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Homology
BLAST of mRNA_S-dermatodea_contig10797.535.1 vs. uniprot
Match: A0A6H5K608_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K608_9PHAE) HSP 1 Score: 151 bits (382), Expect = 3.510e-40 Identity = 91/125 (72.80%), Postives = 101/125 (80.80%), Query Frame = 1
Query: 1 MLQHVQGPAGRASATLLKLIREYLNVERSFAGVDMEDSLKTLRKTHEGEEATKVYEAFRSHAAIGRKNRLLLELLDDIRQANAEAKAFSSESK------EALEADENDAAAPS-LPTFAAGASVD 354
+LQHVQGPAGRASA LL+LI+EYL VERSFAGVDMEDSLK LRKT+EGEEA KVY+AFRSHAAI RKNRLLL LLDDIRQANAEAKAF S+ + A A++ AAPS LP + GASVD
Sbjct: 689 LLQHVQGPAGRASAALLQLIQEYLVVERSFAGVDMEDSLKALRKTYEGEEAIKVYDAFRSHAAIHRKNRLLLTLLDDIRQANAEAKAFLSKHRGGGLESSAGAAEDGLPAAPSALPALSGGASVD 813
BLAST of mRNA_S-dermatodea_contig10797.535.1 vs. uniprot
Match: D8LHP3_ECTSI (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP3_ECTSI) HSP 1 Score: 150 bits (379), Expect = 8.850e-40 Identity = 90/125 (72.00%), Postives = 101/125 (80.80%), Query Frame = 1
Query: 1 MLQHVQGPAGRASATLLKLIREYLNVERSFAGVDMEDSLKTLRKTHEGEEATKVYEAFRSHAAIGRKNRLLLELLDDIRQANAEAKAFSSESK------EALEADENDAAAPS-LPTFAAGASVD 354
+LQHVQGPAGRASA LL+LI+EYL VERSFAGVDMEDSLK LRK +EGEEA +VY+AFRSHAAI RKNRLLL LLDDIRQANAEAKAF S+ + A A++ AAPS LPT + GASVD
Sbjct: 881 LLQHVQGPAGRASAALLQLIQEYLVVERSFAGVDMEDSLKALRKAYEGEEAIRVYDAFRSHAAIHRKNRLLLTLLDDIRQANAEAKAFLSKHRGGGLESSAGAAEDGLPAAPSALPTLSGGASVD 1005
BLAST of mRNA_S-dermatodea_contig10797.535.1 vs. uniprot
Match: A0A0B4L7U5_9STRA (Acetyl-CoA carboxylase (Fragment) n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7U5_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 6.500e-11 Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 1
Query: 10 HVQGPAGRASATLLKLIREYLNVERSFAGVDMEDSLKTLRKTHEGEEATKVYEAFRSHAAIGRKNRLLLELLDDIRQANAEAK 258
+V G GR LL ++R+YLNVER F+G +D ++ LR+ H GE +Y+ RSHAA+ RKN LLL LL+ I A ++A+
Sbjct: 899 YVNGIPGRTVVALLGVVRQYLNVERHFSGYQYQDVVQRLRRAHSGE-LHLIYDYCRSHAALPRKNALLLTLLEHISVAASKAR 980
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 155.2 |
| Seed ortholog evalue | 1.9e-35 |
| Seed eggNOG ortholog | 2880.D8LHP3 |
| Preferred name | ACACB |
| KEGG rclass | RC00040,RC00253,RC00367 |
| KEGG ko | ko:K01946,ko:K11262 |
| KEGG Reaction | R00742,R04385,R04386 |
| KEGG Pathway | ko00061,ko00254,ko00620,ko00640,ko01100,ko01110,ko01212,ko04152,ko04910,ko04920,ko04922,ko04931,map00061,map00254,map00620,map00640,map01100,map01110,map01212,map04152,map04910,map04920,map04922,map04931 |
| KEGG Module | M00082 |
| GOs | GO:0000166,GO:0000902,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001101,GO:0001650,GO:0001676,GO:0001894,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0003989,GO:0004075,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0005829,GO:0005856,GO:0005975,GO:0005976,GO:0005977,GO:0006073,GO:0006082,GO:0006084,GO:0006091,GO:0006109,GO:0006112,GO:0006139,GO:0006163,GO:0006164,GO:0006355,GO:0006606,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006638,GO:0006639,GO:0006641,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006839,GO:0006853,GO:0006869,GO:0006886,GO:0006913,GO:0006996,GO:0006997,GO:0006998,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009374,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009744,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0009991,GO:0010033,GO:0010256,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0010876,GO:0010883,GO:0010884,GO:0010906,GO:0012505,GO:0014070,GO:0015031,GO:0015629,GO:0015711,GO:0015718,GO:0015833,GO:0015849,GO:0015908,GO:0015909,GO:0015980,GO:0016020,GO:0016043,GO:0016053,GO:0016421,GO:0016874,GO:0016879,GO:0016885,GO:0017038,GO:0017076,GO:0018130,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019222,GO:0019432,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0019842,GO:0019867,GO:0019899,GO:0019900,GO:0019904,GO:0022607,GO:0030554,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031406,GO:0031667,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0031998,GO:0031999,GO:0032365,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032810,GO:0032870,GO:0032879,GO:0032989,GO:0033036,GO:0033218,GO:0033293,GO:0033365,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034220,GO:0034285,GO:0034504,GO:0034613,GO:0034641,GO:0034654,GO:0034694,GO:0034695,GO:0035257,GO:0035337,GO:0035383,GO:0035384,GO:0035639,GO:0036094,GO:0040008,GO:0040029,GO:0042175,GO:0042221,GO:0042493,GO:0042592,GO:0042759,GO:0042802,GO:0042886,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0043933,GO:0044042,GO:0044085,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045017,GO:0045184,GO:0045540,GO:0045833,GO:0045893,GO:0045922,GO:0045927,GO:0045935,GO:0046320,GO:0046322,GO:0046390,GO:0046394,GO:0046460,GO:0046463,GO:0046483,GO:0046486,GO:0046620,GO:0046622,GO:0046890,GO:0046907,GO:0046942,GO:0046949,GO:0046966,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048638,GO:0048639,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050662,GO:0050692,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050810,GO:0050896,GO:0050994,GO:0050995,GO:0051094,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051427,GO:0051641,GO:0051649,GO:0051716,GO:0055085,GO:0055086,GO:0055088,GO:0055114,GO:0060249,GO:0060255,GO:0060420,GO:0060421,GO:0061024,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070542,GO:0070727,GO:0070887,GO:0071229,GO:0071310,GO:0071322,GO:0071324,GO:0071329,GO:0071379,GO:0071380,GO:0071396,GO:0071398,GO:0071495,GO:0071