prot_S-dermatodea_contig10588.409.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10588.409.1
Unique Nameprot_S-dermatodea_contig10588.409.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length177
Homology
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BLAST of mRNA_S-dermatodea_contig10588.409.1 vs. uniprot
Match: A0A6H5JW74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW74_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 3.630e-42
Identity = 85/177 (48.02%), Postives = 118/177 (66.67%), Query Frame = 0 
Query:    2 CFNLFGGCAYHIHAEKHKSRFALVLPGLHDIDLRGSVTTTS-EESYELMVQPFDRSSIEHLFGHLFKAHAVNPLEAPGVLPYAVKNVCSVMRERLQHANLPLYYYKHITDSSHPDVVRVVDAAEAEPSNSNVLYQEVICVIFLLVTVDEGSMLKIQVEVAAQHRNVVGFDYVFEVVF 177
            CFN+FGGCAY +HA   KSRFA +LPGLHD+D+RGSV     ++      QPF+R SI+ LF    +  A NPL+ PGVL + +K +C+++R RL  ++ PL Y +HI D+  PD V V+ A  +      VL++EV+   FLLV VDE  +LK+QVEV A+  +VVG D+VFE++F
Sbjct:   79 CFNIFGGCAYQVHAMNDKSRFAHILPGLHDVDVRGSVKLVGGKDGKGRCAQPFERISIDQLF----ETQAPNPLDEPGVLAHVLKKICTIVRRRLLRSDPPLRYDRHINDNPFPDRVDVLHAPVSSSRRPGVLHEEVVGDHFLLVIVDEVDLLKVQVEVRAKLGSVVGVDHVFELIF 251
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10588.409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JW74_9PHAE3.630e-4248.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10588contigS-dermatodea_contig10588:578..1108 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10588.409.1mRNA_S-dermatodea_contig10588.409.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10588 578..1108 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10588.409.1 ID=prot_S-dermatodea_contig10588.409.1|Name=mRNA_S-dermatodea_contig10588.409.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=177bp
MCFNLFGGCAYHIHAEKHKSRFALVLPGLHDIDLRGSVTTTSEESYELMV
QPFDRSSIEHLFGHLFKAHAVNPLEAPGVLPYAVKNVCSVMRERLQHANL
PLYYYKHITDSSHPDVVRVVDAAEAEPSNSNVLYQEVICVIFLLVTVDEG
SMLKIQVEVAAQHRNVVGFDYVFEVVF
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