prot_S-dermatodea_contig10785.530.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10785.530.1
Unique Nameprot_S-dermatodea_contig10785.530.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length139
Homology
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BLAST of mRNA_S-dermatodea_contig10785.530.1 vs. uniprot
Match: D8LD93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD93_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.040e-10
Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 0 
Query:   16 VRFNYQVRVVLVPSRSELEFLKGDIWWAEDDYFEFRREYILAMRALAQGGPAEQESTLEDTSCEDTPQV 84
            VRFN+QVRVVLVPSR EL  L  ++WW  +DY EFRRE++ AMR  A        + +E+ + ++TP V
Sbjct:  105 VRFNHQVRVVLVPSRKELRPLIEELWWGTNDYVEFRREFVQAMREAAA-------AEVENRANQETPSV 166
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BLAST of mRNA_S-dermatodea_contig10785.530.1 vs. uniprot
Match: A0A6H5KW42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW42_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.140e-10
Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = 0 
Query:   16 VRFNYQVRVVLVPSRSELEFLKGDIWWAEDDYFEFRREYILAMRALA 62
            VRFN+QVRVVLVPSR EL  L  ++WW  +DY EFRRE++ AMR  A
Sbjct:  111 VRFNHQVRVVLVPSRKELRPLMEELWWGTNDYVEFRREFVQAMREAA 157
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10785.530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD93_ECTSI1.040e-1049.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW42_9PHAE1.140e-1063.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10785contigS-dermatodea_contig10785:1897..5270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10785.530.1mRNA_S-dermatodea_contig10785.530.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10785 1897..5270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10785.530.1 ID=prot_S-dermatodea_contig10785.530.1|Name=mRNA_S-dermatodea_contig10785.530.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=139bp
AGDAAVPPAKPPARCVRFNYQVRVVLVPSRSELEFLKGDIWWAEDDYFEF
RREYILAMRALAQGGPAEQESTLEDTSCEDTPQVQLETPTLHSLPISSPP
PSQPHHGPLSRKAPLQPPSGVVLAATISPYALAAAAAAS
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