prot_S-dermatodea_contig10614.427.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10614.427.1
Unique Nameprot_S-dermatodea_contig10614.427.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length176
Homology
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BLAST of mRNA_S-dermatodea_contig10614.427.1 vs. uniprot
Match: A0A6H5L0M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M6_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 8.190e-11
Identity = 63/191 (32.98%), Postives = 93/191 (48.69%), Query Frame = 0 
Query:    2 SGRERDILSLIRSGAVEGAFLLSKRGAPSDAVKGRNSMPENPRSSSS---RAQVPAPGTCHISIS-SASIGGTANRSMSAPARQRRVRNQVGGNQDRPLYAIVSGNFIDKLGSIVLDLTTP-----LIVTPQMHLESLGILGRVPNERVTP------------RYPDRFALLELSVEPPVDIVVGSRYLVL 171
            S R+R+IL+LIR+G+V   FLLS+R   +    G+     +  + +    R   P+ G    S S S S GG + RS ++ A        VG   DRPLYA+VS +F+   GS+V  L+ P      I T ++  E +    + P    T             R   RF LLEL VE PV++V+G+R  ++
Sbjct:  630 STRQREILALIRAGSVGETFLLSRRRHSTSGAAGKKRQLASTATGTMTPRRHSEPSGGGAINSFSASTSRGGVSLRSTTSSA--------VGKQFDRPLYAVVSEDFVSGAGSMVRTLSAPQATPSAISTSRVAQEPIAFHSKRPEVATTAAATAARASTAVSRRGGRFHLLELPVEGPVNMVIGNRSAIV 812
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10614.427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L0M6_9PHAE8.190e-1132.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10614contigS-dermatodea_contig10614:4590..6909 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10614.427.1mRNA_S-dermatodea_contig10614.427.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10614 3789..6909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10614.427.1 ID=prot_S-dermatodea_contig10614.427.1|Name=mRNA_S-dermatodea_contig10614.427.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=176bp
MSGRERDILSLIRSGAVEGAFLLSKRGAPSDAVKGRNSMPENPRSSSSRA
QVPAPGTCHISISSASIGGTANRSMSAPARQRRVRNQVGGNQDRPLYAIV
SGNFIDKLGSIVLDLTTPLIVTPQMHLESLGILGRVPNERVTPRYPDRFA
LLELSVEPPVDIVVGSRYLVLRRPS*
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