prot_S-dermatodea_contig10800.544.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10800.544.1
Unique Nameprot_S-dermatodea_contig10800.544.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length241
Homology
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BLAST of mRNA_S-dermatodea_contig10800.544.1 vs. uniprot
Match: A0A6H5KJM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM1_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 2.290e-83
Identity = 139/173 (80.35%), Postives = 157/173 (90.75%), Query Frame = 0 
Query:   63 SVHNVKKVVGVQNATRKALEWLQHGDLTLQDLAQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPDALGEDHVTEVYRFSAGRSAAQALDIGGGKSVALGSISKRIKASEAEIAALNERINVLKTEAAKADPQPQLVLDILRDFMKQDKSLDEDPFYSVAYKATCAAAAKAAK 235
            ++ +VKKV GVQNATRKALEWLQ+GD++L +L QSLPKLSKARVEVVMEALRAAGLVTLVRKHAP+A+GEDHVTEVYRFSAGRS A AL+IGGG+ V+LGSISKRIK S+AE+  LNERINVLK EAAKADP+PQ VL+IL+  MKQDKSL+EDPFYSVAYKATC AA KAAK
Sbjct:  101 TIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRPVSLGSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHLMKQDKSLEEDPFYSVAYKATCTAATKAAK 273
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BLAST of mRNA_S-dermatodea_contig10800.544.1 vs. uniprot
Match: D7FN54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN54_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 4.790e-58
Identity = 101/132 (76.52%), Postives = 116/132 (87.88%), Query Frame = 0 
Query:   63 SVHNVKKVVGVQNATRKALEWLQHGDLTLQDLAQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPDALGEDHVTEVYRFSAGRSAAQALDIGGGKSVALGSISKRIKASEAEIAALNERINVLKTEAAKADP 194
            ++ +VKKV GVQNATRKALEWLQ+GD++L +L QSLPKLSKARVEVVMEALRAAGLVTLVRKHAP+A+GEDHVTEVYRFSAGRS A AL+IGGG+ V+LGSISKRIK S+AE+  LNERINVLK    +  P
Sbjct:  102 TIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRPVSLGSISKRIKTSQAELTGLNERINVLKISPVREQP 233
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10800.544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJM1_9PHAE2.290e-8380.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN54_ECTSI4.790e-5876.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 161..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10800contigS-dermatodea_contig10800:1003..4293 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10800.544.1mRNA_S-dermatodea_contig10800.544.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10800 1002..4293 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10800.544.1 ID=prot_S-dermatodea_contig10800.544.1|Name=mRNA_S-dermatodea_contig10800.544.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=241bp
VAPVVPVAAPPPPATTAAIIAAMPEHAVEPRSAPVAADTQPKRPRAKVEV
KGEPLRQTRATASVHNVKKVVGVQNATRKALEWLQHGDLTLQDLAQSLPK
LSKARVEVVMEALRAAGLVTLVRKHAPDALGEDHVTEVYRFSAGRSAAQA
LDIGGGKSVALGSISKRIKASEAEIAALNERINVLKTEAAKADPQPQLVL
DILRDFMKQDKSLDEDPFYSVAYKATCAAAAKAAKVVAIAR
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