prot_S-dermatodea_contig10834.565.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10834.565.1
Unique Nameprot_S-dermatodea_contig10834.565.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length71
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig10834.565.1 vs. uniprot
Match: D7FZ73_ECTSI (Sno, strawberry notch homolog 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ73_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 9.690e-25
Identity = 49/69 (71.01%), Postives = 60/69 (86.96%), Query Frame = 0 
Query:    1 MELVAMQLKAEGKLLSRTLSFEGCEFSLLPLVNTKWQIDLYNASTMVWQLFWQVIMEAAGDGSLYTLVD 69
            MELVAMQLKAEG LLSR+LSF+GCEFSL+PLVN+K+QID YNA+   WQL WQV+ +A G+ +LYTLV+
Sbjct:  326 MELVAMQLKAEGMLLSRSLSFQGCEFSLVPLVNSKFQIDSYNAAVKTWQLLWQVLNDAVGEDTLYTLVE 394
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10834.565.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZ73_ECTSI9.690e-2571.01Sno, strawberry notch homolog 1 n=1 Tax=Ectocarpus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039187Strawberry notch, AAA domainPFAMPF13872AAA_34coord: 1..43
e-value: 2.1E-10
score: 40.0
IPR026741Protein strawberry notchPANTHERPTHR12706STRAWBERRY NOTCH-RELATEDcoord: 1..59
NoneNo IPR availablePANTHERPTHR12706:SF13PROTEIN STRAWBERRY NOTCHcoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10834contigS-dermatodea_contig10834:1557..5768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10834.565.1mRNA_S-dermatodea_contig10834.565.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10834 1557..5783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10834.565.1 ID=prot_S-dermatodea_contig10834.565.1|Name=mRNA_S-dermatodea_contig10834.565.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=71bp
MELVAMQLKAEGKLLSRTLSFEGCEFSLLPLVNTKWQIDLYNASTMVWQL
FWQVIMEAAGDGSLYTLVDDG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039187SNO_AAA
IPR026741SNO