prot_S-dermatodea_contig10825.559.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10825.559.1
Unique Nameprot_S-dermatodea_contig10825.559.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length598
Homology
BLAST of mRNA_S-dermatodea_contig10825.559.1 vs. uniprot
Match: D7FK51_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK51_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 2.220e-68
Identity = 260/578 (44.98%), Postives = 296/578 (51.21%), Query Frame = 0
Query:   17 ALRRNKSIRLLELCFNRITAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALPTLGLQTLELGFNNVATAGVAALMQATVNSPVFTSLSLSGNALDAEGAKAIQVALAQPRCALQRLSLDHTSLGRASEVFIANGVLSNRRLTLASLTGFPLGAAFARLGMPPQVASFSNEQALEQVRLYWANHLNLAGGARAGXXXXXXXXXXXXXXXXXEDSGNGRRSGAGNPDARPARPQHAPPPPPHARGAVGARVPNNALLPPQRQEHGHVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXSESRRARKGSAPPAVLKSCRIVADSSSGGHERVPVHPTGARGGXXXXXXXXXXXXXXXAVIGDKLHRPLVQDLHEIAQLPFSAAELWSLHQYYFSPPVE------PRSPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGVGWLDGFCSASNGRAQEDGDLGGSVVAXXXXXXXXXXXXXPVRDDGVGAGARRCRRSXXLGEXXDDEVDSPRPPSKRYRNSS-------------TNMRIACFPLIQARIRALKSKPDERGVLTILRQLKFLE 575
            A+ RN SIRLLELCFNRITAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ALPTLGL+TL++GF++V TAGVAALMQAT NSP FTSLSLSGNALDAE AKAIQ ALAQPRC+L+ L LDHTSLGRASE FIANGVLSNR L L +LTGF LG++FARLGMPPQVA+FSN+QALEQ +   AN                                                      PP    GA+GA                                                         A                G   R      G RGG  XXXXXXXXXXXXX  + + L   LV+ LH+IAQLPFSAAELWSLHQ+YFSPP++       RS  +                       XXXXXXX  G G+ +G  +A +   +     G +                   D  VGAGARR    XX   XX                               T  RIACFP ++AR+RALKSKPD+RG+LT+LRQLK L+
Sbjct:  416 AVARNTSIRLLELCFNRITAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIALPTLGLETLDVGFSHVGTAGVAALMQATANSPSFTSLSLSGNALDAEAAKAIQAALAQPRCSLRCLYLDHTSLGRASEGFIANGVLSNRSLALVTLTGFRLGSSFARLGMPPQVANFSNDQALEQQK---AN------------------------------------------------------PPGVREGALGA---------------------------------------------------------AXXXXXXXXXXXXXXXPGVPRRAVSEDAGCRGGVGXXXXXXXXXXXXXXAVPEALRASLVEALHQIAQLPFSAAELWSLHQHYFSPPLDHHPSPSSRSSPTSAASTPSPSTCPSKAGPGRTWAAXXXXXXXXXGGGFPNGLATARDTEGR-----GSNPAGVLGPPGGGSRGCSGDEDAEVGAGARRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKTRIACFPSVEARVRALKSKPDDRGILTVLRQLKHLQ 874          
BLAST of mRNA_S-dermatodea_contig10825.559.1 vs. uniprot
Match: A0A6H5KVK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK7_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 1.160e-54
Identity = 219/558 (39.25%), Postives = 264/558 (47.31%), Query Frame = 0
Query:   73 ALPTLGLQTLELGFNNVATAGVAALMQATVNSPVFTSLSLSGNALDAEGAKAIQVALAQPRCALQRLSLDHTSLGRASEVFIANGVLSNRRLTLASLTGFPLGAAFARLGMPPQVASFSNEQALEQVRLYWANHLNLAGGARAGXXXXXXXXXXXXXXXXXE-----------------------DSGNGRRSGAGNPDARPARPQHAPPPPPHARGAVGARVPNNALLPPQRQE--HGHVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXSESRRARKGSAPPAVLKSCRIVADSSSGGHERVPVHP----------TGARGGXXXXXXXXXXXXXXXAVIGDKLHRPLVQDLHEIAQLPFSAAELWSLHQYYFSPPVEPR-SPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGC------GVGWLDGFCSASNGRAQEDGDLGGSVVAXXXXXXXXXXXXXPVRDDGVGAGARRCRRSXXLGEXXDDEVDSPRPPSKRYRNSSTNM-------------RIACFPLIQARIRALKSKPDERGVLTILRQLKFLE 575
            ALPTLGL+TL++GF++V TAGVAALMQA                           ALAQPRC+L+ L LDHTSLGRASE FIANGVLSNR L L +LTGF LG++FARLGMPPQVA+FSN+QALEQVRLYWANH+N A      XXXXXXXXXXXXXXXXX                        D G+    GAG                   +   G  + NNA  P +RQ+   G  P                             +    +  + P     +    A    G       HP           G +GG               A + + L   LV+ LH+IAQLPFSAAELWSLHQ+YFSPP++   SP+SXXXXXXXXXXXXXXX             XX        G G++ G   A +   ++    G                     D  VGAG RR RRS  +G+  D E                               RIACFP ++AR+RALKSKPD+RG+LT+LRQLK L+
Sbjct:  520 ALPTLGLETLDVGFSHVGTAGVAALMQA---------------------------ALAQPRCSLRCLCLDHTSLGRASEGFIANGVLSNRSLALVTLTGFRLGSSFARLGMPPQVANFSNDQALEQVRLYWANHVNQAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRDPGDGGSRIGDGAG-------------------KDFTGGAL-NNAHQPQRRQQCMGGGSPTAAVVTEKAIPPHPPSEYRPHHLSRYHQHQGDHQQNANPPGVREAALGAAATGHHGXXXGGRHHPGVSGRAVSADAGCQGGVGSSGGDGTERAA--AAVPEALRASLVEALHQIAQLPFSAAELWSLHQHYFSPPLDHHPSPSSXXXXXXXXXXXXXXXCPSNAGPGRTWAAXXXXXXXXXXGGGFVHGSAIARDTEGRDSNPAG-----VPGPPGGGSRGCSGDEDAEVGAGGRRSRRSASMGQEQDLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRIACFPSVEARVRALKSKPDDRGILTVLRQLKHLQ 1023          
BLAST of mRNA_S-dermatodea_contig10825.559.1 vs. uniprot
Match: A0A7S2KCJ2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KCJ2_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.620e-20
Identity = 64/205 (31.22%), Postives = 107/205 (52.20%), Query Frame = 0
Query:    1 MSDNEIGDEGLEGLAHALRRNKSIRL--LELCFNRITAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALPTLGLQTLELGFNNVATAGVAALMQATVNSPVFTSLSLSGNALDAEGAKAIQVALAQPRCALQRLSLDHTSLGRASEVFIANGVLSNRRLTLASLTGFPLGAAFARLGMPPQVASFSNEQALEQVRLYW 203
            +SDN + D+ L   + ++ RN+ + L  L L FN++T                                      L ++ L+ L++GFN +   G+ ALM++   +    +L+LSGN LD   +KA+  ALA  +  +Q+L +DH SL  A++  IA G++SN +L L  ++GFPLGA    LG+P  + +++NEQ L+ +R+ W
Sbjct:  291 LSDNGLNDQDLSLFSQSISRNRQLPLETLRLSFNKLTCVGVETLMNAIWGSKTLREIKLDNNQIRDRGAQLAAVVLTSVELEVLDMGFNRLTIVGIKALMKSLAENCSLLTLTLSGNVLDTNASKAVSYALAYNKT-IQKLYVDHCSLSYAAQRHIAAGIVSNSKLALRVMSGFPLGAISVTLGLPGAMENWTNEQVLKFIRVMW 494          
BLAST of mRNA_S-dermatodea_contig10825.559.1 vs. uniprot
Match: A0A7S1YYC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YYC7_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 5.310e-19
Identity = 51/125 (40.80%), Postives = 81/125 (64.80%), Query Frame = 0
Query:   79 LQTLELGFNNVATAGVAALMQATVNSPVFTSLSLSGNALDAEGAKAIQVALAQPRCALQRLSLDHTSLGRASEVFIANGVLSNRRLTLASLTGFPLGAAFARLGMPPQVASFSNEQALEQVRLYW 203
            L+ ++LGFN++ + G+  LM+    S     LS+SGN +D+E +KA+  ALA  R +L+ + LDH  +    +  I  G++SN  ++L +LTGFPLGAA A LG+PP + +++NEQ L+ + L W
Sbjct:   29 LEKIDLGFNSIGSGGMKTLMKYVSESTCINWLSVSGNPIDSEASKAVAYALAYNR-SLKSMFLDHCFIAHEGQRHITAGIVSNSGISLRNLTGFPLGAAAATLGLPPALENWTNEQLLKFIHLMW 152          
BLAST of mRNA_S-dermatodea_contig10825.559.1 vs. uniprot
Match: A0A7S4EEC4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEC4_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.380e-13
Identity = 60/204 (29.41%), Postives = 95/204 (46.57%), Query Frame = 0
