mRNA_S-dermatodea_contig11.653.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: D8LI27_ECTSI (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI27_ECTSI) HSP 1 Score: 267 bits (683), Expect = 2.620e-89 Identity = 132/159 (83.02%), Postives = 143/159 (89.94%), Query Frame = 1
Query: 1 QALEMAAARGPQEKWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 477
Q L MAA+ E+WV +LPI EAP G AKSVYVADLDLCVAADE+GLLYV+GNKCPPANQPLSFS VSNNIIKDPVLGTKIDIETGDV+EWCP+LLGKLLSPILG +P+NAGVQTF+VR K GNLEAKVNVNAKAEFE SYWTGILDAQGKADGGY+
Sbjct: 39 QGLSMAASG---EQWVPILPIDEAPTPGTAKSVYVADLDLCVAADERGLLYVLGNKCPPANQPLSFSLVSNNIIKDPVLGTKIDIETGDVIEWCPNLLGKLLSPILGAQPENAGVQTFVVRQKGGNLEAKVNVNAKAEFEKSYWTGILDAQGKADGGYY 194
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A7S3P6K4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6K4_9STRA) HSP 1 Score: 157 bits (397), Expect = 9.410e-46 Identity = 81/158 (51.27%), Postives = 102/158 (64.56%), Query Frame = 1
Query: 4 ALEMAAARGPQEKWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 477
AL MAA P K+V +PI + P G A S L +C+A DEKG +Y +G+KCPP NQPLSF V I DPVLG+K D++TG+VV WCPS LGKLL GG GV T+ V+ +E +V+VN K FEA+YW+GILDAQGK +G Y+
Sbjct: 48 ALNMAAKYKPALKYVPCIPIEQLPKPGSATSGEAGGLAICIAVDEKGAIYALGDKCPPVNQPLSFGKVEGGCISDPVLGSKFDLKTGEVVSWCPSGLGKLL----GGAFSPTGVVTYPVKKSGKFVEVQVDVNYKFNFEANYWSGILDAQGKDNGKYY 201
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A8J9X0V7_PHATR (Hypothetical protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X0V7_PHATR) HSP 1 Score: 154 bits (390), Expect = 1.850e-45 Identity = 78/147 (53.06%), Postives = 103/147 (70.07%), Query Frame = 1
Query: 43 WVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVS-NNIIKDPVLGTKIDIETGDVV-EWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 477
+V +P++E P G A S L +C+A D+KG +Y +G+KCPP NQPLSF V+ + I+DPVLGTK ++TGDVV WCPS +GKLL GG +GV T+ VR + G+LE +V+VN KA FE SYWTG+LDAQGK+DG Y+
Sbjct: 1 YVPCIPLSELPKPGSATSGIAGGLAICIAVDKKGSVYALGDKCPPVNQPLSFGKVNPDGTIQDPVLGTKFSLKTGDVVGAWCPSGIGKLL----GGAFTPSGVPTYPVRQRGGSLEVQVDVNYKANFEKSYWTGVLDAQGKSDGTYY 143
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A7R9VVY4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVY4_9STRA) HSP 1 Score: 154 bits (390), Expect = 6.900e-45 Identity = 79/159 (49.69%), Postives = 103/159 (64.78%), Query Frame = 1
Query: 4 ALEMAAARGPQEKWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVV-EWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 477
AL MA K+V +P+ + P G A S L +C+A D G +Y +G+KCPP NQPLSF V+ I+DPVLGTK ++TG+VV +WCPS +GKLL GG + GV F V+ N+E +V+VNAKA FE+ YW+GILDAQGKADG Y+
Sbjct: 32 ALNMAGLFQQSLKYVPCIPVEQLPKPGTATSGVAGGLAICIAVDPSGSIYALGDKCPPVNQPLSFGKVTAGAIEDPVLGTKFSLKTGEVVGDWCPSGIGKLL----GGLFEPVGVPVFPVKKSGANIEVQVDVNAKANFESQYWSGILDAQGKADGKYY 186
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A7S1DYV2_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1DYV2_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.280e-44 Identity = 75/149 (50.34%), Postives = 104/149 (69.80%), Query Frame = 1
Query: 34 QEKWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNN-IIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 477
++K+V L + + P G A S L +C+A D KG +Y +G+KCPP NQPLSF V+N+ I+DPVLGTK ++TGDVV WCP+ +GK I+GG + GV F VR +G ++ +V+VNAKA FEA+YW+G+LDAQGKA+G Y+
Sbjct: 51 KKKFVPCLSLKDLPKPGFATSGVAGGLAICIAVDPKGSVYALGDKCPPVNQPLSFGKVNNDGTIEDPVLGTKFSLKTGDVVSWCPTGVGK----IIGGLFEPTGVPNFKVRQSSGTIQVEVDVNAKANFEANYWSGVLDAQGKANGKYY 195
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A7S0AYK8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AYK8_9STRA) HSP 1 Score: 152 bits (385), Expect = 6.150e-44 Identity = 74/147 (50.34%), Postives = 100/147 (68.03%), Query Frame = 1
Query: 40 KWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVV-EWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 477
++V +P+ + P G A S L +C+A D G +Y +G+KCPP NQPLSF V N I+DPVLGTK ++TG+VV WCPS +GKLL GG D GV T+ V+ K N+E +V+VNAKA FE+ YW+G+LDAQGK++G Y+
