prot_S-dermatodea_contig10797.535.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10797.535.1
Unique Nameprot_S-dermatodea_contig10797.535.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length118
Homology
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BLAST of mRNA_S-dermatodea_contig10797.535.1 vs. uniprot
Match: A0A6H5K608_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K608_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 3.510e-40
Identity = 91/125 (72.80%), Postives = 101/125 (80.80%), Query Frame = 0 
Query:    1 MLQHVQGPAGRASATLLKLIREYLNVERSFAGVDMEDSLKTLRKTHEGEEATKVYEAFRSHAAIGRKNRLLLELLDDIRQANAEAKAFSSESK------EALEADENDAAAPS-LPTFAAGASVD 118
            +LQHVQGPAGRASA LL+LI+EYL VERSFAGVDMEDSLK LRKT+EGEEA KVY+AFRSHAAI RKNRLLL LLDDIRQANAEAKAF S+ +       A  A++   AAPS LP  + GASVD
Sbjct:  689 LLQHVQGPAGRASAALLQLIQEYLVVERSFAGVDMEDSLKALRKTYEGEEAIKVYDAFRSHAAIHRKNRLLLTLLDDIRQANAEAKAFLSKHRGGGLESSAGAAEDGLPAAPSALPALSGGASVD 813
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BLAST of mRNA_S-dermatodea_contig10797.535.1 vs. uniprot
Match: D8LHP3_ECTSI (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP3_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 8.850e-40
Identity = 90/125 (72.00%), Postives = 101/125 (80.80%), Query Frame = 0 
Query:    1 MLQHVQGPAGRASATLLKLIREYLNVERSFAGVDMEDSLKTLRKTHEGEEATKVYEAFRSHAAIGRKNRLLLELLDDIRQANAEAKAFSSESK------EALEADENDAAAPS-LPTFAAGASVD 118
            +LQHVQGPAGRASA LL+LI+EYL VERSFAGVDMEDSLK LRK +EGEEA +VY+AFRSHAAI RKNRLLL LLDDIRQANAEAKAF S+ +       A  A++   AAPS LPT + GASVD
Sbjct:  881 LLQHVQGPAGRASAALLQLIQEYLVVERSFAGVDMEDSLKALRKAYEGEEAIRVYDAFRSHAAIHRKNRLLLTLLDDIRQANAEAKAFLSKHRGGGLESSAGAAEDGLPAAPSALPTLSGGASVD 1005
[Close]
BLAST of mRNA_S-dermatodea_contig10797.535.1 vs. uniprot
Match: A0A0B4L7U5_9STRA (Acetyl-CoA carboxylase (Fragment) n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7U5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 6.500e-11
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 0 
Query:    4 HVQGPAGRASATLLKLIREYLNVERSFAGVDMEDSLKTLRKTHEGEEATKVYEAFRSHAAIGRKNRLLLELLDDIRQANAEAK 86
            +V G  GR    LL ++R+YLNVER F+G   +D ++ LR+ H GE    +Y+  RSHAA+ RKN LLL LL+ I  A ++A+
Sbjct:  899 YVNGIPGRTVVALLGVVRQYLNVERHFSGYQYQDVVQRLRRAHSGE-LHLIYDYCRSHAALPRKNALLLTLLEHISVAASKAR 980
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10797.535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K608_9PHAE3.510e-4072.80Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP... [more]
D8LHP3_ECTSI8.850e-4072.00Acetyl-CoA carboxylase n=1 Tax=Ectocarpus siliculo... [more]
A0A0B4L7U5_9STRA6.500e-1145.78Acetyl-CoA carboxylase (Fragment) n=1 Tax=Nannochl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..98
IPR013537Acetyl-CoA carboxylase, central domainPFAMPF08326ACC_centralcoord: 5..97
e-value: 8.2E-16
score: 57.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10797contigS-dermatodea_contig10797:2903..5632 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10797.535.1mRNA_S-dermatodea_contig10797.535.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10797 2903..5632 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10797.535.1 ID=prot_S-dermatodea_contig10797.535.1|Name=mRNA_S-dermatodea_contig10797.535.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=118bp
MLQHVQGPAGRASATLLKLIREYLNVERSFAGVDMEDSLKTLRKTHEGEE
ATKVYEAFRSHAAIGRKNRLLLELLDDIRQANAEAKAFSSESKEALEADE
NDAAAPSLPTFAAGASVD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013537AcCoA_COase_cen