prot_S-dermatodea_contig1078.529.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1078.529.1
Unique Nameprot_S-dermatodea_contig1078.529.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length512
Homology
BLAST of mRNA_S-dermatodea_contig1078.529.1 vs. uniprot
Match: D8LJ12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ12_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 3.260e-9
Identity = 77/174 (44.25%), Postives = 91/174 (52.30%), Query Frame = 0
Query:  167 GAYKNSTPPPVPT--QGRLRR-SAFAAPASG-GYVDSPPEDVTSGRENSEKEARMSRKTAXXXXXXXXXXXXXXXXXEEAEAVRKMQRTIITLEVQLLVKDIVDGACVRAAXXXXXXXXXXXXXXXXXS--------VSASLPPAPHPRLSSTAAHLEQQRPAFFEALWNASGG 328
            G    STP PV     GRLRR +A   P  G G          S +       R     A                 E+AEA R+++  IITLE++LLVKD+VD ACVRA XXXXXXXXXXXXXXX  S        VS+S+ PAP PRLS+TA   E+Q  +FF   WNA GG
Sbjct:  405 GLSSKSTPDPVVQGRTGRLRRQTASPTPVEGLGTSSXXXXXXRSEKAKKSTTGRDREHPAREDAASAERVATLLKAEEDAEARRQLEHRIITLEMKLLVKDLVDTACVRAXXXXXXXXXXXXXXXXNQSSLKWTPLSVSSSVAPAPLPRLSATAVQAERQ--SFFGNFWNAGGG 576          
BLAST of mRNA_S-dermatodea_contig1078.529.1 vs. uniprot
Match: A0A6H5L4I2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I2_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 7.510e-9
Identity = 73/184 (39.67%), Postives = 96/184 (52.17%), Query Frame = 0
Query:  155 KGLLGALQWNLGGAYKNSTPPPVPTQGRLRRSAFAAPASGGYVDSPPEDVTSGRENSEKEARMS------RKTAXXXXXXXXXXXXXXXXXEEAEAVRKMQRTIITLEVQLLVKDIVDGACVRAAXXXXXXXXXXXXXXXXXS--------VSASLPPAPHPRLSSTAAHLEQQRPAFFEALWN 324
            KG+ G+ Q  LG    + + P +  Q R  R A    +          D +    +SE++A  S         A                 E+AEA R+++  I+TLE++LLVKD+VD ACVRA XXXXXXXXXXXXXXX  S        VS+S+ PAP PRLS+TA   E+Q  +FF  LWN
Sbjct: 1362 KGVWGSFQRTLGAGLSSKSTPDIVVQRRTGRLARQTVSPTPVERLGTSDSSKSSSHSEQKAEKSTTGGDREHPAREDAASPERVAALLKAEEDAEARRQLEHRIVTLEMKLLVKDLVDTACVRAXXXXXXXXXXXXXXXXNQSSLKWTPLSVSSSVAPAPLPRLSATAVQAERQ--SFFGNLWN 1543          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1078.529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ12_ECTSI3.260e-944.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4I2_9PHAE7.510e-939.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 219..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1078contigS-dermatodea_contig1078:7513..10893 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1078.529.1mRNA_S-dermatodea_contig1078.529.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1078 7513..10893 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1078.529.1 ID=prot_S-dermatodea_contig1078.529.1|Name=mRNA_S-dermatodea_contig1078.529.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=512bp
SIDPSPEQVALAAVSFDPSAPEGLREKNLDQLQVERSHTVNDSRLPPAVP
VPSRSAGKSTGGGWGRGRTSSSATGNDGTYGNWGSRRRAMSTTEEGDAGV
AALMVTPTGISSRTSSPLVRTRSGSGAGSSGKGGKWPFSRKKRDGITGEG
KAGKKGLLGALQWNLGGAYKNSTPPPVPTQGRLRRSAFAAPASGGYVDSP
PEDVTSGRENSEKEARMSRKTARKNAAAAERVARRLRAEEEAEAVRKMQR
TIITLEVQLLVKDIVDGACVRAAERASEGLVESSVKSTPRSVSASLPPAP
HPRLSSTAAHLEQQRPAFFEALWNASGGGGERKDRRHTNAGTGDEGAAGS
IWRAGSRDIASAQASGQRTGAGAGLGKEGDTQQEEGFFETLRRKLFDGEK
LRVEEEARKAAAATATHADVASAAPEEMAREEAGTGLGDEESPDPSKATA
TSSAVQSSLKFTPVRAAERSGGDVDGDGDGGGGGASGGSRFLRGKPAAAV
ASAYGARTSRAT
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