prot_S-dermatodea_contig10913.615.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10913.615.1
Unique Nameprot_S-dermatodea_contig10913.615.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length91
Homology
BLAST of mRNA_S-dermatodea_contig10913.615.1 vs. uniprot
Match: D7FIW7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW7_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 4.940e-32
Identity = 64/85 (75.29%), Postives = 75/85 (88.24%), Query Frame = 0
Query:    1 MHKELQMVPWTLTANYLKHRGMGASQGTSLLMLTGVGDPSGCGEGFSYLTRQAEQAKASASLTTSEKIVADRSVKKVTGTSGDLR 85
            M+KELQMVPWTLT NYLK  G+ +S   SLLML+G+GDPSGCGEGFS+L R AEQAKA+ASLTTS+KIVA+RSV+KVTGT+ DLR
Sbjct: 1026 MYKELQMVPWTLTINYLKRHGITSSPAASLLMLSGMGDPSGCGEGFSFLPRPAEQAKATASLTTSQKIVAERSVQKVTGTNSDLR 1110          
BLAST of mRNA_S-dermatodea_contig10913.615.1 vs. uniprot
Match: A0A6H5JVI6_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI6_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.690e-31
Identity = 63/85 (74.12%), Postives = 74/85 (87.06%), Query Frame = 0
Query:    1 MHKELQMVPWTLTANYLKHRGMGASQGTSLLMLTGVGDPSGCGEGFSYLTRQAEQAKASASLTTSEKIVADRSVKKVTGTSGDLR 85
            M+KELQMVPWTLT NYLK  G+ +S   SLLML+G+GDPSGCGEGFS+L R AEQAKA+ SLTTS+KIVA+RSV+KVTGT+ DLR
Sbjct:  240 MYKELQMVPWTLTINYLKRHGITSSPAASLLMLSGMGDPSGCGEGFSFLPRPAEQAKATTSLTTSQKIVAERSVQKVTGTNSDLR 324          
BLAST of mRNA_S-dermatodea_contig10913.615.1 vs. uniprot
Match: A0A7S2VAC4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VAC4_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.220e-9
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    1 MHKELQMVPWTLTANYLK-HRGMGASQGTSLLMLTGVGDPSGCGEGFSYLTRQAEQAKASASLTTSEKIVADRSVKKVTGTSGDLR 85
            +H+EL + PW LT  +L  H+    ++GT ++ LTG+GDPSG GEGFS+L R+ + +K S S+  +     +  VKK+TGT+ DLR
Sbjct:    8 IHQELLLAPWHLTGEFLDVHK---KAEGTGMMKLTGLGDPSGTGEGFSFL-REVD-SKPSKSVGNA---AINAQVKKITGTNDDLR 85          
BLAST of mRNA_S-dermatodea_contig10913.615.1 vs. uniprot
Match: A0A1Z5JFQ5_FISSO (Transcription initiation factor TFIID subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFQ5_FISSO)

HSP 1 Score: 61.6 bits (148), Expect = 4.700e-9
Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    3 KELQMVPWTLTANYLKHRGMGASQGTSLLMLTGVGDPSGCGEGFSYLTRQAEQAKASASLTTSEKIVADRSVKKVTGTSGDLR 85
            +ELQ+ PW LT  ++     G  +GT ++ LTG+GDPSG GEGFS+L R+A+ +K S S+  +     +  +KK+TGT  DLR
Sbjct:  806 EELQLAPWHLTVEFIDVHKKG--EGTGMMKLTGLGDPSGMGEGFSFL-READ-SKPSKSVGNA---ALNSQIKKITGTENDLR 881          
BLAST of mRNA_S-dermatodea_contig10913.615.1 vs. uniprot
Match: A0A0P1AXT8_PLAHL (Protein serine threonine kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AXT8_PLAHL)

HSP 1 Score: 60.5 bits (145), Expect = 1.200e-8
Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 0
Query:    1 MHKELQMVPWTLTANYLKHRGMGASQGTSLLMLTGVGDPSGCGEGFSYLTRQAEQAKAS-----ASLTTSEKIVAD-----RSVKKVTGTSGDLR 85
            ++++LQ+ PW LT NY++    G  +G+ +L L G+GDP+G GEGFS++     +AK       A+ TT  KI A+     ++V  VTGT+ DLR
Sbjct:  852 INEQLQLTPWNLTNNYVECHLQG--KGSGMLQLGGIGDPTGRGEGFSFVRVPQSRAKKKDGEEDAAPTTESKISAETAAVQKAVAAVTGTTADLR 944          
BLAST of mRNA_S-dermatodea_contig10913.615.1 vs. uniprot
Match: H3GM70_PHYRM (Bromo domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GM70_PHYRM)