616,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0072594,GO:0080090,GO:0090181,GO:0090407,GO:0097009,GO:0097066,GO:0097159,GO:0097305,GO:0097306,GO:0097367,GO:0098588,GO:0098656,GO:0098805,GO:0098827,GO:0106118,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901654,GO:1901655,GO:1901681,GO:1901700,GO:1901701,GO:1902001,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:1903825,GO:1905039,GO:1905952,GO:1905954,GO:1990542,GO:1990837,GO:2000026,GO:2000112,GO:2001141,GO:2001293,GO:2001295 |
| EggNOG free text desc. | acetyl-CoA carboxylase |
| EggNOG OGs | COG0439@1,KOG0368@2759 |
| EC | 2.1.3.15,6.3.4.14,6.4.1.2 |
| COG Functional cat. | I |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 354 |
| Cds size | 354 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10797.535.1 >prot_S-dermatodea_contig10797.535.1 ID=prot_S-dermatodea_contig10797.535.1|Name=mRNA_S-dermatodea_contig10797.535.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=118bp
MLQHVQGPAGRASATLLKLIREYLNVERSFAGVDMEDSLKTLRKTHEGEE ATKVYEAFRSHAAIGRKNRLLLELLDDIRQANAEAKAFSSESKEALEADE NDAAAPSLPTFAAGASVD back to topmRNA from alignment at S-dermatodea_contig10797:2903..5632- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig10797.535.1 ID=mRNA_S-dermatodea_contig10797.535.1|Name=mRNA_S-dermatodea_contig10797.535.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2730bp|location=Sequence derived from alignment at S-dermatodea_contig10797:2903..5632- (Saccorhiza dermatodea SderLu1190fm monoicous) ATGCTCCAGCACGTCCAAGGGCCGGCCGGCAGGGCCTCCGCCACGCTGCT
CAAGCTGATCCGAGAGTACCTCAACGTAGAGAGGAGCTTCGCAGGTGCGG
CCTTTACGAGACAGGGCCGCTTTGTGCCTACCGTCGTGCTTACTGTTGTG
CACCCGCGTGTACTCTGTGTACCTGGTATCGTACGTTGCGCGCTGGCGTG
GTGCGCGCGTTCGGTCGTCGGTCAAGCTCGACGCGCGACATCAGCGACCC
TTGCTTTAACCCTTTTGGTACTAGCCCCCTGTTTGGAGCGCCTGTTAGCA
CGCAATGAGGCGTACTTGAAGCGGGTTATGACGCAGGAATGAGAGAGAAC
GGAGAACAAGGGAAACGGGGATGTAACTGTCGACTGGCATCGAGAGAGTT
TTTGGTCGTTTCGGAGAGCCCTATTGATTTCTAATACTAATTTAATACAG
TAGTACTGTACCAAAGGGTTAACGAAACCGTCGGTTGCTGCGACGATCGA
CATATTTTATTTTCGTTCTCTTTTTTTATCCTATTCGCTGCGCGCGGCGC
TGCTGGTACCTATCCGTCGTGCTGTCAAGAGCCGCTCTGGTTTTGCTCCA
GCTCTCTTGCCGCGTATTAATTTAACATCGAGCTACGATGTACTGTGCCT
GTTGCCGTTGTGTTTATGCTGTATGCCATGTATCTTCGTCCAGCTTTGAT
GGAGTCGTATGTAGAATGCTCTCACTTCGCAAAAGGCAGATTGCCCCAGA
AAGGAAATACGAGGTCCCTTGGAGTAAGAAATGCGGTAGCACGCTCGCAG
AATACTGACTTGAGAGTTCGCCGAGGTACGTCCTGCTGACCCAAGTATTT
TACTCGGGGAGTCGCCTGACCCATGTTCCACAAAGGACATTTTCTTTCGG
GCGGGCGATGAAATCAATCGTCTCGGTTTTGTGTACAGCAAAATCTCCGC
CCTGGTCCTGTCCCGATGAGTTATGCATTGTATTGCATACTTTCTGTGTT
CTGTTTTTTATTTTTACAAAAAAGGAAATACAAGTTGGGTATGTATCTTG
GCACTACTTTTGTTGAGAAAGCCGTTGGTTAGGAGAGAGTGAATTGCCTG
GTACGAGTGTCGGCGCGCGAATACGTGTAATACCTCCCACAGTCCAGTGC
ATGGAGACGAGTTACAAGGGTTTGTGTGCATGGCATCTTCACCACCCCCC