Query:    4 NEIGDEGLEGLAHALRRNKSIRL--LELCFNRITAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALPTLGLQTLELGFNNVATAGVAALMQATVNSPVFTSLSLSGNALDAEGAKAIQVALAQPRCALQRLSLDHTSLGRASEVFIANGVLSNRRLTLASLTGFPLGAAFARLGMPPQVASFSNEQALEQVRLYWAN 205
            N + D  L  L+ +L +NK+I L  L L FN+IT                                      L ++ L+ L++ FN ++T GV A+M++   +     L+L G  +D   +KA+  ALA  + +LQR ++D  S+G + +  I  G++SNR   L  LTGFPL      LG+P     + N++ L  VR  W +
Sbjct:  429 NNLNDSDLALLSQSLTQNKNIPLKSLILSFNKITCVGIECLMNAVWGSSTLKEVKLDSNLMEDRGAQLCSVVLSSIRLELLDVSFNRISTIGVKAIMKSLSENDSLKRLALCGVPMDQNASKAVSYALAYNQ-SLQRFNIDSCSVGYSGQRHIVAGIVSNRYTKLHRLTGFPLAPIIMTLGLPQLPEEWGNDRVLSFVRFMWTH 631          
BLAST of mRNA_S-dermatodea_contig10825.559.1 vs. uniprot
Match: A0A1Z5K171_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K171_FISSO)

HSP 1 Score: 85.1 bits (209), Expect = 1.680e-13
Identity = 64/213 (30.05%), Postives = 104/213 (48.83%), Query Frame = 0
Query:    6 IGDEGLEGLAHALRRNKSIRLLELCF--NRITAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALPTLGLQTLELGFN-NVATAGVAALMQATVNSPVFTSLSLSGNALDAEGAKAIQVALAQPRCALQRLSLDHTSLGRASEVFIANGVLSNRRLTLASLTGFPLGAAFARLGMPPQVASFSNEQALEQVRLYWANHLNLAGGARA 215
            +GD  ++ L+ A+ +NKS+ L +L F  N I+                                     AL ++ ++ L+L FN N++T G+ ALM+    +    SL L+G  LD   +KA+  ALA    +LQ L LD+ ++G AS+  I  G++SN+R +L  +TGF +      LG+P    ++SN+Q L  +R  W   L  +G  +A
Sbjct:  333 VGDHEMQLLSQAISQNKSLPLEKLVFSFNEISCQGVESLMNAAWGSKSLRVIRLDNNRIQDRGAQLCAVALTSIQMEVLDLSFNRNISTTGIKALMKNISENNSLRSLGLAGIHLDQNSSKALSYALAY-NMSLQTLYLDNCNVGYASQRHIVAGIVSNQRASLRLVTGFDIAPIAITLGLPRLPETWSNDQVLGFIRYMWQQWLLKSGRGKA 544          
BLAST of mRNA_S-dermatodea_contig10825.559.1 vs. uniprot
Match: B7G2T0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2T0_PHATC)

HSP 1 Score: 83.2 bits (204), Expect = 7.090e-13
Identity = 64/218 (29.36%), Postives = 100/218 (45.87%), Query Frame = 0
Query:    1 MSDNEIGDEGLEGLAHALRRNKSIRLLELC--FNRITAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALPTLGLQTLELGFNNVATAGVAALMQATVNSPVFTSLSLSGNALDAEGAKAIQVALAQPRCALQRLSLDHTSLGRASEVFIANGVLSNRRLTLASLTGFPLGAAFARLGMPPQVASFSNEQALEQVRLYWANHLNLAGGARAG 216
            +S+N + D+ +  ++ AL +NK + L EL   FN+IT                                      L ++ LQ+L++G N V +AG+ ALM+    +    SL L+G  +D   +KA+  ALA    +LQ +  D++  G +++  I  G++SN+   L  LTGFPL      LG+P     +SN+Q L   RL W      AG    G
Sbjct:  396 VSNNNLDDQDILLMSQALTQNKRLPLEELVLSFNQITCQGVENLMNSIWGSTTLKKIKLDNNRLRDRGAQLCAVVLTSIPLQSLDIGCNAVTSAGIKALMKNVSENSSLISLGLAGIHIDQNSSKAVSYALAY-NTSLQAVYFDNSHAGYSAQRHIVAGIVSNQSAPLRLLTGFPLAPIAVTLGVPRLPEVWSNDQVLGFFRLMWRQWAIKAGRGNVG 612          
BLAST of mRNA_S-dermatodea_contig10825.559.1 vs. uniprot
Match: A0A7S4QPC4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QPC4_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.160e-10
Identity = 43/130 (33.08%), Postives = 71/130 (54.62%), Query Frame = 0
Query:   74 LPTLGLQTLELGFNNVATAGVAALMQATVNSPVFTSLSLSGNALDAEGAKAIQVALAQPRCALQRLSLDHTSLGRASEVFIANGVLSNRRLTLASLTGFPLGAAFARLGMPPQVASFSNEQALEQVRLYW 203
            L ++ L+ L+LGFN + T G+ ALM++   +    SL+LSGN                         +D+ S+G A++  I  G++SN +L+L  +TGF +GA    LG+P  + +++NEQ L+ +RL W
Sbjct:   25 LTSVKLEVLDLGFNRITTGGIKALMKSLAENDTLLSLTLSGNPXXXXXXXXXXXXXXXXXX-XXXXXVDNCSVGYAAQRHITAGIVSNSQLSLRVITGFHIGAIAVTLGLPSALENWTNEQVLKFIRLMW 153          
BLAST of mRNA_S-dermatodea_contig10825.559.1 vs. uniprot
Match: A0A7S4RZB5_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RZB5_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.130e-9
Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 0
Query:  118 DAEGAKAIQVALAQPRCALQRLSLDHTSLGRASEVFIANGVLSNRRLTLASLTGFPLGAAFARLGMPPQVASFSNEQALEQVRLYW 203
            D+E +KA+  ALA  R +L+ + LDH  +    +  I  G++SN  ++L +LTGFPLGAA A LG+PP + +++NEQ L+ + L W
Sbjct:  501 DSEASKAVAYALAYNR-SLKSMFLDHCFIAHEGQRHITAGIVSNSGISLRNLTGFPLGAAAATLGLPPALENWTNEQLLKFIHLMW 585          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10825.559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FK51_ECTSI2.220e-6844.98Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KVK7_9PHAE1.160e-5439.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2KCJ2_9STRA2.620e-2031.22Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1YYC7_9STRA5.310e-1940.80Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S4EEC4_9STRA1.380e-1329.41Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1Z5K171_FISSO1.680e-1330.05Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B7G2T0_PHATC7.090e-1329.36Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S4QPC4_9STRA5.160e-1033.08Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RZB5_9STRA5.130e-943.02Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 104..131
e-value: 0.69
score: 18.3
coord: 21..48
e-value: 12.0
score: 9.6
coord: 1..20
e-value: 67.0
score: 4.3
coord: 49..76
e-value: 0.0064
score: 25.7
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 2..145
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 2..174
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..212
e-value: 6.2E-37
score: 128.8
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 49..71
e-value: 4.2E-4
score: 20.1
coord: 1..15
e-value: 0.16
score: 12.1
coord: 21..43
e-value: 1.2
score: 9.4
coord: 106..125
e-value: 0.023
score: 14.7
coord: 79..98
e-value: 0.99
score: 9.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10825contigS-dermatodea_contig10825:2062..7778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10825.559.1mRNA_S-dermatodea_contig10825.559.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10825 2062..7778 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10825.559.1 ID=prot_S-dermatodea_contig10825.559.1|Name=mRNA_S-dermatodea_contig10825.559.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=598bp
MSDNEIGDEGLEGLAHALRRNKSIRLLELCFNRITAAGVEALAKAVWGCT
TLRALRLDNNQVGDRGAQALASALPTLGLQTLELGFNNVATAGVAALMQA
TVNSPVFTSLSLSGNALDAEGAKAIQVALAQPRCALQRLSLDHTSLGRAS
EVFIANGVLSNRRLTLASLTGFPLGAAFARLGMPPQVASFSNEQALEQVR
LYWANHLNLAGGARAGARAAAAGAAATAAPGAAEDSGNGRRSGAGNPDAR
PARPQHAPPPPPHARGAVGARVPNNALLPPQRQEHGHVPPSAGAQGHAGA
AAVTGGAVGGSRRVGGASESRRARKGSAPPAVLKSCRIVADSSSGGHERV
PVHPTGARGGGPGGGGGGGGSGGGGAVIGDKLHRPLVQDLHEIAQLPFSA
AELWSLHQYYFSPPVEPRSPASAASPAPSAPPPVPSATAAAAAATAAAAS
AAGCGVGWLDGFCSASNGRAQEDGDLGGSVVAAGGAGGAGAQQAAPVRDD
GVGAGARRCRRSSSLGEEEDDEVDSPRPPSKRYRNSSTNMRIACFPLIQA
RIRALKSKPDERGVLTILRQLKFLEAGGCDAQPASSHGAAAPATAACA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt