prot_S-dermatodea_contig10423.308.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10423.308.1
Unique Nameprot_S-dermatodea_contig10423.308.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length292
Homology
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BLAST of mRNA_S-dermatodea_contig10423.308.1 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 1.170e-55
Identity = 120/224 (53.57%), Postives = 151/224 (67.41%), Query Frame = 0 
Query:    1 MRINMSDPRGAATLSGEMTAKSHFVLNATTGLTSLACTIFDTQDYANTRYSTTSVYTELRYGTGEDDDGSRLLTIENHLGVPVTVSLERTDDAGEDALDTSSSRGLHFGRKSKNSP---PQSSGKTISTS-TKLAASLYAKKGKAEANPQETRAGMAGTPADRISLGELLVPDAKKSLQTATVTVAVKGFQPLSGVPLDLLGRGTHVFKMTRYEAQSPSMHKKR 220
            M I MSDPRG +T  G+M A  HFVLN TTGLTSLAC+I +++DYA TRYSTTSVYTELR G  + DDG+RLLTIENHLGVPV V+LE  DDA       +  +G  FG K    P   P++     S +  ++A++LY          Q+   G  G P+DR+S+GEL VP+AK +L TATVT+  KGF+P++GVPLDLLGRGTHV++MTR    SP  H +R
Sbjct: 2056 MSIQMSDPRGESTPRGQMIADQHFVLNVTTGLTSLACSIMESRDYAKTRYSTTSVYTELRDGN-DGDDGTRLLTIENHLGVPVRVTLE--DDASSSGA-AAREKGRPFGLKKAGRPAAAPEAPADATSGNFCRIASTLY---------DQQEGGGEDGPPSDRVSVGELTVPNAKMALPTATVTIKAKGFEPVTGVPLDLLGRGTHVYRMTRSGPTSPCPHTRR 2266
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BLAST of mRNA_S-dermatodea_contig10423.308.1 vs. uniprot
Match: A0A6H5K9P2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9P2_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.130e-53
Identity = 114/213 (53.52%), Postives = 143/213 (67.14%), Query Frame = 0 
Query:    1 MRINMSDPRGAATLSGEMTAKSHFVLNATTGLTSLACTIFDTQDYANTRYSTTSVYTELRYGTGEDDDGSRLLTIENHLGVPVTVSLERTDDAGEDALDTSSSRGLHFGRKSKNSPPQSSGKTISTST-----KLAASLYAKKGKAEANPQETRAGMAGTPADRISLGELLVPDAKKSLQTATVTVAVKGFQPLSGVPLDLLGRGTHVFKMTR 208
            M I MSDPRG +T  G+M A  HFVLN TTGLTSLAC+I +++DYA TRYSTTSVYTELR G  + DDG RLLTIENHLGVPV V+LE  DD        +  +G  FG K    P  +     + +T     ++A++LY          Q+   G  G P+DR+S+GEL VP+AK +L TATVT+  KGF+P++GVPLDLLGRGTHV++MTR
Sbjct:  519 MSIKMSDPRGESTPRGQMIADQHFVLNVTTGLTSLACSIMESRDYAKTRYSTTSVYTELRDGN-DGDDGMRLLTIENHLGVPVRVTLE--DDTSSSGA-AAHEKGRPFGSKKTGRPAAAPPAAPADATSGNFCRIASTLY---------DQQGGGGEDGPPSDRVSVGELTVPNAKMALPTATVTIKAKGFEPVTGVPLDLLGRGTHVYRMTR 718
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10423.308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB75_ECTSI1.170e-5553.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9P2_9PHAE1.130e-5353.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10423contigS-dermatodea_contig10423:3509..6955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10423.308.1mRNA_S-dermatodea_contig10423.308.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10423 3499..6955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10423.308.1 ID=prot_S-dermatodea_contig10423.308.1|Name=mRNA_S-dermatodea_contig10423.308.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=292bp
MRINMSDPRGAATLSGEMTAKSHFVLNATTGLTSLACTIFDTQDYANTRY
STTSVYTELRYGTGEDDDGSRLLTIENHLGVPVTVSLERTDDAGEDALDT
SSSRGLHFGRKSKNSPPQSSGKTISTSTKLAASLYAKKGKAEANPQETRA
GMAGTPADRISLGELLVPDAKKSLQTATVTVAVKGFQPLSGVPLDLLGRG
THVFKMTRYEAQSPSMHKKRWRFEGLVVKFVARPARDPAVLDLAMQLQTN
VFLKNDTPRPLRVSLSRERDHEPNTMIPVDGEVCLPFPLLSE
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