HSP 1 Score: 59.7 bits (143), Expect = 2.250e-8
Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 0
Query:    1 MHKELQMVPWTLTANYLKHRGMGASQGTSLLMLTGVGDPSGCGEGFSYLTRQAEQAK----------ASASLTTSEKIVADRSVKKVTGTSGDLR 85
            ++++LQ+ PW LT NY++    G  +G+ +L L G+GDP+G GEGFS++     +AK           + S T++E     ++V  VTGT+ DLR
Sbjct:  862 VNEQLQLTPWNLTNNYVECHLQG--KGSGMLQLGGIGDPTGRGEGFSFVRVPQSRAKKKDGEEDAAPTAESKTSAETTAMQKAVAAVTGTTADLR 954          
BLAST of mRNA_S-dermatodea_contig10913.615.1 vs. uniprot
Match: A0A662X758_9STRA (Bromo domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X758_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.070e-8
Identity = 35/92 (38.04%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    3 KELQMVPWTLTANYLKHRGMGASQGTSLLMLTGVGDPSGCGEGFSYLTRQAEQAK---------ASASLTTSEKIVADRSVKKVTGTSGDLR 85
            ++LQ+ PW LT NY++    G  +G+ +L L G+GDP+G GEGFS++     +AK         A+ S  ++E     ++V  VTGT+ DLR
Sbjct:  848 EQLQLTPWNLTNNYVECHLQG--KGSGMLQLGGIGDPTGRGEGFSFVRVPQSRAKKKDGEEEAPAAESKLSAESAAVQKAVAAVTGTTADLR 937          
BLAST of mRNA_S-dermatodea_contig10913.615.1 vs. uniprot
Match: A0A067DXS5_CITSI (DUF3591 domain-containing protein (Fragment) n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067DXS5_CITSI)

HSP 1 Score: 58.2 bits (139), Expect = 3.470e-8
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 0
Query:    1 MHKELQMVPWTLTANYLKHRGMGASQGTSLLMLTGVGDPSGCGEGFSYLTRQAEQAKASASLTTSEKIVADRSVKKVTGTSGDLR 85
            + +ELQ+ PW L++N++        +    L +TGVGDPSG G GFSY+ R A +A  S+++   +K+ A+R    VTGT  DLR
Sbjct:  125 IERELQITPWNLSSNFVACTNQDR-ENIERLEITGVGDPSGRGLGFSYV-RAAPKASVSSAMV-KKKVAANRGGSNVTGTDADLR 206          
BLAST of mRNA_S-dermatodea_contig10913.615.1 vs. uniprot
Match: B7FQ37_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQ37_PHATC)

HSP 1 Score: 58.9 bits (141), Expect = 4.180e-8
Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    1 MHKELQMVPWTLTANYLKHRGMGASQGTSLLMLTGVGDPSGCGEGFSYLTRQAEQAKASASLTTSEKIVADRSVKKVTGTSGDLR 85
            ++++LQ+ PW LT  ++     G   GT ++ LTG+GDPSG GEGFS++ R+A+ +K S S+  +        VKK+TGT  DLR
Sbjct:  796 IYEQLQLAPWHLTGEFIDVHKKG--DGTGMMKLTGLGDPSGQGEGFSFI-READ-SKPSKSVGNA---ALSAEVKKITGTEDDLR 873          
BLAST of mRNA_S-dermatodea_contig10913.615.1 vs. uniprot
Match: UPI001CB8FE9B (transcription initiation factor TFIID subunit 1 isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8FE9B)

HSP 1 Score: 58.9 bits (141), Expect = 4.210e-8
Identity = 37/85 (43.53%), Postives = 50/85 (58.82%), Query Frame = 0
Query:    1 MHKELQMVPWTLTANYLKHRGMGASQGTSLLMLTGVGDPSGCGEGFSYLTRQAEQAKASASLTTSEKIVADRSVKKVTGTSGDLR 85
            + +ELQ+ PWTL+ N++             L +TGVGDPSG G GFSY+ R A +A  S + T  +K+   R V +VTGT  DLR
Sbjct: 1006 IERELQITPWTLSGNFVACTNQDKGN-IEKLEITGVGDPSGRGLGFSYV-RTASKAPVS-NATAKKKVPVTRGVLQVTGTDADLR 1087          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10913.615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIW7_ECTSI4.940e-3275.29Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JVI6_9PHAE1.690e-3174.12Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2VAC4_9STRA2.220e-944.19Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A1Z5JFQ5_FISSO4.700e-944.58Transcription initiation factor TFIID subunit 1 n=... [more]
A0A0P1AXT8_PLAHL1.200e-840.00Protein serine threonine kinase n=1 Tax=Plasmopara... [more]
H3GM70_PHYRM2.250e-836.84Bromo domain-containing protein n=1 Tax=Phytophtho... [more]
A0A662X758_9STRA3.070e-838.04Bromo domain-containing protein n=1 Tax=Nothophyto... [more]
A0A067DXS5_CITSI3.470e-841.18DUF3591 domain-containing protein (Fragment) n=1 T... [more]
B7FQ37_PHATC4.180e-842.35Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
UPI001CB8FE9B4.210e-843.53transcription initiation factor TFIID subunit 1 is... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022591Transcription initiation factor TFIID subunit 1, domain of unknown functionPFAMPF12157DUF3591coord: 2..84
e-value: 1.8E-12
score: 46.7
IPR040240Transcription initiation factor TFIID subunit 1PANTHERPTHR13900TRANSCRIPTION INITIATION FACTOR TFIIDcoord: 2..85
NoneNo IPR availablePANTHERPTHR13900:SF0TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1coord: 2..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10913contigS-dermatodea_contig10913:803..1436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10913.615.1mRNA_S-dermatodea_contig10913.615.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10913 803..1466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10913.615.1 ID=prot_S-dermatodea_contig10913.615.1|Name=mRNA_S-dermatodea_contig10913.615.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=91bp
MHKELQMVPWTLTANYLKHRGMGASQGTSLLMLTGVGDPSGCGEGFSYLT
RQAEQAKASASLTTSEKIVADRSVKKVTGTSGDLRWAVWK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022591TFIID_sub1_DUF3591
IPR040240TAF1