CCCCCACCCCCCCTCCCCCCCGTTTAGACAAGAGAATATATAAAATAAGG
TATTTTCGAACGAGACACTCACTGGTGTTGAGGTTCGAGTTCCTCTCTGG
TATGAAGGGATCGAATCCCAGCGTGTGTCCTCAGTGATGATAGGTATGAT
ACGTGTCGAGCTATGCTAGATGTTATCACTACCCACCCCCCTACTCCCAC
CCCCCCCCCGAAAAACAAACAAACGTAACTTACACCGGACGGCACTATTG
TTCAAAGCCTCTTTAATGGTAAGGTATCGCAGCCTACACCACCCCCCCCC
CCCCCCCTGGATATAAAAACAAGCGCTATCGAACGAGACCCCGCCCCCCA
GCCCCCCAGGCCCCAGAGAAGGTGCAGACTCCTACCGACACAATCAGACG
CGTATTCACGGACATGACATCTTCATCCCTCTCCTCCCTTCTCCCCTGAC
TGACCCCACCCACCCCTCATCCCCCCGACCCCCGACCCCCGGCAACGCGA
TGTTATTTTCGCCTCGACCGCAGGTGTCGATATGGAAGATTCCCTTAAGA
CTCTGCGCAAGACCCACGAGGGGGAGGAGGCGACGAAGGTATACGAGGCT
TTCCGCAGCCACGCCGCCATCGGGCGCAAGAACCGCCTGCTGCTTGAGCT
GCTGGACGACATACGCCAGGCCAACGCCGAGGTGAGGAGTGCTCTTTTGT
TTTTGTGTTGTTGTGAGTGTGTGTGTGTGTGTTCGTGGTTGGTTTGTCAC
GAACCACGACTGACGGACCGGCCTCATATCCGAATCCTCGTCTCCCCCGT
CTGTTTTGTTTTTGTTTTTGTGTTTTGGTTTGTGTTTGGTGTGTTTTTGT
GTTCTTGTGTGTGCGTGATTGTTTTTGTTTTTTGTGAGTGGTGTTTTTTG
TTTTTGTGAGTGTGTTGTGTTATTACTATTAATAAGTGTTTTTTGTTGTA
CTTGATTACGCCGTACCATAGGGGGGAGGGACCCTGCAGAACGACTTGAG
CTTCTTGCACTTCCGGTCGGAGCGCGGTTCACGATATCTACCTGCTGTGT
TGATTCTTTTTGGCGCCTTTTTGAGGACTCGATGCGCAACTAACAATGTC
GGAAACCGTATTCTATGCCCTTATTCAAAACAAAGGAAGAACGCAAGCGT
TTACAGTTCATATTTGACAATGTTTTGTTTTTGATTATTTTGTAAAACAC
ACCGGGCTAAGGCTTTCTTCTCCGAGTCCAGTAATAAAACATGCAACGAA
AACCAGCGTTACACAGCTTTTGTTTTCCCTGAAAGCACCAGGCCAAGGCT
GTTCTCCTCCGACGTTACAATAAAAAAAATACGAAAACGAAAACGAAAAC
GAAAACAAGCATTACATAACATACATACTTGTACTGTTTTTGTTGTTTTT
GTTATTTTTCCTCAAAACGCGCTGGCAGGCTAAGGCTTTCTCCTCCGAGT
CGAAGGAGGCTCTGGAGGCGGACGAGAATGACGCCGCGGCGCCGTCCTTG
CCAACGTTCGCTGCGGGCGCTTCGGTGGAC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig10797:2903..5632- >mRNA_S-dermatodea_contig10797.535.1 ID=mRNA_S-dermatodea_contig10797.535.1|Name=mRNA_S-dermatodea_contig10797.535.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=708bp|location=Sequence derived from alignment at S-dermatodea_contig10797:2903..5632- (Saccorhiza dermatodea SderLu1190fm monoicous) ATGCTCCAGCACGTCCAAGGGCCGGCCGGCAGGGCCTCCGCCACGCTGCT CAAGCTGATCCGAGAGTACCTCAACGTAGAGAGGAGCTTCGCAGATGCTC CAGCACGTCCAAGGGCCGGCCGGCAGGGCCTCCGCCACGCTGCTCAAGCT GATCCGAGAGTACCTCAACGTAGAGAGGAGCTTCGCAGGTGTCGATATGG AAGATTCCCTTAAGACTCTGCGCAAGACCCACGAGGGGGAGGAGGCGACG AAGGTATACGAGGCTTTCCGCAGCCACGCCGCCATCGGGCGCAAGAACCG CCTGCTGCTTGAGCTGCTGGACGACATACGCCAGGCCAACGCCGAGGTGT CGATATGGAAGATTCCCTTAAGACTCTGCGCAAGACCCACGAGGGGGAGG AGGCGACGAAGGTATACGAGGCTTTCCGCAGCCACGCCGCCATCGGGCGC AAGAACCGCCTGCTGCTTGAGCTGCTGGACGACATACGCCAGGCCAACGC CGAGGCTAAGGCTTTCTCCTCCGAGTCGAAGGAGGCTCTGGAGGCGGACG AGAATGACGCCGCGGCGCCGTCCTTGCCAACGTTCGCTGCGGGCGCTTCG GTGGACGCTAAGGCTTTCTCCTCCGAGTCGAAGGAGGCTCTGGAGGCGGA CGAGAATGACGCCGCGGCGCCGTCCTTGCCAACGTTCGCTGCGGGCGCTT CGGTGGAC back to top
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