prot_S-dermatodea_contig10965.637.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10965.637.1
Unique Nameprot_S-dermatodea_contig10965.637.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length276
Homology
BLAST of mRNA_S-dermatodea_contig10965.637.1 vs. uniprot
Match: D7FI24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI24_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 1.240e-37
Identity = 119/294 (40.48%), Postives = 156/294 (53.06%), Query Frame = 0
Query:    1 ASCTFTPAINERSVRLAEAHESRRTLTEAALRSGSETDGESCLSGDNPIEGDRSGSRAESNGEVGGGGAARIGGRETPSKVMTKALQLYGDHAEMEQRKEEQQREFLSRTCPFTPDIGMSAAWPAQDISTEEFVRQDRKAENATRLHNEHWARERRVQEKRYIQYHDSYSAVDPNTGQPLFSPMINKRRQNRPRSD---------------GVGQRETEENREWWRLGGGGREGTGGVTAGEEG----DPEELQGIHARLWERGLALERRREAGARVREDARKARASGGHVNGR 275
            A+CTF P INE S RLAEA E+RR L E  +R+GSE+DG          EG + GS+ E   E     A    G    SKV+ K+ +L+ +HA+ EQR+E +++E LS++CPFTPDIG+SAAWP Q+ +TE+FVR                        KRY  +   ++++DP TG+P FSPMINK    R                   GV              G G +       AG +G      ++ + IHA LWERGLALERRREA AR RE+ARK+ A+ GHV GR
Sbjct:  688 ATCTFAPEINECSRRLAEAQEARRDLLEF-VRAGSESDGRG-----GGAEG-KGGSKREDT-EAAATRAGXXAGAAR-SKVIVKSHRLHAEHADNEQRRERRRKELLSQSCPFTPDIGVSAAWPIQETTTEDFVRXXXXXXXXXXXX---------XXAKRYTLHGAPHASIDPATGRPFFSPMINKTWAGRQHXXXXXXXXXXXXWFSRHGVTXXXXXXXXXXXXAGRGAKRPGDKGKAGTDGRCFYHDDDDRPIHASLWERGLALERRREADARSREEARKSAAAAGHVGGR 963          
BLAST of mRNA_S-dermatodea_contig10965.637.1 vs. uniprot
Match: A0A6H5JGR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR6_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 9.010e-25
Identity = 73/162 (45.06%), Postives = 98/162 (60.49%), Query Frame = 0
Query:    1 ASCTFTPAINERSVRLAEAHESRRTLTEAALRSGSETDGESCLSGDNPIEGDRSGSRAESNGEVGGGGAARIGGRETPSKVMTKALQLYGDHAEMEQRKEEQQREFLSRTCPFTPDIGMSAAWPAQDISTEEFVRQDRKAENATRLHNEHWARERRVQEKRY 162
            A+CTF P INE S RLAEA E+RR L +  +R+GSE+DG                    +       GAAR       SK+M K+ +L+ DHA++EQR+E +++E LS++CPFTPDIG+SAAWP Q+ + E+FVR         RLH EH  +ERR+Q KRY
Sbjct:  826 ATCTFAPEINELSRRLAEAREARRDLLDF-VRAGSESDGSGXXXXXXXXXXXXRKDTPAAXXXXXXXGAAR-------SKIMVKSYRLHADHADIEQRRERRRKELLSQSCPFTPDIGVSAAWPIQETTKEDFVR---------RLHAEHAEQERRLQAKRY 970          
BLAST of mRNA_S-dermatodea_contig10965.637.1 vs. uniprot
Match: A0A6H5JFG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG4_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 1.500e-6
Identity = 36/65 (55.38%), Postives = 44/65 (67.69%), Query Frame = 0
Query:  211 RLGGGGREGTGGVTAGEEGDPEELQGIHARLWERGLALERRREAGARVREDARKARASGGHVNGR 275
            R GG G+  T G+    + D    + IHA LWERGLALER+REA AR RE+ARK+ A+ GHV GR
Sbjct:   49 RPGGKGKVDTDGLCFYHDDD----RSIHASLWERGLALERKREADARSREEARKSAAAAGHVGGR 109          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10965.637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI24_ECTSI1.240e-3740.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGR6_9PHAE9.010e-2545.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG4_9PHAE1.500e-655.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10965contigS-dermatodea_contig10965:4258..6935 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10965.637.1mRNA_S-dermatodea_contig10965.637.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10965 4258..6935 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10965.637.1 ID=prot_S-dermatodea_contig10965.637.1|Name=mRNA_S-dermatodea_contig10965.637.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=276bp
ASCTFTPAINERSVRLAEAHESRRTLTEAALRSGSETDGESCLSGDNPIE
GDRSGSRAESNGEVGGGGAARIGGRETPSKVMTKALQLYGDHAEMEQRKE
EQQREFLSRTCPFTPDIGMSAAWPAQDISTEEFVRQDRKAENATRLHNEH
WARERRVQEKRYIQYHDSYSAVDPNTGQPLFSPMINKRRQNRPRSDGVGQ
RETEENREWWRLGGGGREGTGGVTAGEEGDPEELQGIHARLWERGLALER
RREAGARVREDARKARASGGHVNGR*
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