prot_S-dermatodea_contig1066.464.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1066.464.1
Unique Nameprot_S-dermatodea_contig1066.464.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length142
Homology
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BLAST of mRNA_S-dermatodea_contig1066.464.1 vs. uniprot
Match: D7FYP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP4_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 6.650e-17
Identity = 49/112 (43.75%), Postives = 61/112 (54.46%), Query Frame = 0 
Query:    8 RRSRLDEGPGAYDDVSLSTLFAHLMKLADDEAEATCPGSASGTTDPXXXXXXXXYFSSSALADNDTLFKRHSATVRRWMKHAVEDLHVDALIVVSATTLALQYLRHRHRFPS 119
            RRS  D   G    + L TLF+HLMKL  DEA A    +A   T             + A  +   LF R S  VR WMK A+ED H+DA +V SATTLAL++L+ RH +PS
Sbjct:   33 RRSNGDMDDGGV--IQLPTLFSHLMKLGKDEAGAVAEAAALAATAGGKSNVSLPLLLTPAPTEKAVLFARDSGRVRGWMKSALEDRHIDAQVVASATTLALRWLQRRHMYPS 142
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BLAST of mRNA_S-dermatodea_contig1066.464.1 vs. uniprot
Match: A0A6H5K008_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K008_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 5.300e-13
Identity = 43/114 (37.72%), Postives = 59/114 (51.75%), Query Frame = 0 
Query:    6 RRRRSRLDEGPGAYDDVSLSTLFAHLMKLADDEAEATCPGSASGTTDPXXXXXXXXYFSSSALADNDTLFKRHSATVRRWMKHAVEDLHVDALIVVSATTLALQYLRHRHRFPS 119
            RR    +D+G      + L+TLF+HLMKL  DEA A    +                  +    +   LF   S  VR WMK A+E+ H+DA +V SATTLAL++L+ RH +PS
Sbjct:   21 RRPNGNMDDG----GVIQLTTLFSHLMKLGRDEAGAVAEAATFAAKAGGKSNISLPLLLTPPPTEKAVLFALDSGRVRGWMKSALENRHIDAQVVTSATTLALRWLQRRHLYPS 130
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1066.464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYP4_ECTSI6.650e-1743.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K008_9PHAE5.300e-1337.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1066contigS-dermatodea_contig1066:10544..11560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1066.464.1mRNA_S-dermatodea_contig1066.464.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1066 10514..11560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1066.464.1 ID=prot_S-dermatodea_contig1066.464.1|Name=mRNA_S-dermatodea_contig1066.464.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=142bp
MPTAHRRRRSRLDEGPGAYDDVSLSTLFAHLMKLADDEAEATCPGSASGT
TDPPTTPPSPPYFSSSALADNDTLFKRHSATVRRWMKHAVEDLHVDALIV
VSATTLALQYLRHRHRFPSSRGTSIHHRRLADAWAHARSYLP
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