prot_S-dermatodea_contig10945.624.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10945.624.1
Unique Nameprot_S-dermatodea_contig10945.624.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length174
Homology
BLAST of mRNA_S-dermatodea_contig10945.624.1 vs. uniprot
Match: A0A6H5L623_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L623_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 4.130e-33
Identity = 71/124 (57.26%), Postives = 85/124 (68.55%), Query Frame = 0
Query:   64 PPQEA---LRGGGS-------ADAGVDRVTSSSCSGVGQE---PAAIAHPYDRVLILDVDGTLYGQASGVEQQIVDGIHEFFREELGLSPAECDEVHHRHGSTIWGLQQEGRVTAGQVERYYEK 174
            PP+     +RGGG+       A AGV  V  S   G   +     A A P  RVLILDVDGTLYGQ+SGVEQQIVDGIH +F  ELGL+P EC+++H RHGST+WGLQQEGR+T  QVERYY++
Sbjct:   44 PPEHVVGGIRGGGTSRVEESTATAGVGIVKDSCSPGANTDLRSREAEAEPSQRVLILDVDGTLYGQSSGVEQQIVDGIHRYFAGELGLTPEECNDIHRRHGSTVWGLQQEGRLTQHQVERYYQE 167          
BLAST of mRNA_S-dermatodea_contig10945.624.1 vs. uniprot
Match: A0A835YST1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST1_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.080e-18
Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 0
Query:  103 RVLILDVDGTLYGQASGVEQQIVDGIHEFFREELGLSPAECDEVHHR----------HGSTIWGLQQEGRVTAGQVERYY 172
            RVL+LDVDGTLYG  +GVEQQIV  IH F  +EL ++P +CD++HHR          +GSTI GLQ EG VT  QV+ +Y
Sbjct:   35 RVLLLDVDGTLYGPEAGVEQQIVANIHRFVEQELSITPQQCDQLHHRQVNDGPKDALYGSTIEGLQAEGLVTPAQVQAFY 114          
BLAST of mRNA_S-dermatodea_contig10945.624.1 vs. uniprot
Match: A0A7S0TWR3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TWR3_HEMAN)

HSP 1 Score: 65.5 bits (158), Expect = 1.130e-9
Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 0
Query:  102 DRVLILDVDGTLYGQA-SGVEQQIVDGIHEFFREELGLSPAECDEVHHRHGSTIWGLQ 158
            + V+++DVD TLY ++ +G+E+QIV GIH F  +   L+P  CDE+H  HGSTI GL+
Sbjct:   79 NEVVVIDVDNTLYDESETGIEKQIVAGIHSFCAKHFNLTPETCDELHRTHGSTIQGLK 136          
BLAST of mRNA_S-dermatodea_contig10945.624.1 vs. uniprot
Match: A0A1Z5JW93_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JW93_FISSO)

HSP 1 Score: 65.1 bits (157), Expect = 4.170e-9
Identity = 28/58 (48.28%), Postives = 45/58 (77.59%), Query Frame = 0
Query:  103 RVLILDVDGTLYGQAS-GVEQQIVDGIHEFFREELGLSPAECDEVHHRHGSTIWGLQQ 159
            ++L++DVD TLY + + G+EQQIV  IH F +E LG++ ++ DE+H ++GST+ GL+Q
Sbjct:   32 KILLIDVDNTLYNERNHGIEQQIVQNIHRFCQERLGMTVSQADELHAKYGSTVEGLRQ 89          
BLAST of mRNA_S-dermatodea_contig10945.624.1 vs. uniprot
Match: D7FVW7_ECTSI (ADH_zinc_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW7_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 7.300e-5
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 0
Query:   69 LRGGGS-------ADAGVDRVTSSSCSGVGQEPA----AIAHPYDRVLILDVDGTLYGQASGVEQQIV 125
            +RGGG+       A AG+  V   SCS  G        A A P +RVLILDVDGTLYGQ+SGVEQQ++
Sbjct:   52 IRGGGTSRAQESTATAGIG-VVEDSCSPGGNADLWSREAGAEPSERVLILDVDGTLYGQSSGVEQQVL 118          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10945.624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L623_9PHAE4.130e-3357.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YST1_9STRA2.080e-1855.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0TWR3_HEMAN1.130e-950.00Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A1Z5JW93_FISSO4.170e-948.28Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
D7FVW7_ECTSI7.300e-551.47ADH_zinc_N domain-containing protein n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..174
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.875
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10945contigS-dermatodea_contig10945:1052..7067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10945.624.1mRNA_S-dermatodea_contig10945.624.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10945 1030..7067 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10945.624.1 ID=prot_S-dermatodea_contig10945.624.1|Name=mRNA_S-dermatodea_contig10945.624.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=174bp
MVVRRMLLHVLVLQLLLLVRVGCVTLDAVVGPTTTLPWRIGQRAGLPSAH
DNRSIVSLCRRKRPPQEALRGGGSADAGVDRVTSSSCSGVGQEPAAIAHP
YDRVLILDVDGTLYGQASGVEQQIVDGIHEFFREELGLSPAECDEVHHRH
GSTIWGLQQEGRVTAGQVERYYEK
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