prot_S-dermatodea_contig10701.486.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10701.486.1
Unique Nameprot_S-dermatodea_contig10701.486.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length682
Homology
BLAST of mRNA_S-dermatodea_contig10701.486.1 vs. uniprot
Match: A0A6H5L2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E6_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 1.100e-98
Identity = 218/537 (40.60%), Postives = 257/537 (47.86%), Query Frame = 0
Query:   61 DAIDILRRHPSFK-TLDSGTISELGKLGVTTFLPFGPSGGFPGLRVEDVADAEGGGGLSEDEDTVRAGGHSSPSATDDPVDNPSVELDSFLQDNESGGHEGSPFCDVDGKQVHKQRVLTEFMGSQFGSASRDRLKRVRGPTVGSSG-VPGLPGVGDGDTQGAGIGNTDARSLSVGDPFAMMVM---MSPGQYALGLLSCTAAPSEGTRAGSGEVVKGRLMKLKQTRRALEVDERAIIPATNS---------APLADSWDHWGELGMHKWELQCKCRLVFPLYPDLVQEPIVVKETVTRTLMGVEPPMQETVEIENVVDRTSFWFSLPDLVAVKGLLVDEVGAFKAWRHLPHQNIARAEANPLPIHEDLFHVEADTVGAAPAGGTGAEKIWCKLCLSQLPRLKMRMNVGGHILKDETLQVSTVCGFCGGSGCRTTIKDLTGKAAPLMHSNCVSAPRKDARHEVVAVNLKSARAGSDTSPCTNLVVKCIFCSLETYVWKYGMADHVARCHKEDTGVEDGTESGQNFKKEYTASESEKTK 583
            DA+DILR HPS++ +++  TISEL K+GVTTFLPFG + G                          AGG                ELD+FL   ESG  E +  C+VDGKQ+HKQR LTEFMG  F +ASRDRLKR+RG T G SG   G  GVG    + AGIGNTD+R + VGDPFAM+V    M P QYALGL SCT AP +        V KGRLMKL++++ A  V    +     +         AP  DSW HWG+LG+HK EL CKCRLV  L PD                                                                                 +D +                                      GGHILKD+   VST CGFCGG G  TTI D  GKA PL+HS C SAPR DAR E VA+NL SARAGSDTS CTN+V KC FCS   Y+WKY M+DH+ RCH+ D  V +GT    NFK+  T SESEK K
Sbjct:  155 DAVDILRGHPSYEASVNRETISELQKVGVTTFLPFGATEGL-------------------------AGG----------------ELDAFLHATESGPGEITSSCEVDGKQIHKQRALTEFMGPAFQNASRDRLKRLRGYTAGQSGSATGSRGVGGRGEEAAGIGNTDSRGIVVGDPFAMLVATPGMRPAQYALGLFSCTKAPMDEQAQDGSPVFKGRLMKLQRSKVAPAVGAVRLGEGDGTSSSDFGEDGAPAKDSWQHWGDLGLHKGELSCKCRLVLALDPD---------------------------------------------------------------------------------DDAYR-------------------------------------GGHILKDK---VSTACGFCGGVGRPTTIHDPPGKARPLVHSTCPSAPRSDARQEAVALNLSSARAGSDTSLCTNMVFKCFFCSQYNYIWKYSMSDHITRCHQADVLVAEGT-GADNFKETCTISESEKAK 528          
BLAST of mRNA_S-dermatodea_contig10701.486.1 vs. uniprot
Match: A0A6H5K6M3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M3_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 3.140e-55
Identity = 180/545 (33.03%), Postives = 213/545 (39.08%), Query Frame = 0
Query:   61 DAIDILRRHPSFK-TLDSGTISELGKLGVTTFLPFGPSGGFPGLRVEDVADAEGGGGLSEDEDTVRAGGHSSPSATDDPVDNPSVELDSFLQDNESGGHEGSPFCDVDGKQVHKQRVLTEFMGSQFGSASRDRLKRVRGPTVGSSG-VPGLPGVGDGDTQGAGIGNTDARSLSVGDPFAMMVMMSPGQYALGLLSCTAAPSEGTRAGSGEVVKGRLMKLKQTRRALEVDERAIIPATNSAPLADSWDHWGELGMHKWELQCKCRLVFPLYPDLVQEPIVVKETVTRTLMGVEPPMQETVEIENVVDRTSFWFSLPDLVAVKGLLVDEVGAFKAWRHLPHQNIARAEANPLPIHEDLFHVEADTVGAAPAGGTGAEKIWCKLCLSQLPRLKMRMNVGGHILKDETLQVSTVCGFCGGSGCRTTIKDLTGKAAPLMHSNCVSAPRKDARHEVVAVNLKSARAGSDTSPCTNLVVKCIFCSLETYVWKYGMADHVARCHKEDTGVEDGTESGQNFKKEYTASESEKTKVLKKFKGG-DKRRDNG-TLP 601
            DA+DILR H S K ++D  TISEL K+GVTTF+ FG  G                   SEDED    G  S+P+ T+D      V+LD+FL   E+G  E S F +VDGKQ+HKQR LTEF+G  F +ASRDRLKRVRG T G SG   G  GVG    + AG+GNTD+R + VGD                                                                                      C                                                                                                    VG  P                                 ++T  VSTVCGFCGG GCR+TI D  G+A PL+HS C SAPR DAR E VA+NL SARA SDTSPCTN+V+KC  CS + Y+W YGM DHV RCH+ +  V  GT     FK+  T SESEK KVL K K G  +RRD G TLP
