prot_S-dermatodea_contig10812.552.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig10812.552.1
Unique Name	prot_S-dermatodea_contig10812.552.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	465

Homology

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BLAST of mRNA_S-dermatodea_contig10812.552.1 vs. uniprot
Match: D7FW22_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW22_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 1.500e-167
Identity = 270/476 (56.72%), Postives = 323/476 (67.86%), Query Frame = 0

Query:    1 MNATASGVVTLWEFREYFDLPDDGSTTRLFRCFDEDRDNRVGFLEMVVGLWTYCCNCNASLMCLCFDLYDTDHNGQISLTEADFMLKDVFGARWATDEEAKVLHAWLHERDDALLGSPELGVDAWVAFVSENLQIQAPALRTRLILQNKVIGVGFWTFCMRKRATIYRGCRVTMENLISAHVSPAVLEDLAQDRDPSKDHDDSTQFVLRVLRRTGPFPRRRKYRDLGGKKMVLRGLDA----------KFKTLSVRDTYERLTVPAGEDAKWEEPKQPSALQALMASLAAIGERCTPGN---DTAGAIPERYSPAGGLQERAPRANLSSTKNAPPEALALLKARPGIDGAPLGSPAATAXXXXXXXXXXGSTETNQIIANAFFGLKPLP--ASPQGPSLSKGGNR-RNKASRRVAAQTKEVGPPSAPAAGTKAAGGGRAALVRIGKELVLAGDVRRVGTGGAGDGAGGQGKLSARI 460
            MN T +G VTLWEFREYF+LPDD STTRLFRCFDEDRDNR+GFLE+VVG+WTYCCNCNAS++CLCFDL D DHNG+I   E +FM+ DVFG  W  ++EAK +H W HERDDALLG PE+ +DAW AFVS N QIQAPA+ TRL+LQ KV+GVGFWT C+ K  TI+ G   T+E ++SAHVSP +LE+LAQDR    DHDDSTQF LRV+RRTGPFPRRRKYRD+ GKK+  +   A          KF TL+VR+ +ER+TVPAG+DA WE+PK PS LQALMASL AI ER  PG                         +   ++ K APP+ALALLK RPGIDGAPLGSPA              + + +  IANAF+GLKPLP   +P  PS + G  R R K + R A   K V P ++   G++A GGG+  L R GKELV AG+V  VG  G   G GG G LSAR+
Sbjct:    1 MNETGNGTVTLWEFREYFNLPDDRSTTRLFRCFDEDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHNGKIGADEFNFMIVDVFGPEWEKNDEAKAVHTWFHERDDALLGFPEMDMDAWSAFVSANPQIQAPAVHTRLVLQKKVLGVGFWTHCLPKNMTIFLGRTATVEQILSAHVSPNILEELAQDRRLELDHDDSTQFNLRVIRRTGPFPRRRKYRDMAGKKLRAKAAAAVGAVAADNVKKFATLTVREAFERVTVPAGKDATWEDPKPPSTLQALMASLTAIVERAPPGGAXXXXXXXXXXXXXXXXXXXXXXSKKRKNNKKGAPPDALALLKNRPGIDGAPLGSPAVAPSSPTG-----SAVDADPAIANAFYGLKPLPEAVAPVSPSAAAGSGRDRAKTAARTA--KKGVSPAASSPEGSRAVGGGKITLSRTGKELVGAGEVGCVGVPG---GEGGTGTLSARL 466

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig10812.552.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig10812.552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FW22_ECTSI	1.500e-167	56.72	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 1..137 e-value: 5.7E-14 score: 53.9
IPR028846	Recoverin family	PANTHER	PTHR23055	CALCIUM BINDING PROTEINS	coord: 5..92
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 34..46
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 65..92 score: 8.627
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 21..56 score: 6.591
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 5..90

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig10812	contig	S-dermatodea_contig10812:4118..7266 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig10812.552.1	mRNA_S-dermatodea_contig10812.552.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig10812 4118..7278 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig10812.552.1 ID=prot_S-dermatodea_contig10812.552.1|Name=mRNA_S-dermatodea_contig10812.552.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=465bp
MNATASGVVTLWEFREYFDLPDDGSTTRLFRCFDEDRDNRVGFLEMVVGL
WTYCCNCNASLMCLCFDLYDTDHNGQISLTEADFMLKDVFGARWATDEEA
KVLHAWLHERDDALLGSPELGVDAWVAFVSENLQIQAPALRTRLILQNKV
IGVGFWTFCMRKRATIYRGCRVTMENLISAHVSPAVLEDLAQDRDPSKDH
DDSTQFVLRVLRRTGPFPRRRKYRDLGGKKMVLRGLDAKFKTLSVRDTYE
RLTVPAGEDAKWEEPKQPSALQALMASLAAIGERCTPGNDTAGAIPERYS
PAGGLQERAPRANLSSTKNAPPEALALLKARPGIDGAPLGSPAATATAAA
AATATSGSTETNQIIANAFFGLKPLPASPQGPSLSKGGNRRNKASRRVAA
QTKEVGPPSAPAAGTKAAGGGRAALVRIGKELVLAGDVRRVGTGGAGDGA
GGQGKLSARISKAA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR028846	Recoverin
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair