prot_S-dermatodea_contig10423.309.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10423.309.1
Unique Nameprot_S-dermatodea_contig10423.309.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length81
Homology
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BLAST of mRNA_S-dermatodea_contig10423.309.1 vs. uniprot
Match: D8LB77_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB77_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 4.170e-29
Identity = 52/74 (70.27%), Postives = 64/74 (86.49%), Query Frame = 0 
Query:    8 VGQEVSVEVASKTFDRKAKVAQRHSESMLMNGISVERTDLAPTPGLIMHGTGDKSPALWKMYVRAPYVVQNGLA 81
            VG EVSVE++  TFDR  +V +RHS+ ML+NG+SVER DLAPTPGL+MHG+GD +PALW++Y RAPYVVQNGLA
Sbjct: 1288 VGDEVSVEISPNTFDRNKRVVERHSQGMLVNGVSVERADLAPTPGLVMHGSGDDAPALWRLYTRAPYVVQNGLA 1361
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10423.309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB77_ECTSI4.170e-2970.27SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10423contigS-dermatodea_contig10423:7106..7825 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10423.309.1mRNA_S-dermatodea_contig10423.309.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10423 7106..7825 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10423.309.1 ID=prot_S-dermatodea_contig10423.309.1|Name=mRNA_S-dermatodea_contig10423.309.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=81bp
PGVEVEDVGQEVSVEVASKTFDRKAKVAQRHSESMLMNGISVERTDLAPT
PGLIMHGTGDKSPALWKMYVRAPYVVQNGLA
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