Sbjct: 59 QYVPCIPVDKLPAPGSATSGVAGGLAICIAVDPSGSVYALGDKCPPVNQPLSFGRVDGNSIEDPVLGTKFSLKTGEVVGAWCPSGIGKLL----GGLFDPIGVPTYPVKKKGANIEVQVDVNAKANFESQYWSGVLDAQGKSNGKYY 201
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A1Z5JA31_FISSO (Rieske domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JA31_FISSO) HSP 1 Score: 151 bits (381), Expect = 1.410e-43 Identity = 73/142 (51.41%), Postives = 98/142 (69.01%), Query Frame = 1
Query: 55 LPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVS-NNIIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 477
+P+++ P G+A S L +C+A D KG +Y +G+KCPP NQPLSF V+ + I+DP+LGTK ++TGDVV WCPS +GK ILGG GV + VR + GN+E +V+VNAK FEA+YW+GILDAQGK G Y+
Sbjct: 45 IPLSDLPKPGKATSGVAGGLAICIAVDSKGSVYALGDKCPPINQPLSFGKVNADGTIEDPLLGTKFSLKTGDVVSWCPSGIGK----ILGGAFSPTGVPVYPVRQRGGNIEVQVDVNAKYNFEANYWSGILDAQGKDTGTYY 182
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A6U5FSV0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5FSV0_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.640e-43 Identity = 73/146 (50.00%), Postives = 100/146 (68.49%), Query Frame = 1
Query: 40 KWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 477
K+V V+ +AP G A S L +CVA G LY +G+KCPP NQPLSF V+ + I+DPVLGTK ++TG+VV+WCP+ +GKL+ GG + AGV T+ ++S N+E +V+VN K FEA YW+G+LDAQGKA+G Y+
Sbjct: 46 KYVPVITKEQAPKPGSATSGVAGGLAICVACSPTGQLYALGDKCPPVNQPLSFGKVNKDTIEDPVLGTKFSLKTGEVVDWCPAGIGKLV----GGLFEPAGVPTYPIKSTGKNIEVQVDVNYKLNFEAEYWSGVLDAQGKANGKYY 187
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: A0A6U3SB47_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3SB47_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.480e-42 Identity = 72/150 (48.00%), Postives = 100/150 (66.67%), Query Frame = 1
Query: 28 GPQEKWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNNIIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 477
GP+ +++ + + P G A S L +C+A DEKG ++ +G+KCPP NQPLSF V I DPVLGT+ D++TG+VV WCPS LGKL+ GG D GV + V++K ++ +V+VN KA FEA YW+GILDAQGK++G Y+
Sbjct: 34 GPKLQYMPCISTDDLPAPGSATSGVAGGLAICIAVDEKGSVFALGDKCPPVNQPLSFGKVVGGTIADPVLGTQFDLKTGEVVSWCPSGLGKLI----GGIFDPVGVPVYPVQAKGKSVNVQVDVNYKANFEADYWSGILDAQGKSNGKYY 179
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Match: B8CBE4_THAPS (Rieske domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBE4_THAPS) HSP 1 Score: 147 bits (372), Expect = 3.060e-42 Identity = 74/147 (50.34%), Postives = 98/147 (66.67%), Query Frame = 1
Query: 40 KWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGNKCPPANQPLSFSTVSNN-IIKDPVLGTKIDIETGDVVEWCPSLLGKLLSPILGGKPDNAGVQTFLVRSKNGNLEAKVNVNAKAEFEASYWTGILDAQGKADGGYF 477
++V + A+ P G A S L +C+A D KG +Y +G+KCPP NQPLSF V + I DPVLGTK D++TG+VV WCP+ LGKL+ GG D GV + V++K +E +V+VN KA FEA YW+GILDAQGKA+G Y+
Sbjct: 38 QYVPCISTADLPKPGSATSGVAGGLAICIAVDPKGAVYALGDKCPPVNQPLSFGKVDKDGTIADPVLGTKFDLKTGEVVSWCPTGLGKLI----GGLFDPVGVPVYPVKAKGSVVEVQVDVNYKANFEAEYWSGILDAQGKANGKYY 180 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11.653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11.653.1 >prot_S-dermatodea_contig11.653.1 ID=prot_S-dermatodea_contig11.653.1|Name=mRNA_S-dermatodea_contig11.653.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=156bp MAAARGPQEKWVTVLPIAEAPPSGRAKSVYVADLDLCVAADEKGLLYVIGback to top mRNA from alignment at S-dermatodea_contig11:46969..47448- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11.653.1 ID=mRNA_S-dermatodea_contig11.653.1|Name=mRNA_S-dermatodea_contig11.653.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=480bp|location=Sequence derived from alignment at S-dermatodea_contig11:46969..47448- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11:46969..47448- >mRNA_S-dermatodea_contig11.653.1 ID=mRNA_S-dermatodea_contig11.653.1|Name=mRNA_S-dermatodea_contig11.653.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=936bp|location=Sequence derived from alignment at S-dermatodea_contig11:46969..47448- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |