1.190e-4451.02Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0AYK8_9STRA5.300e-4450.34Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A1Z5JA31_FISSO1.220e-4351.41Rieske domain-containing protein n=2 Tax=Fistulife... [more]
A0A6U5FSV0_9STRA1.410e-4350.00Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A6U3SB47_9STRA1.280e-4248.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8CBE4_THAPS2.640e-4250.34Rieske domain-containing protein n=1 Tax=Thalassio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012748Rieske-like [2Fe-2S] domain, NirD-typePFAMPF13806Rieske_2coord: 10..124
e-value: 1.3E-9
score: 37.9
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 7..135
e-value: 1.4E-7
score: 33.3
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 10..125
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 9..134
NoneNo IPR availablePANTHERPTHR21496:SF22coord: 9..134
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 11..125
score: 10.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11contigS-dermatodea_contig11:46969..47436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11.653.1mRNA_S-dermatodea_contig11.653.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11 46969..47448 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11.653.1 ID=prot_S-dermatodea_contig11.653.1|Name=mRNA_S-dermatodea_contig11.653.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=156bp
MAAARGPQEKWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIG
NKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVVEWCPSLLGKLLSP
ILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKA
DGGYF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012748Rieske-like_NirD
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S