prot_S-dermatodea_contig1074.504.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1074.504.1
Unique Nameprot_S-dermatodea_contig1074.504.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length781
Homology
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BLAST of mRNA_S-dermatodea_contig1074.504.1 vs. uniprot
Match: D8LT37_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT37_ECTSI)

HSP 1 Score: 592 bits (1527), Expect = 6.400e-202
Identity = 346/624 (55.45%), Postives = 425/624 (68.11%), Query Frame = 0 
Query:  161 MDEEDKKALVLQLADWDPLKKVKVVKAWEATDPRITAEYLLGLIREEQVRSNTCGNLWQCSLCPIKHEVEIEARMRRGEHRRKDRTVDAVGVLYDYHSEGKGA-TDIYRSPHDSLFAFTPPIENVNRRQRSRRRDRGAVSGKGVGQEWQDPQSHNVGCGRTVGGGSIDGRICSKPAEGGGRGALSTNEARQAEETEAEHSPSRAERPLAMIQTPHLILTYAGREFDPRRMCAACTEEL--RGAVISSGHDLEVWHTVDNERRALMERQHQNDLFKAGWAEREREYRQVSELLRLVCEANLEAFSRHSIEERARANRDIQA----SFYHLKLSNLAAVEGGATKDEGLKRSNEKEATSWAATLRLKASLNMDRTYASLEPGGISASLRRRHTTSTKPADFLDDGTPVTPQGATQTFGRAGPPPDDESADIHLWKLQAEDAEDLLDRRQEVRDRHLLCGRQARFSYLCGRWLGAASDIEELQRLKKIMEDIERERRKKEREAAELRRKQQLADLRAAAGCRATGEARRIVEHDKEAEEIKKREEEXXXXXKKQEVAQLADGDRYWGIFREIQRLRALEDMRRIAWEARIRVTREKMVAVRCISELSAFSHATPPKDPELAQKIETL 777
            M ++DKK L+LQLADW+P++KVKV+KAWEATDP +TA +LL LIREEQ R     +LWQCSLCP+K  VE+EARM+RGEHRRKDRT+DA G LYDY  +G G   D Y S H+SLF F        ++QR +                QD      G                     GG GA        AE T          +PL   Q    +   AG       + ++  +E   R A+ISSGHDLE+WHTVD+ERRAL+  Q + D+ KA WAERER+ RQVSELLRL+ EANL+AFSRHS+E+RA A +++Q         LKLS+ AAV  GA KDEGLKR NE+EAT+WAA L+LKA+LNMDR YASLEPGG+ ASLRRR+ TS++P+DFLDDGTP TPQGA QTFGRA PP D+ES  I LWK  A++ E++LD R++VR+    CGR+ARFS LC RW+G ASDIEE QR K+++E  ERE+R +ER+AA+L RK+QLA+LRA AG RATGE RR VE DKEAEE K+ E E      ++E AQLA GDRYWG+ RE+QRLR +E+ RR AWE RIR T+EKMVAVRCISELS F+HATPP DPEL Q+I+ L
Sbjct:    1 MSQQDKKILLLQLADWNPVRKVKVMKAWEATDPAMTAGFLLELIREEQARGEGPDSLWQCSLCPVKRNVEVEARMKRGEHRRKDRTIDA-GSLYDYRVKGSGGGPDTYSSAHESLFEF--------KQQRHQHLQ-------------QDESPWETG------------------GTAGGAGA--------AEGT----------KPLGGAQKTRYVEDRAGTASGAGDLASSPAKECLDRSAIISSGHDLELWHTVDHERRALLTGQRRADVLKARWAERERKDRQVSELLRLISEANLDAFSRHSLEDRAMAAQNLQVVDVRRMLDLKLSHSAAVNSGACKDEGLKRLNEREATAWAAKLKLKAALNMDRHYASLEPGGLPASLRRRNPTSSQPSDFLDDGTPATPQGAMQTFGRACPPEDNESGAIRLWKRGAKETEEVLDLRRDVREWQSSCGRRARFSDLCERWVGVASDIEEKQRQKRMIEAAEREKRMRERQAAKLLRKRQLAELRANAGSRATGEERRKVERDKEAEERKRLEGEELERMSREEAAQLAGGDRYWGLIRELQRLRVIEEERRRAWEVRIRATKEKMVAVRCISELSDFTHATPPIDPELQQQIDRL 566
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1074.504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT37_ECTSI6.400e-20255.45C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 680..711
NoneNo IPR availableCOILSCoilCoilcoord: 21..41
NoneNo IPR availableCOILSCoilCoilcoord: 625..666

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1074contigS-dermatodea_contig1074:6999..17089 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1074.504.1mRNA_S-dermatodea_contig1074.504.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1074 6999..17089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1074.504.1 ID=prot_S-dermatodea_contig1074.504.1|Name=mRNA_S-dermatodea_contig1074.504.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=781bp
MDTKQRSSRRGVGRAPSELKKNDGKAEARAAEKRKVAARRQELLLGLSAE
DKSEMTSFMGSVNAKARSNLQDVVRLLSSSGKDPRLLIKKVLVHGLAHLS
MDRCISFLETMVKLGQEATLQLLWLYERYSVPNAGNGMTKCSADHFGRDI
GVGRMDEIFGMDEEDKKALVLQLADWDPLKKVKVVKAWEATDPRITAEYL
LGLIREEQVRSNTCGNLWQCSLCPIKHEVEIEARMRRGEHRRKDRTVDAV
GVLYDYHSEGKGATDIYRSPHDSLFAFTPPIENVNRRQRSRRRDRGAVSG
KGVGQEWQDPQSHNVGCGRTVGGGSIDGRICSKPAEGGGRGALSTNEARQ
AEETEAEHSPSRAERPLAMIQTPHLILTYAGREFDPRRMCAACTEELRGA
VISSGHDLEVWHTVDNERRALMERQHQNDLFKAGWAEREREYRQVSELLR
LVCEANLEAFSRHSIEERARANRDIQASFYHLKLSNLAAVEGGATKDEGL
KRSNEKEATSWAATLRLKASLNMDRTYASLEPGGISASLRRRHTTSTKPA
DFLDDGTPVTPQGATQTFGRAGPPPDDESADIHLWKLQAEDAEDLLDRRQ
EVRDRHLLCGRQARFSYLCGRWLGAASDIEELQRLKKIMEDIERERRKKE
REAAELRRKQQLADLRAAAGCRATGEARRIVEHDKEAEEIKKREEEELEK
MKKQEVAQLADGDRYWGIFREIQRLRALEDMRRIAWEARIRVTREKMVAV
RCISELSAFSHATPPKDPELAQKIETLAAM*
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