prot_S-dermatodea_contig1080.541.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1080.541.1
Unique Nameprot_S-dermatodea_contig1080.541.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length270
Homology
BLAST of mRNA_S-dermatodea_contig1080.541.1 vs. uniprot
Match: D7FIZ3_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ3_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 8.220e-107
Identity = 163/257 (63.42%), Postives = 203/257 (78.99%), Query Frame = 0
Query:   17 PRFLSLGDGNEVLQVALAPGDSILAAERAFCYRGLGLQLEAYPANTGALGRALGWMGMKNDRVVKWTNEGTAPTYVGLAAPLPGKVIPVNLLQSGDLLAKPQMFLCSFTSNQLSASRLRLTPEGPFPQHNIDMRKIQGSGMCYIQAGGAAVQKTLGRSETMVAEIGCVAAISASCKIVAEEHTG-FVREPPYTQGFSVKITGPGTVFIQSTHAGRMSR----DRMAVRAGGAGGDMVKAAAITVGILVLLYALVDVE 268
            PRFLSLG+G+EVLQVAL PGD+ILA E+AF YRGLGLQ E  P  TG +GRALGW+G+KNDRVVK+TNEG +PTY+GL A LPGKVIPV+L +SG LLAKP +FLCS   N +S ++++L  EG   Q +++MRKI G+GMCYI  GGAAVQK LGR E+MV E GCVAA+S +CKIV EE  G  +REPPY QGF VKITGPG+VFIQSTH GR+SR    DR+A + G  GGDM+KAA +T+ I+++++ ++D E
Sbjct:   18 PRFLSLGEGSEVLQVALCPGDAILANEKAFVYRGLGLQQELQP--TGPMGRALGWIGVKNDRVVKFTNEGNSPTYLGLTASLPGKVIPVSLAKSGTLLAKPSVFLCSVVENDISTAKIKLQSEGQSSQQSVEMRKIAGAGMCYIHGGGAAVQKALGRGESMVVEFGCVAAVSDACKIVPEERNGPLIREPPYFQGFQVKITGPGSVFIQSTHTGRLSRASRADRVA-QGGSGGGDMMKAAVLTLVIMIVVFTVLDWE 271          
BLAST of mRNA_S-dermatodea_contig1080.541.1 vs. uniprot
Match: A0A2K1NT36_9BACT (Uncharacterized protein n=1 Tax=Petrotoga sp. 9PWA.NaAc.5.4 TaxID=1434328 RepID=A0A2K1NT36_9BACT)

HSP 1 Score: 95.5 bits (236), Expect = 8.720e-20
Identity = 60/217 (27.65%), Postives = 107/217 (49.31%), Query Frame = 0
Query:   23 GDGNEVLQVALAPGDSILAAERAFCYRGLGLQLEAYPANTGA-----LGRALGWMGMKNDRVVKWTNEGTAPTYVGLAAPLPGKVIPVNLLQ-SGDLLAKPQMFLCSFTSNQLSASRLRLTPEGPFPQHNIDMRKIQGSGMCYIQAGGAAVQKTLGRSETMVAEIGCVAAISASCKIVAEEHTGFVREPPYTQG-FSVKITGPGTVFIQSTHAGRMS 232
            GD  +++++ L PG+ I A   A  Y   G+ ++    NTG      L RA      ++  +  +  EG+   +V   AP PGK++P++L+Q +G  + +   FLC+    ++     +    G F      +++++G GM +I AGG  ++K L   ET+  + GC+     + K   +   GF       +G F  K+TGPGT+++QS    R++
Sbjct:   11 GDDMQLVEIELDPGEGIRAEVGAMMYMEDGIAMQT---NTGGGLFRGLKRAFAG---ESFFITNFVQEGSGKGHVAFGAPYPGKILPIDLIQFNGSFICQKDSFLCAANGIEIEIEFTKRIGTGLFGGEGFILQRLEGHGMAFIHAGGTVIEKHLEPGETLRVDTGCIVGFQKTVKYDIQFVGGFKNALFGGEGMFLAKLTGPGTIYLQSLPFSRLA 221          
BLAST of mRNA_S-dermatodea_contig1080.541.1 vs. uniprot
Match: A0A316CV55_9BACT (Uncharacterized protein (TIGR00266 family) n=1 Tax=Oceanotoga teriensis TaxID=515440 RepID=A0A316CV55_9BACT)

