prot_S-dermatodea_contig10583.407.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10583.407.1
Unique Nameprot_S-dermatodea_contig10583.407.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length288
Homology
BLAST of mRNA_S-dermatodea_contig10583.407.1 vs. uniprot
Match: D8LF93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF93_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 5.290e-107
Identity = 177/238 (74.37%), Postives = 202/238 (84.87%), Query Frame = 0
Query:   52 EAGVSLALEVLQAAATLAQEFLSDKDRVAPRALLETAVQLHGILFSLQGLQGTALQGVIAKVCEMWWTQERPGGEHLVPQLLPLMLVRSLDDGAKEADVKRV--MRTGFLLLDFEDESSHSLRALLFRAFISPLYLKSSEGKRLLAYFFGLHPSLVLHFHDVMKAQMPGGKRSVLAAYGEVYFRVWRGAEGTYLERVEMHCLQDLMHACIHASTPKMHGNLLVVLDALHSQKQVRFYD 287
            +A VSLA+EVL A+ATLA EFL+DK+RVAPRAL++TAV LH I+ SLQGLQG AL+ VIAKVCEMWWTQ+RPG EHLV  L+P+MLVRSL   AKEADVKR+  ++   LLLDFEDESS SLRALL R F+SP+YLK SEGKRLLA FFGLHPSLV   H VMKAQMPG K++VLAAYGEVYFRVWRG EG YLE+VEM CLQDLMHACIHASTPKMH N+L+VL+ LHSQK+V+  D
Sbjct:  161 QASVSLAMEVLYASATLAHEFLADKERVAPRALVDTAVYLHDIVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGTEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVD 398          
BLAST of mRNA_S-dermatodea_contig10583.407.1 vs. uniprot
Match: A0A6H5JG90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG90_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 3.810e-105
Identity = 175/234 (74.79%), Postives = 198/234 (84.62%), Query Frame = 0
Query:   56 SLALEVLQAAATLAQEFLSDKDRVAPRALLETAVQLHGILFSLQGLQGTALQGVIAKVCEMWWTQERPGGEHLVPQLLPLMLVRSLDDGAKEADVKRV--MRTGFLLLDFEDESSHSLRALLFRAFISPLYLKSSEGKRLLAYFFGLHPSLVLHFHDVMKAQMPGGKRSVLAAYGEVYFRVWRGAEGTYLERVEMHCLQDLMHACIHASTPKMHGNLLVVLDALHSQKQVRFYD 287
            S  ++VL AAATLA EFL+DK+RVAPRAL++TAV LH I+ SLQGLQG AL+ VIAKVCEMWWTQ+RPG EHLV  L+P+MLVRSL   AKEADVKR+  ++   LLLDFEDESS SLRALL R F+SP+YLKSSEGKRLLA FFGLHPSLV   H VMKAQMPG K++VLAAYGEVYFRVWRGAEG YLE+VEM CLQDLMHACIHASTPKMH N+LVVL+ LHSQK+ +  D
Sbjct:   38 SRQVQVLYAAATLAHEFLADKERVAPRALVDTAVYLHDIVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHAVKGALLLLDFEDESSDSLRALLLRTFMSPVYLKSSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILVVLEGLHSQKKAKGVD 271          
BLAST of mRNA_S-dermatodea_contig10583.407.1 vs. uniprot
Match: W7TM42_9STRA (Condensin-2 complex subunit g2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM42_9STRA)

HSP 1 Score: 228 bits (580), Expect = 4.580e-64
Identity = 105/216 (48.61%), Postives = 148/216 (68.52%), Query Frame = 0
Query:   74 SDKDRVAPRALLETAVQLHGILFSLQGLQGTALQGVIAKVCEMWWTQERPGGEHLVPQLLPLMLVRSLDDGAKEADVKRV--MRTGFLLLDFEDESSHSLRALLFRAFISPLYLKSSEGKRLLAYFFGLHPSLVLHFHDVMKAQMPGGKRSVLAAYGEVYFRVWRGAEGTYLERVEMHCLQDLMHACIHASTPKMHGNLLVVLDALHSQKQVRFYD 287
            S  D   P  LL+  V LH +LF L G+ G ALQG I +VCE WW Q R G E LV Q +P ++ RSL++ A+EA VKRV  +R   LLLD+E+E++   R LL + F+ P YLKS++G+RLL + FGLHPSLV+  H+ +K+Q+P  K+ ++ AYG+VYFR WR AEG YLE +E  C+QDLMHA +H ++P ++  L ++L + H+ K++R  D
Sbjct:  135 SSADSATPEGLLQVMVALHDVLFQLSGIDGEALQGAIVRVCEQWWKQGRGGAEFLVAQTVPYLVARSLEEDAREALVKRVYALRGALLLLDYEEEATGPFRELLLQCFLKPTYLKSADGRRLLTFLFGLHPSLVVDIHETVKSQLPYAKKKLVQAYGDVYFRAWRAAEGPYLEAIETGCVQDLMHAAVHCASPSLYATLRLLLQSFHANKRLREVD 350          
BLAST of mRNA_S-dermatodea_contig10583.407.1 vs. uniprot
Match: A0A835YRM8_9STRA (Condensin II non structural maintenance of chromosomes subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM8_9STRA)

HSP 1 Score: 219 bits (557), Expect = 5.680e-61
Identity = 118/250 (47.20%), Postives = 153/250 (61.20%), Query Frame = 0
Query:   52 EAGVSLALEVLQAAATLAQEFLSDKDRVAPRALLETAVQLHGILFSLQGLQGTALQGVIAKVCEMWWTQERPGGEHLVPQLLPLMLVRSLDDGAKEADVKRVM--RTGFLLLDFEDESSHSLRALLFRAFISPLYLKSSEGKRLLAYFFGLHPSLVLHFHDVMKAQMPGGKRSVLAAYGEVYFRVWRGAEGT------------YLERVEMHCLQDLMHACIHASTPKMHGNLLVVLDALHSQKQVRFYD 287
            +A VS++LE++ A  TLA  FL+DK R AP +LL T   LHGIL  LQG +G ALQ  IA+ CE WW  ERPGGEHLV  LLP +L+R+LD  A++ADV+R+   R   LLLD+ED  +   RALL RAF++P +L+   G+R LA  FGLHP+     H V+ AQ+P  +R+VLAAYGEVYFR WRGA+G             Y   +E  C+Q LM                 VLDA H+Q++ +  D
Sbjct:  114 DAVVSISLELMDAITTLAGLFLADKKRAAPPSLLSTMAALHGILLYLQGAEGAALQTAIARACEAWWRAERPGGEHLVACLLPYLLLRALDPAARDADVRRLCDARGALLLLDWEDADAEGTRALLLRAFLAPAFLRGDAGRRFLASVFGLHPAFAARIHAVVSAQLPRARRAVLAAYGEVYFRAWRGADGXXXXXXXXXXXXXYAAEIEGACMQPLMXXXXXXXXXXXXXXARGVLDAFHAQRRQKGVD 363          
BLAST of mRNA_S-dermatodea_contig10583.407.1 vs. uniprot
Match: L8GEA4_ACACA (HEAT repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GEA4_ACACA)

HSP 1 Score: 200 bits (509), Expect = 1.450e-54
Identity = 100/237 (42.19%), Postives = 151/237 (63.71%), Query Frame = 0
Query:   58 ALEVLQAAATLAQEFLSDKDRVAPRALLETAVQLHGILFSLQGLQGTA----LQGVIAKVCEMWWTQERPGGEHLVPQLLPLMLVRSLDDGAKEADVKRV--MRTGFLLLDFEDESSHSLRALLFRAFISPLYLKSSEGKRLLAYFFGLHPSLVLHFHDVMKAQMPGGKRSVLAAYGEVYFRVWRGAEGTYLERVEMHCLQDLMHACIHASTPKMHGNLLVVLDALHSQKQVRFYDQ 288
