prot_S-dermatodea_contig1062.433.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1062.433.1
Unique Nameprot_S-dermatodea_contig1062.433.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length122
Homology
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BLAST of mRNA_S-dermatodea_contig1062.433.1 vs. uniprot
Match: D8LK29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK29_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.590e-15
Identity = 43/75 (57.33%), Postives = 50/75 (66.67%), Query Frame = 0 
Query:   33 SANRPGFSSYDETHQIFTHVLRDWTSEGRSVRAAVYDPLIQALDAYVGWQEVEATGAAATAPSGTGGYGDGNSMA 107
            S  R GF SYDETHQIFTH+LRDWTSEG SVRAAVY PL++ALD   G QE         A S T G G+ + ++
Sbjct:  242 SKTRTGFHSYDETHQIFTHILRDWTSEGDSVRAAVYSPLLKALDDRFGRQE---------AASSTSGRGNSDGLS 307
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BLAST of mRNA_S-dermatodea_contig1062.433.1 vs. uniprot
Match: A0A6H5JII3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII3_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.640e-6
Identity = 31/58 (53.45%), Postives = 35/58 (60.34%), Query Frame = 0 
Query:   48 IFTHVLRDWTSEGRSVRAAVYDPLIQALDAYVGWQEVEATGAAATAPSGTGGYGDGNS 105
            IFTH+LRDWTSEG +VRAAVY PL++ALD     QE           S  GG GD  S
Sbjct:    2 IFTHILRDWTSEGAAVRAAVYSPLLKALDDRFSRQE---------GASSAGGRGDSYS 50
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1062.433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LK29_ECTSI1.590e-1557.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JII3_9PHAE1.640e-653.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012901N2227-likePFAMPF07942N2227coord: 37..94
e-value: 7.7E-6
score: 25.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1062contigS-dermatodea_contig1062:9756..10725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1062.433.1mRNA_S-dermatodea_contig1062.433.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1062 9756..10727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1062.433.1 ID=prot_S-dermatodea_contig1062.433.1|Name=mRNA_S-dermatodea_contig1062.433.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=122bp
IVQGPAATVADALEELSKGKSREWGGGEQQNSSANRPGFSSYDETHQIFT
HVLRDWTSEGRSVRAAVYDPLIQALDAYVGWQEVEATGAAATAPSGTGGY
GDGNSMAGEWKRAERDQPRRKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012901N2227