Sbjct:  918 DAVDILRGHSSCKASVDRETISELQKVGVTTFVSFGGEG-------------------SEDEDDAGEGEQSAPATTEDAEGLAGVDLDAFLHATENGPGEISSFYEVDGKQIHKQRALTEFLGPAFQNASRDRLKRVRGYTAGPSGSATGSRGVGRKGVEAAGVGNTDSRGIVVGD--------------------------------------------------------------------------------------CH---------------------------------------------------------------------------------------------------VGGDPG--------------------------------NKTSPVSTVCGFCGGVGCRSTIHDPPGEARPLVHSTCPSAPRSDARQEAVALNLSSARADSDTSPCTNMVLKCFLCSQDNYIWNYGMFDHVTRCHQANVLVAVGT-GADKFKEACTISESEKAKVLHKVKAGRPRRRDQGNTLP 1225          
BLAST of mRNA_S-dermatodea_contig10701.486.1 vs. uniprot
Match: D7FNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW9_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 3.870e-19
Identity = 55/106 (51.89%), Postives = 69/106 (65.09%), Query Frame = 0
Query:  528 LVVKCIFCSLETYVWKYGMADHVARCHKEDTGVEDGTESGQNFKKEYTASESEKTKVLKKFKGGDKRR---DNGTLPTGARRGVSGNVAPGRGVPGARPSQEEEEE 630
            +V+KC+FCS +TY+WKYGM++HV RCH+ED  V  GT +   FK+ YT SESEK KVL+KFK G  RR    N  LPTGA     GN   GR + G R  ++  EE
Sbjct:    1 MVLKCLFCSQDTYIWKYGMSEHVTRCHREDILVAAGT-TVDRFKEAYTISESEKAKVLQKFKAGRPRRRGQGNEALPTGALGSTEGNGTFGRNMSGTRSLEDMGEE 105          
BLAST of mRNA_S-dermatodea_contig10701.486.1 vs. uniprot
Match: A0A814RY66_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814RY66_9BILA)

HSP 1 Score: 70.5 bits (171), Expect = 4.350e-9
Identity = 42/121 (34.71%), Postives = 64/121 (52.89%), Query Frame = 0
Query:  434 KIWCKLCLSQLPRLKMRMNVGGHILKDETLQVSTVCGFCGGSGCRTTIKDLTGKAAPLMHSNCVSAPRKDARHEVVAVNLKSARAGSDTSPCTNLVVKCIFCSLETYVWKYGMADHVARCH 554
            K+ CK+C S +   KMR++VG HILK++++    +CG+CG  GC   +K  +G+       + V  P  D +   V  +LK+A   S   PCTN  ++CI C  +   W Y +A H    H
Sbjct:  308 KLNCKICDSLVLLEKMRIHVGQHILKNDSVG-EHICGYCGKLGCIIRLKKSSGRG-----KSTVFGPDSDCKF-FVKFSLKAASKVSKNYPCTNRPIECIIC--KAVYWSYNIAIHYKEKH 419          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10701.486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L2E6_9PHAE1.100e-9840.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6M3_9PHAE3.140e-5533.03Reverse transcriptase Ty1/copia-type domain-contai... [more]
D7FNW9_ECTSI3.870e-1951.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A814RY66_9BILA4.350e-934.71Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 625..681

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10701contigS-dermatodea_contig10701:5094..7678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10701.486.1mRNA_S-dermatodea_contig10701.486.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10701 5094..7678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10701.486.1 ID=prot_S-dermatodea_contig10701.486.1|Name=mRNA_S-dermatodea_contig10701.486.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=682bp
LSAAIGVEQVYEKNPGLRRTSTRLNGLDHTSPRQWDDNGPANNTDVRDVD
LSACWYDGSRDAIDILRRHPSFKTLDSGTISELGKLGVTTFLPFGPSGGF
PGLRVEDVADAEGGGGLSEDEDTVRAGGHSSPSATDDPVDNPSVELDSFL
QDNESGGHEGSPFCDVDGKQVHKQRVLTEFMGSQFGSASRDRLKRVRGPT
VGSSGVPGLPGVGDGDTQGAGIGNTDARSLSVGDPFAMMVMMSPGQYALG
LLSCTAAPSEGTRAGSGEVVKGRLMKLKQTRRALEVDERAIIPATNSAPL
ADSWDHWGELGMHKWELQCKCRLVFPLYPDLVQEPIVVKETVTRTLMGVE
PPMQETVEIENVVDRTSFWFSLPDLVAVKGLLVDEVGAFKAWRHLPHQNI
ARAEANPLPIHEDLFHVEADTVGAAPAGGTGAEKIWCKLCLSQLPRLKMR
MNVGGHILKDETLQVSTVCGFCGGSGCRTTIKDLTGKAAPLMHSNCVSAP
RKDARHEVVAVNLKSARAGSDTSPCTNLVVKCIFCSLETYVWKYGMADHV
ARCHKEDTGVEDGTESGQNFKKEYTASESEKTKVLKKFKGGDKRRDNGTL
PTGARRGVSGNVAPGRGVPGARPSQEEEEEESDESEEEEEESNKSEEEGE
ESDKSEEEEDEEEEEENQDDRDEENNDEEAEG
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