            ALE L+A A LA  F++ KDR+AP +L ++   LHGIL  +  ++G      L   IA++CE WW Q+R   E LVP  +  +++++L++GAK A +KR+   R+  LLLDF+D+SS  L+ LL R FI P++L++++GK+ L Y FGLHP  +   HD +K Q+P   +S+L AYGEVYF+ W+ A+G YL ++E  CLQDL+   +H     +   L  VL  +H QK+ +  D+
Sbjct:  150 ALEYLRAVALLASLFIASKDRIAPDSLFDSVALLHGILLDVLAIKGAGHALLLHNEIAQLCETWWKQDRTQKEALVPLTIFYLVLQTLEEGAKTATIKRLYDFRSALLLLDFQDDSSTQLKGLLLRCFIHPMFLRAADGKKFLVYLFGLHPPYIDAIHDTIKGQLPACPKSLLEAYGEVYFKAWKVAQGPYLLKLEYTCLQDLISCAVHVQNEAVVSGLRKVLRHIHEQKKQKGVDE 386          
BLAST of mRNA_S-dermatodea_contig10583.407.1 vs. uniprot
Match: A0A7S1CM40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM40_9STRA)

HSP 1 Score: 188 bits (478), Expect = 3.970e-53
Identity = 100/200 (50.00%), Postives = 128/200 (64.00%), Query Frame = 0
Query:   91 LHGILFSLQGLQGTALQGVIAKVCEMWWTQERPGGEHLVPQLLPLMLVRSLDDGAKEADVKRV--MRTGFLLLDFEDESSHSLRALLFRAFISPLYLKSSEGKRLLAYFFGLHPSLVLHFHDVMKAQMPGGKRSVLAAYGEVYFRVWRGAEGTYLERVEMHCLQDLMHACIHASTPKMHGNLLVVLDALHSQKQVRFYDQ 288
            +H +LF L   +  A Q  I K CE WWTQ R G E LV QLLP +L+RSL++GA   DVKRV  +R+ F LLDFEDES  SL+ LL R  I PLY+  ++G+R LA+ F LHP+ V   HD +K QMP  +R V AAYGEVYF+ WR +EG    ++E  C+QDLMH  +HAS P M      VL A  ++K+ R  D+
Sbjct:    3 MHNVLFYLMVREAAACQMSIMKACERWWTQARAGREGLVVQLLPTLLMRSLEEGAAPGDVKRVYAVRSAFELLDFEDESIDSLKELLLRCVIHPLYVSRADGRRFLAFLFSLHPTFVDDLHDTIKNQMPSTRR-VHAAYGEVYFKAWRNSEGELTLKIERGCVQDLMHRGVHASLPAMFAATRQVLAAFINEKRSRGVDE 201          
BLAST of mRNA_S-dermatodea_contig10583.407.1 vs. uniprot
Match: UPI000F554239 (condensin-2 complex subunit G2-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F554239)

HSP 1 Score: 180 bits (457), Expect = 1.270e-47
Identity = 102/222 (45.95%), Postives = 139/222 (62.61%), Query Frame = 0
Query:   73 LSDKDRVAPRALLETAVQLHGILFSL-QGLQGTALQGVIAKVCEMWWTQERPGGEHLVPQLLPLMLVRSLDDGAKEADVKRV--MRTGFLLLDFEDESSHSLRALLFRAFISPLYLKSSEGKRLLAYFFGLHPSLVLHFHDVMKAQMPGGKRSVLAAYGEVYFRVWRGAEGTYLERVEMHCLQDLMHACIHAS---TPKMHGNLLVVLDALHSQKQVRFYDQ 288
            + +K    P A LETA  LHG+L SL +G +  +LQ  IA++CE+W+  E  G E L+ Q  P +++RSL  G   +DVKRV  +R   LL+DF+D+SS SL+ LL +  I P YLK  EG+R L+Y FGL+P L   FH  +K Q+P    +VL+ YGEVYFR WR A G YL+ +E +C+QDLM A +HA    T  M   L  VL+ +H QK+ R  D+
Sbjct:  105 MPEKPTHVPSAFLETAAILHGLLMSLPEGSE--SLQNDIAQLCELWFLNELEGKEELITQTFPYLIIRSLGRGLV-SDVKRVWGLRQCLLLMDFDDDSSESLKQLLHQCMIHPTYLKLEEGRRFLSYSFGLNPGLAKEFHKTIKNQIPYCTMNVLSLYGEVYFRAWRVASGAYLKVLEENCIQDLMFAAVHAQRTGTKSMASRLRKVLEYIHQQKKQRGVDE 323          
BLAST of mRNA_S-dermatodea_contig10583.407.1 vs. uniprot
Match: A0A2B4SM72_STYPI (Condensin-2 complex subunit G2 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SM72_STYPI)

HSP 1 Score: 174 bits (441), Expect = 1.660e-45
Identity = 103/236 (43.64%), Postives = 143/236 (60.59%), Query Frame = 0
Query:   59 LEVLQAAATLAQEFLSDKDRVAPRALLETAVQLHGILFSL-QGLQGTALQGVIAKVCEMWWTQERPGGEHLVPQLLPLMLVRSLDDGAKEADVKRV--MRTGFLLLDFEDESSHSLRALLFRAFISPLYLKSSEGKRLLAYFFGLHPSLVLHFHDVMKAQMPGGKRSVLAAYGEVYFRVWRGAEGTYLERVEMHCLQDLMHACIHAS---TPKMHGNLLVVLDALHSQKQVRFYDQ 288
            LE +   A  A   + +K      A LETAV LHG+L SL +G +  +LQ  IA++CE+W+  E  G E L+ Q  P ++++SL  G   +DV RV  +R    L+DF+D+SS SL+ LL +  I P+YLK  EG+R L+Y FGL+P L   FH  +K Q+P    +VL+ YGEVYFR WR A G YL+ +E +C+QDLM A +HA    T  M   L  VL+ +H QK+ R  D+
Sbjct:   87 LEGVTKVALCALAVILEKSTHVSSAFLETAVILHGLLMSLPEGYE--SLQNDIAQLCELWFLNELEGKEELITQAFPYLIIKSLGRGII-SDVNRVWSLRQCLHLMDFDDDSSESLKQLLHQCMIHPVYLKLEEGRRFLSYAFGLNPGLSKEFHRTIKNQIPYCSMNVLSLYGEVYFRAWRVASGAYLKVLEENCIQDLMFAAVHAQRTGTQSMASRLRKVLEYIHQQKKQRGVDE 319          
BLAST of mRNA_S-dermatodea_contig10583.407.1 vs. uniprot
Match: A0A3M6U8W1_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6U8W1_POCDA)

HSP 1 Score: 163 bits (413), Expect = 4.740e-45
Identity = 88/189 (46.56%), Postives = 120/189 (63.49%), Query Frame = 0
Query:  105 ALQGVIAKVCEMWWTQERPGGEHLVPQLLPLMLVRSLDDGAKEADVKRV--MRTGFLLLDFEDESSHSLRALLFRAFISPLYLKSSEGKRLLAYFFGLHPSLVLHFHDVMKAQMPGGKRSVLAAYGEVYFRVWRGAEGTYLERVEMHCLQDLMHACIHAS---TPKMHGNLLVVLDALHSQKQVRFYDQ 288
            +LQ  IA++CE+W+  E  G E L+ Q  P +++RSL  G   +DVKRV  +R   LL+DF+D+SS SL+ LL +  I P YLK  EG+R L+Y FGL+P L   FH  +K Q+P    +VL+ YGEVYFR WR A G YL+ +E +C+QDLM A +HA    T  M   L  VL+ +H QK+ R  D+
Sbjct:    9 SLQNDIAQLCELWFLNELEGKEELITQTFPYLIIRSLGRGLV-SDVKRVWGLRQCLLLMDFDDDSSESLKQLLHQCMIHPTYLKLEEGRRFLSYSFGLNPGLAKEFHKTIKNQIPYCTMNVLSLYGEVYFRAWRVASGAYLKVLEENCIQDLMFAAVHAQRTGTKSMASRLRKVLEYIHQQKKQRGVDE 196          
BLAST of mRNA_S-dermatodea_contig10583.407.1 vs. uniprot
Match: A0A0L0D587_THETB (Condensin-2 complex subunit G2 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D587_THETB)

HSP 1 Score: 168 bits (426), Expect = 1.770e-43
Identity = 96/227 (42.29%), Postives = 129/227 (56.83%), Query Frame = 0
Query:   59 LEVLQAAATLAQEFLSDKDRVAPRALLETAVQLHGILFSLQG-LQGTALQGVIAKVCEMWWTQERPGGEHLVPQLLPLMLVRSLDDGAKEADVKRV--MRTGFLLLDFEDESSHSLRALLFRAFISPLYLKSSEGKRLLAYFFGLHPSLVLHFHDVMKAQMPGGKRSVLAAYGEVYFRVWRGAEGTYLERVEMHCLQDLMHACIHASTPKMHGNLLVVLDALHSQKQ 282
            L VL   A + Q  L+D+ R A +++   A  LH I+  L   L G AL+  IA  CE WWT  +PG E LVPQ L  +LVR L  G    DVKRV  MRT F LLDFE ES+ S++ L+ R   SPL+L ++ G + LA+ F L        H  MK QMP  K  +L +YGEVYF+ W+ A     + +E + +Q+LM A +HAS+  +   L  VL A H +K+
Sbjct:   61 LRVLSGVAFVMQRVLADEARKASKSMFAVASLLHDIILVLPNTLDGDALKNEIALFCETWWTHAKPGREALVPQTLCYLLVRGLSPGGTPGDVKRVAAMRTAFELLDFEHESTESIKDLILRTLFSPLFLGAAAGIKFLAHMFNLSGPFASEMHVTMKGQMPMAKLKMLNSYGEVYFKAWKTAGAASRDAIEYNFVQELMSAGVHASSKGLAAALRAVLGAFHERKR 287          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10583.407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF93_ECTSI5.290e-10774.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG90_9PHAE3.810e-10574.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TM42_9STRA4.580e-6448.61Condensin-2 complex subunit g2 n=2 Tax=Monodopsida... [more]
A0A835YRM8_9STRA5.680e-6147.20Condensin II non structural maintenance of chromos... [more]
L8GEA4_ACACA1.450e-5442.19HEAT repeat domain containing protein n=1 Tax=Acan... [more]
A0A7S1CM40_9STRA3.970e-5350.00Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
UPI000F5542391.270e-4745.95condensin-2 complex subunit G2-like n=1 Tax=Pocill... [more]
A0A2B4SM72_STYPI1.660e-4543.64Condensin-2 complex subunit G2 n=2 Tax=Stylophora ... [more]
A0A3M6U8W1_POCDA4.740e-4546.56Uncharacterized protein n=1 Tax=Pocillopora damico... [more]
A0A0L0D587_THETB1.770e-4342.29Condensin-2 complex subunit G2 n=1 Tax=Thecamonas ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024741Condensin-2 complex subunit G2PFAMPF12422Condensin2nSMCcoord: 178..282
e-value: 7.0E-29
score: 100.9
NoneNo IPR availablePANTHERPTHR16199FAMILY NOT NAMEDcoord: 55..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10583contigS-dermatodea_contig10583:113..7769 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10583.407.1mRNA_S-dermatodea_contig10583.407.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10583 113..7769 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10583.407.1 ID=prot_S-dermatodea_contig10583.407.1|Name=mRNA_S-dermatodea_contig10583.407.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=288bp
PERPSTPPSAGLEPPPRRPRRGGGGGGGATAGEGVGGGKFGENCAGGNGR
GEAGVSLALEVLQAAATLAQEFLSDKDRVAPRALLETAVQLHGILFSLQG
LQGTALQGVIAKVCEMWWTQERPGGEHLVPQLLPLMLVRSLDDGAKEADV
KRVMRTGFLLLDFEDESSHSLRALLFRAFISPLYLKSSEGKRLLAYFFGL
HPSLVLHFHDVMKAQMPGGKRSVLAAYGEVYFRVWRGAEGTYLERVEMHC
LQDLMHACIHASTPKMHGNLLVVLDALHSQKQVRFYDQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024741Condensin2_G2