prot_S-dermatodea_contig10659.461.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10659.461.1
Unique Nameprot_S-dermatodea_contig10659.461.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length293
Homology
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BLAST of mRNA_S-dermatodea_contig10659.461.1 vs. uniprot
Match: D7FK75_ECTSI (Ubiquitin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK75_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 1.350e-88
Identity = 144/199 (72.36%), Postives = 163/199 (81.91%), Query Frame = 0 
Query:   85 EWEPPWSGVPRPSELVPPSVFQACWLENRLFLMDKNVFSAEYLDWVCDLTALVPPPKIPYLSRPHVHDTGAKGDVDDVDEVESSAAKVALFLALDTIARAKDKGRLSQLMLYVRSWFRASPSVCRWALVQMTTNNYWQHTMLLQCNLHGVRHEFLQLCVELVRCYAPVERHLYYIEHPAIGEHEYLAAVRQREERERQR 283
            EWEPPW GVPRPSELVPPS+FQACW+ENRLFLMDKNVFS+EYLDWVCDLTALVPPP++P                DDVDEVE S AKVALFLALDT+ARAKDK RLSQLM Y + WFR+SP+VCRWAL QMT NNYWQHTMLL+C+L GVR EFL LCV+LVR YAP ERH YY E P+IG + YLAAVRQ+++R+ +R
Sbjct: 1970 EWEPPWMGVPRPSELVPPSIFQACWMENRLFLMDKNVFSSEYLDWVCDLTALVPPPRVPPSGSGSTEGARIAAGGDDVDEVELSTAKVALFLALDTVARAKDKERLSQLMGYAKRWFRSSPTVCRWALEQMTANNYWQHTMLLRCSLQGVRFEFLHLCVDLVRSYAPYERHKYYEEDPSIGANLYLAAVRQQQQRKGER 2168
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BLAST of mRNA_S-dermatodea_contig10659.461.1 vs. uniprot
Match: A0A6H5KF55_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF55_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 7.790e-81
Identity = 142/204 (69.61%), Postives = 155/204 (75.98%), Query Frame = 0 
Query:   74 GREAAVSP--REKEWEPPWSGVPRPSELVPPSVFQACWLENRLFLMDKNVFSAEYLDWVCDLTALVPPPKIPYLSRPHVHDTGAKGDVDDVDEVESSAAKVALFLALDTIARAKDKGRLSQLMLYVRSWFRASPSVCRWALVQMTTNNYWQHTMLLQCNLHGVRHEFLQLCVELVRCYAPVERHLYYIEHPAIGEHEYLAAVRQ 275
            GR  AVSP     EWEPPW GVPRPSELVPPS+FQACW+ENRLFLMDKNVFS+EYLDWVCDLTALVPPP++P                DDVDEVE S AKVALFLALDT+ARAKDK RLSQLM Y + WFRASP+        MT NNYWQHTMLL+C+L GVR EFL LCV+LVR YAP ERH YY E P+IG + YLAAVRQ
Sbjct:  278 GRGEAVSPGGAGDEWEPPWMGVPRPSELVPPSIFQACWMENRLFLMDKNVFSSEYLDWVCDLTALVPPPRVPPSGSGSAEGARIATGGDDVDEVELSTAKVALFLALDTVARAKDKERLSQLMGYAKRWFRASPT--------MTANNYWQHTMLLRCSLQGVRFEFLHLCVDLVRSYAPYERHKYYEEDPSIGANLYLAAVRQ 473
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10659.461.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK75_ECTSI1.350e-8872.36Ubiquitin domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KF55_9PHAE7.790e-8169.61USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10659contigS-dermatodea_contig10659:5745..7572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10659.461.1mRNA_S-dermatodea_contig10659.461.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10659 5743..7572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10659.461.1 ID=prot_S-dermatodea_contig10659.461.1|Name=mRNA_S-dermatodea_contig10659.461.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=293bp
NPAPFPRTSHKPPPPPPPCDNGASADTVALPAGKSSAASVAGMESTETVA
AAEGARNSAEAQGKQDGSRGLVEGREAAVSPREKEWEPPWSGVPRPSELV
PPSVFQACWLENRLFLMDKNVFSAEYLDWVCDLTALVPPPKIPYLSRPHV
HDTGAKGDVDDVDEVESSAAKVALFLALDTIARAKDKGRLSQLMLYVRSW
FRASPSVCRWALVQMTTNNYWQHTMLLQCNLHGVRHEFLQLCVELVRCYA
PVERHLYYIEHPAIGEHEYLAAVRQREERERQRQGLRPEAGAA
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