HSP 1 Score: 94.7 bits (234), Expect = 1.790e-19
Identity = 65/224 (29.02%), Postives = 110/224 (49.11%), Query Frame = 0
Query:   22 LGDGNEVLQVALAPGDSILAAERAFCYRGLGLQLEAYPANTGA-LGRALGWMGM-KNDRVVKWTNEGTAPTYVGLAAPLPGKVIPVNLLQ-SGDLLAKPQMFLCSFTSNQLSASRLRLTPEGPFPQHNIDMRKIQGSGMCYIQAGGAAVQKTLGRSETMVAEIGCVAAISASCKIVAEEHTGFVREPPYTQG-FSVKITGPGTVFIQSTHAGRMSRDRMAVRAG 241
            +GD  +++++ L PG+ + A   A  Y    + ++    NTG  L R L  M   ++  +  +   G+   +V   AP PGK++P+NL   +G  + +   FLC+    ++     +    G F      ++++QG GM +I AGGA V+K L   E +  + GC+   S S     E   GF       +G F  K++GPGTV++QS    R++ DR+   +G
Sbjct:   10 VGDDMQLVEIELDPGEGVRAEAGAMMYMENDIMMQT---NTGGGLFRGLKRMFTGESFFITNFVQNGSGKGHVAFGAPYPGKIVPLNLTDFNGTFICQKDSFLCAANGIEIEIELTKKIGTGLFGGEGFILQRLQGHGMAFIHAGGALVEKQLNAGEILKVDTGCIVGFSNSIHYDIEFIGGFKNALFGGEGMFLAKLSGPGTVYLQSLPFSRLA-DRIVAASG 229          
BLAST of mRNA_S-dermatodea_contig1080.541.1 vs. uniprot
Match: A0A0K9PRK4_ZOSMR (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PRK4_ZOSMR)

HSP 1 Score: 94.7 bits (234), Expect = 2.880e-19
Identity = 66/221 (29.86%), Postives = 106/221 (47.96%), Query Frame = 0
Query:   19 FLSLGDGNEVLQVALAPGDSILAAERAFCYRGLGLQLE-AYPANTGALGRALGWMGMKNDRVVKWTNEGTAPTYVGLAAPLPGKVIPVNLLQ-SGDLLAKPQMFLCSFTSNQLSASRLRLTPEGPFPQHNIDMR-KIQGSGMCYIQAGGAAVQKTLGRSETMVAEIGCVAAISASCKIVAEEHTGFVREPPYTQG---FSVKITGPGTVFIQSTHAGRMSR 233
            F  LG   +++Q+ L     + A   + CY    +Q++  Y          L W+  K    +   N G+   YVG+AAP PG+++P++L    G+LL +P  FLCS     +S S          P   I +R K+ G G+ ++ +GG+  QKTL   ET+V +  C+ A++++     +      R      G    +V +TGPG VFIQS    R+S+
Sbjct:   25 FQILGGEAQIVQIMLKSLQKVTAKPGSMCYMSGSIQMDNVYALEQDGGVWQLQWIFGKTAISINLLNSGSDDGYVGIAAPSPGRILPIDLANFGGELLCQPDAFLCSVNDVTVSNSLEHPRGRNIMPGAEIVLRQKLVGQGLAFLVSGGSVAQKTLQPGETLVMDSACIIAMTSTISFQIKNMNA--RRAIIFGGENHMTVSLTGPGVVFIQSLPFYRLSK 243          
BLAST of mRNA_S-dermatodea_contig1080.541.1 vs. uniprot
Match: A0A5P1ENF3_ASPOF (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1ENF3_ASPOF)

HSP 1 Score: 93.2 bits (230), Expect = 1.010e-18
Identity = 65/222 (29.28%), Postives = 113/222 (50.90%), Query Frame = 0
Query:   19 FLSLGDGNEVLQVALAPGDSILAAERAFCYRGLGLQLEAY--PANTGALGRALGWMGMKNDRVVKWTNEGTAPTYVGLAAPLPGKVIPVNLLQ-SGDLLAKPQMFLCSFTSNQLSASRLRLTPEGPFPQHNIDMR-KIQGSGMCYIQAGGAAVQKTLGRSETMVAEIGCVAAISASCKIVAEEHTGFVREPPY---TQGFSVKITGPGTVFIQSTHAGRMSR 233
            F  +G   +++Q+ L   + + A     CY    +QL+    P + G    AL W+  KN   +  +N G    YVG+AAP P +++P++L    G++L +P  FLCS     + +S + L     F    + ++ K+ G G+ ++   G+ VQK L   E +V ++ C+ A++++     ++    VR   +   TQ F+  +TGPG VFIQS    R+S+
Sbjct:   25 FQIIGGEAQIVQIMLKSQEKVTAKPGTMCYTSGSIQLDNIYLPEHEGG---ALQWLLGKNATSIVLSNSGGDNGYVGIAAPSPARILPIDLANFGGEILIQPDAFLCSVNDVTIKSS-VDLRARNVFSGSEVFLKQKLVGQGLAFLVGCGSVVQKILDVGEVVVVDVACIVAMTSTIDFQLKQSNP-VRRTIFGGETQ-FTASLTGPGIVFIQSLPFHRLSQ 240          
BLAST of mRNA_S-dermatodea_contig1080.541.1 vs. uniprot
Match: A0A521RJ11_9GAMM (TIGR00266 family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RJ11_9GAMM)

HSP 1 Score: 92.4 bits (228), Expect = 1.240e-18
Identity = 70/248 (28.23%), Postives = 113/248 (45.56%), Query Frame = 0
Query:   23 GDGNEVLQVALAPGDSILAAERAFCYRGLGLQLEAYPANTGALGRALGWMGMKNDR---VVKWTNEGTAPTYVGLAAPLPGKVIPVNLLQ-SGDLLAKPQMFLCSFTSNQLSASRLRLTPEGPFPQHNIDMRKIQGSGMCYIQAGGAAVQKTLGRSETMVAEIGCVAAISASCKIVAEEHTGFVREPPYTQG-FSVKITGPGTVFIQS----------------THAGRMSRDRMAVRAGGAGGDMVK 249
            GD  ++++V L PG+ + A      Y   G++++    +TG  G   G+  M       +  + N G A   V  AAP PGK++P +L    G +L +   FLC+    ++  +  +    G F      ++K+ G+GM ++ AGG  ++K L   E +  + GC+ A + +     +   GF       +G F  K+TGPGTV++QS                TH G  SR       GG GG +VK
Sbjct:   11 GDDLQLVEVELDPGEGVRAEAGTMTYMEQGIEMQT---DTGG-GVFQGFKRMLTGESFFITTFMNSGKAKRRVAFAAPYPGKIVPFDLDSFGGQVLCQKDSFLCAARGTEIEIAFTKKIGAGLFGGEGFILQKLSGNGMVFVHAGGTVIRKDLAAGEELRVDTGCLVAFAMTVDYDIQFIGGFKNALFGGEGLFLAKMTGPGTVYLQSLPFSRLVDRIKAGITFTHGGDQSRG-----IGGIGGSIVK 249          
BLAST of mRNA_S-dermatodea_contig1080.541.1 vs. uniprot
Match: A0A4U7JC59_9FIRM (TIGR00266 family protein n=1 Tax=Ruminiclostridium herbifermentans TaxID=2488810 RepID=A0A4U7JC59_9FIRM)

HSP 1 Score: 92.4 bits (228), Expect = 1.270e-18
Identity = 61/217 (28.11%), Postives = 105/217 (48.39%), Query Frame = 0
Query:   22 LGDGNEVLQVALAPGDSILAAERAFCYRGLGLQLEAYPANTGALGRALGWMGMKNDRVVKWTNEGTAPTYVGLAAPLPGKVIPVNLLQ-SGDLLAKPQMFLCSFTSNQLSASRLRLTPEGPFPQHNIDMRKIQGSGMCYIQAGGAAVQKTLGRSETMVAEIGCVAAISASCKIVAEEHTGFVREPPYTQG-FSVKITGPGTVFIQSTHAGRMSRDRM 236
            +GD  +++++ L P + + A   A  Y    + ++      GAL      +  ++  +  + N GT   +V  +AP PGK+IP++L    G  L +   FLC     ++  +  R    G F      ++K+ G GM +I AGG  ++K L   +T+  + GC+ A S +     +   GF       +G F  K+TGPGTV++QS    R++ DR+
Sbjct:   10 IGDDMQIVEIELDPSEGVRAEAGAMMYTDQNIVMQT-STQGGALKGFKRMLTGESFFITTFYNTGTQKEHVAFSAPYPGKIIPIDLASVGGSFLCQKDAFLCCANGVEVEVAFTRKLGAGFFGGEGFILQKLVGDGMAFIHAGGTIIRKDLMPGQTLKVDTGCLVAFSPTVDYDIQFVGGFKNALFGGEGVFLAKMTGPGTVYLQSLPLARLA-DRL 224          
BLAST of mRNA_S-dermatodea_contig1080.541.1 vs. uniprot
Match: A0A2I0V769_9ASPA (Altered inheritance of mitochondria protein 24, mitochondrial n=3 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0V769_9ASPA)

HSP 1 Score: 92.8 bits (229), Expect = 1.410e-18
Identity = 61/220 (27.73%), Postives = 110/220 (50.00%), Query Frame = 0
Query:   19 FLSLGDGNEVLQVALAPGDSILAAERAFCYRGLGLQLEA--YPANTGALGRALGWMGMKNDRVVKWTNEGTAPTYVGLAAPLPGKVIPVNLLQ-SGDLLAKPQMFLCSFTSNQLSASRLRLTPEGPFPQHNIDMRKIQGSGMCYIQAGGAAVQKTLGRSETMVAEIGCVAAISASCKIVAEEHTGFVREPPYTQGF--SVKITGPGTVFIQSTHAGRMSR 233
            F  LG   +VLQ+ L P + + A     CY    +Q+    +P + G + +   W+  K+   + +TN G    +VG++AP P +++P++L    G++  +P  FLCS     +S +  +           I  +K+ G G+ ++  GG+ VQK L   E +V +  C+ A++ +     + ++  VR   +   +  +V +TGPG VFIQS    R+S+
Sbjct:   25 FQILGGEAQVLQIMLKPQEKVTAKPGTMCYMSGSVQINNIYFPEHEGGIWQ---WLFGKSATSIVFTNAGPDDGFVGISAPSPARILPIDLANFGGEIFCQPDAFLCSLNDVTISNAMDQRARNIASGVEVILKQKLVGQGLAFLVGGGSVVQKVLEDGEVVVVDAACLVAMTTTINSQVK-YSHPVRRAVFGGDYQVTVSLTGPGIVFIQSLPFHRLSQ 240          
BLAST of mRNA_S-dermatodea_contig1080.541.1 vs. uniprot
Match: A0A3N9QHI8_9RHOB (TIGR00266 family protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A3N9QHI8_9RHOB)

HSP 1 Score: 92.4 bits (228), Expect = 1.440e-18
Identity = 69/239 (28.87%), Postives = 117/239 (48.95%), Query Frame = 0
Query:   19 FLSLGDGNEVLQVALAPGDSILAAERAFCYRGLGLQLEAY-----PANTGALGRALG----WMGMKNDRVVKWTNEGTAPTYVGLAAPLPGKVIPVNLLQ-SGDLLAKPQMFLCSFTSNQLSASRLRLTPEGPFPQHNIDMRKIQGSGMCYIQAGGAAVQKTLGRSETMVAEIGCVAAISASCKIVAEEHTGFVREPPYT-QG-FSVKITGPGTVFIQSTHAGRMSRDRMAVRAGGAGG 245
            F   G+  + ++V L PG++ +    A  Y   G+ ++          +G +G  +G     +  ++     + NEG++   V  +A  PGK+IP++LL+  G L+A+   FLC+     L  +  +    G F      M+K++G G  ++ AGG   Q+ L   ET+  + GCV A   +     E + G V+   +  +G F  ++TGPGTV++QS    RM+ DR+   A  AGG
Sbjct:    8 FEIFGESMQYVEVELDPGEAAVGEAGAMYYMEDGIAMDTVFGDGSTGQSGLMGTLMGAGKRLLTGESVFTTVFVNEGSSKRKVAFSASYPGKIIPIHLLELGGTLIAQKDSFLCAAKGVSLGIALQKRLGAGLFGGEGFIMQKLEGDGYAFLHAGGTLTQRRLAPGETLRVDTGCVVAYQPTISFDIE-YVGKVKSALFGGEGLFFARMTGPGTVWLQSLPLSRMA-DRIIASAPKAGG 244          
BLAST of mRNA_S-dermatodea_contig1080.541.1 vs. uniprot
Match: A0A2A8D1C1_9BACT (TIGR00266 family protein n=1 Tax=Longibacter salinarum TaxID=1850348 RepID=A0A2A8D1C1_9BACT)

HSP 1 Score: 92.0 bits (227), Expect = 1.760e-18
Identity = 62/218 (28.44%), Postives = 105/218 (48.17%), Query Frame = 0
Query:   19 FLSLGDGNEVLQVALAPGDSILAAERAFCYRGLGLQLEAYPANTGALGRALGWMGMKNDR---VVKWTNEGTAPTYVGLAAPLPGKVIPVNLLQSGDLLAKPQMFLCSFTSNQLSASRLRLTPEGPFPQHNIDMRKIQGSGMCYIQAGGAAVQKTLGRSETMVAEIGCVAAISASCKIVAEEHTGFVREPPYTQG-FSVKITGPGTVFIQSTHAGRMS 232
            F   GD  ++++V L PG+++ A      Y   G++++    +TG  G   G+  M +     +  +T  G +   V  AAP PGK++PV+L Q    L +   FLC+    ++  +  +    G F      ++++ G G  ++ AGG  V+  L   ET+  + GC+AA S +         GF       +G F  K+TGPGTV++QS    R++
Sbjct:   11 FALKGDDMQLVEVELDPGEAVRAEAGTMLYMSDGVEMQT---DTGG-GMFKGFKRMISGESFFITSFTYSGPSKGRVAFAAPYPGKIVPVDLSQHDGFLCQKDAFLCADQDVEVEVAFNKKLGAGLFGGEGFILQRLTGQGWAFVHAGGTIVEHKLEAGETLRVDTGCIAAFSGTVDYDINFVGGFRNALFGGEGVFLAKLTGPGTVYLQSLPFARLA 224          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1080.541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ3_ECTSI8.220e-10763.42Altered inheritance of mitochondria protein 24, mi... [more]
A0A2K1NT36_9BACT8.720e-2027.65Uncharacterized protein n=1 Tax=Petrotoga sp. 9PWA... [more]
A0A316CV55_9BACT1.790e-1929.02Uncharacterized protein (TIGR00266 family) n=1 Tax... [more]
A0A0K9PRK4_ZOSMR2.880e-1929.86Altered inheritance of mitochondria protein 24, mi... [more]
A0A5P1ENF3_ASPOF1.010e-1829.28Altered inheritance of mitochondria protein 24, mi... [more]
A0A521RJ11_9GAMM1.240e-1828.23TIGR00266 family protein n=1 Tax=Gammaproteobacter... [more]
A0A4U7JC59_9FIRM1.270e-1828.11TIGR00266 family protein n=1 Tax=Ruminiclostridium... [more]
A0A2I0V769_9ASPA1.410e-1827.73Altered inheritance of mitochondria protein 24, mi... [more]
A0A3N9QHI8_9RHOB1.440e-1828.87TIGR00266 family protein n=2 Tax=Proteobacteria Ta... [more]
A0A2A8D1C1_9BACT1.760e-1828.44TIGR00266 family protein n=1 Tax=Longibacter salin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 21..226
e-value: 6.1E-30
score: 104.5
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10coord: 15..242
e-value: 8.5E-31
score: 108.8
NoneNo IPR availablePANTHERPTHR43657FAMILY NOT NAMEDcoord: 22..238
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..265
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..239
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 266..269
NoneNo IPR availableTMHMMTMhelixcoord: 243..265
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 22..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1080contigS-dermatodea_contig1080:10245..13543 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1080.541.1mRNA_S-dermatodea_contig1080.541.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1080 9944..13951 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1080.541.1 ID=prot_S-dermatodea_contig1080.541.1|Name=mRNA_S-dermatodea_contig1080.541.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=270bp
MDEASAAPSPASTDSTPRFLSLGDGNEVLQVALAPGDSILAAERAFCYRG
LGLQLEAYPANTGALGRALGWMGMKNDRVVKWTNEGTAPTYVGLAAPLPG
KVIPVNLLQSGDLLAKPQMFLCSFTSNQLSASRLRLTPEGPFPQHNIDMR
KIQGSGMCYIQAGGAAVQKTLGRSETMVAEIGCVAAISASCKIVAEEHTG
FVREPPYTQGFSVKITGPGTVFIQSTHAGRMSRDRMAVRAGGAGGDMVKA
AAITVGILVLLYALVDVEY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002838AIM24
IPR036983AIM24_sf
IPR016031Trp_RNA-bd_attenuator-like_dom