prot_S-dermatodea_contig10877.583.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10877.583.1
Unique Nameprot_S-dermatodea_contig10877.583.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length124
Homology
BLAST of mRNA_S-dermatodea_contig10877.583.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 1.060e-36
Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 0
Query:    2 VREVALSDDAGPFAVPVDVPDYASFIPVPMDLGLILRRLEKEYYCCVDALEFDCNLIYANCTKYNRPGSYIVKLASSISDRLVQAIKAVSDGG 94
            VREVA S DA  FA PVDV DY + +PVPMDLGLILRRLEK+YYC V+ALEFDCNL+Y NCTKYN PGS IVKLA ++SD+LVQAIKA+S+ G
Sbjct: 1527 VREVAESPDAALFAEPVDVADYHTIVPVPMDLGLILRRLEKDYYCSVEALEFDCNLVYDNCTKYNEPGSDIVKLAFTVSDQLVQAIKAISEPG 1619          
BLAST of mRNA_S-dermatodea_contig10877.583.1 vs. uniprot
Match: D8LEP1_ECTSI (WD-repeat protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP1_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 1.420e-36
Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 0
Query:    2 VREVALSDDAGPFAVPVDVPDYASFIPVPMDLGLILRRLEKEYYCCVDALEFDCNLIYANCTKYNRPGSYIVKLASSISDRLVQAIKAVSDGG 94
            VREVA S DA  FA PVDV DY + +PVPMDLGLILRRLEK+YYC V+ALEFDCNL+Y NCTKYN PGS IVKLA ++SD+LVQAIKA+S+ G
Sbjct: 1568 VREVAESPDAALFAEPVDVVDYHTIVPVPMDLGLILRRLEKDYYCSVEALEFDCNLVYDNCTKYNEPGSDIVKLAFTVSDQLVQAIKAISEPG 1660          
BLAST of mRNA_S-dermatodea_contig10877.583.1 vs. uniprot
Match: A0A7S0DD85_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DD85_9EUKA)

HSP 1 Score: 68.2 bits (165), Expect = 2.720e-11
Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   13 PFAVPVDV---PDYASFIPVPMDLGLILRRLEKEYYCCVDALEFDCNLIYANCTKYNRPGSYIVKLASSISDRLVQA 86
            PF  PVD+   P Y   + VP+DL LI  R+E +YY  +DAL FD   I ANC ++N+P S++VK   ++  +  +A
Sbjct:  160 PFRFPVDLEHFPHYTGLVNVPIDLSLIRARIENDYYRQIDALTFDIKHIQANCVRFNKPDSFVVKAVENMVKKYEEA 236          
BLAST of mRNA_S-dermatodea_contig10877.583.1 vs. uniprot
Match: UPI00148D340F (bromodomain testis-specific protein isoform X1 n=8 Tax=Pleuronectoidei TaxID=30942 RepID=UPI00148D340F)

HSP 1 Score: 67.8 bits (164), Expect = 1.060e-10
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 0
Query:   13 PFAVPVD-----VPDYASFIPVPMDLGLILRRLEKEYYCCVDALEFDCNLIYANCTKYNRPGSYIVKLASSISDRLVQAI 87
            PF  PVD     +PDY + I  PMDLG I++RL+K+YYC       D N ++ NC  YNRPG  IV +A ++    +Q +
Sbjct:  129 PFRQPVDAVALRLPDYYTIIKNPMDLGTIMKRLQKKYYCEAHECIKDFNAMFTNCYMYNRPGDDIVFMAQTLEKLFLQKL 208          
BLAST of mRNA_S-dermatodea_contig10877.583.1 vs. uniprot
Match: A0A835ZAL2_9STRA (Bromodomain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 5.430e-10
Identity = 34/78 (43.59%), Postives = 44/78 (56.41%), Query Frame = 0
Query:   11 AGPFAVPVD---VPDYASFIPVPMDLGLILRRLEKEYYCCVDALEFDCNLIYANCTKYNRPGSYIVKLASSISDRLVQ 85
            A  FA PVD   V  Y + + +PMDL LILRRLE  YY    AL  DC+LI  NC K+N   S I + +  ++  L +
Sbjct:   17 AASFAAPVDLAAVYGYGATVALPMDLALILRRLEGNYYRGARALAHDCHLIIVNCLKFNLEDSGIARQSQRLASALAE 94          
BLAST of mRNA_S-dermatodea_contig10877.583.1 vs. uniprot
Match: A0A7S1HYR8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HYR8_9EUGL)

HSP 1 Score: 61.6 bits (148), Expect = 1.400e-8
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 0
Query:    2 VREVALSDDAGPFAVPVDV-----PDYASFIPVPMDLGLILRRLEKEYYCCVDALEFDCNLIYANCTKYNRPGSYIVKLASSISDRLVQAI 87
            +R+V  S+DA  F  PVDV     PDYA+ I  PMDLG +  RL   YY  ++A+  D +LI+ANC +YN     + K A ++++   Q +
Sbjct:  321 LRKVMDSEDATDFLNPVDVLRLDLPDYATIITHPMDLGTVHHRLGSGYYPNLEAVLQDVDLIWANCYRYNGTEHAVGKKAKNLAELFGQEL 411          
BLAST of mRNA_S-dermatodea_contig10877.583.1 vs. uniprot
Match: UPI001C933ED4 (homeotic protein female sterile-like n=1 Tax=Drosophila grimshawi TaxID=7222 RepID=UPI001C933ED4)

HSP 1 Score: 59.7 bits (143), Expect = 3.750e-8
Identity = 32/83 (38.55%), Postives = 43/83 (51.81%), Query Frame = 0
Query:   11 AGPFAVPVD-----VPDYASFIPVPMDLGLILRRLEKEYYCCVDALEFDCNLIYANCTKYNRPGSYIVKLASSISDRLVQAIK 88
            A PF  PV+     +PDY   I  PMDL  I +RL   YY        D NLI+ NC+ YN+P   ++ +A  +    +QAIK
Sbjct:   46 AYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANNYYWSATEAAADINLIFTNCSLYNKPTEDVIIMAKVLESVFLQAIK 128          
BLAST of mRNA_S-dermatodea_contig10877.583.1 vs. uniprot
Match: B4JZ41_DROGR (GH22416 n=1 Tax=Drosophila grimshawi TaxID=7222 RepID=B4JZ41_DROGR)

HSP 1 Score: 59.7 bits (143), Expect = 4.940e-8
Identity = 32/83 (38.55%), Postives = 43/83 (51.81%), Query Frame = 0
Query:   11 AGPFAVPVD-----VPDYASFIPVPMDLGLILRRLEKEYYCCVDALEFDCNLIYANCTKYNRPGSYIVKLASSISDRLVQAIK 88
            A PF  PV+     +PDY   I  PMDL  I +RL   YY        D NLI+ NC+ YN+P   ++ +A  +    +QAIK
Sbjct:   46 AYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANNYYWSATEAAADINLIFTNCSLYNKPTEDVIIMAKVLESVFLQAIK 128          
BLAST of mRNA_S-dermatodea_contig10877.583.1 vs. uniprot
Match: B4JZ39_DROGR (GH22415 n=5 Tax=Drosophila grimshawi TaxID=7222 RepID=B4JZ39_DROGR)

HSP 1 Score: 59.7 bits (143), Expect = 5.320e-8
Identity = 32/83 (38.55%), Postives = 43/83 (51.81%), Query Frame = 0
Query:   11 AGPFAVPVD-----VPDYASFIPVPMDLGLILRRLEKEYYCCVDALEFDCNLIYANCTKYNRPGSYIVKLASSISDRLVQAIK 88
            A PF  PV+     +PDY   I  PMDL  I +RL   YY        D NLI+ NC+ YN+P   ++ +A  +    +QAIK
Sbjct:   46 AYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANSYYWSATEAAADINLIFTNCSLYNKPTEDVIIMAKVLESVFLQAIK 128          
BLAST of mRNA_S-dermatodea_contig10877.583.1 vs. uniprot
Match: A0A1E3QNZ5_9ASCO (Uncharacterized protein (Fragment) n=1 Tax=Babjeviella inositovora NRRL Y-12698 TaxID=984486 RepID=A0A1E3QNZ5_9ASCO)

HSP 1 Score: 59.7 bits (143), Expect = 6.620e-8
Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    2 VREVALSDDAGPFAVPVDV-----PDYASFIPVPMDLGLILRRLEKEYYCCVDALEFDCNLIYANCTKYNRPGSYIVKLASSI 79
            ++ +    DAGPF +PVD+     P Y ++IP PMDL  + +++    Y   + L  D NL+ ANCTK+N   S I ++A +I
Sbjct:   33 IKAIRRLKDAGPFLLPVDIVKLGIPFYYNYIPHPMDLSTMEKKITANAYEEPEQLALDFNLMVANCTKFNGSDSGIAQMARNI 115          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10877.583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTA2_9PHAE1.060e-3674.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEP1_ECTSI1.420e-3674.19WD-repeat protein, putative n=1 Tax=Ectocarpus sil... [more]
A0A7S0DD85_9EUKA2.720e-1141.56Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
UPI00148D340F1.060e-1042.50bromodomain testis-specific protein isoform X1 n=8... [more]
A0A835ZAL2_9STRA5.430e-1043.59Bromodomain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S1HYR8_9EUGL1.400e-839.56Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
UPI001C933ED43.750e-838.55homeotic protein female sterile-like n=1 Tax=Droso... [more]
B4JZ41_DROGR4.940e-838.55GH22416 n=1 Tax=Drosophila grimshawi TaxID=7222 Re... [more]
B4JZ39_DROGR5.320e-838.55GH22415 n=5 Tax=Drosophila grimshawi TaxID=7222 Re... [more]
A0A1E3QNZ5_9ASCO6.620e-837.35Uncharacterized protein (Fragment) n=1 Tax=Babjevi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 36..54
score: 27.8
coord: 54..73
score: 37.5
coord: 20..36
score: 47.44
IPR001487BromodomainSMARTSM00297bromo_6coord: 1..92
e-value: 1.9E-5
score: 34.1
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 8..76
e-value: 4.5E-14
score: 52.3
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 6..73
score: 12.471
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..96
e-value: 1.1E-21
score: 79.0
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 8..90
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 9..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10877contigS-dermatodea_contig10877:2500..4743 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10877.583.1mRNA_S-dermatodea_contig10877.583.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10877 2471..4743 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10877.583.1 ID=prot_S-dermatodea_contig10877.583.1|Name=mRNA_S-dermatodea_contig10877.583.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=124bp
MVREVALSDDAGPFAVPVDVPDYASFIPVPMDLGLILRRLEKEYYCCVDA
LEFDCNLIYANCTKYNRPGSYIVKLASSISDRLVQAIKAVSDGGASSTGD
GGAGSGAGTSGTGAGAAGAGAGAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf