prot_S-dermatodea_contig10418.303.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10418.303.1
Unique Nameprot_S-dermatodea_contig10418.303.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length414
Homology
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BLAST of mRNA_S-dermatodea_contig10418.303.1 vs. uniprot
Match: A0A6H5K8X9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X9_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 8.660e-13
Identity = 79/202 (39.11%), Postives = 95/202 (47.03%), Query Frame = 0 
Query:    1 MKRSRTCQCLVDLDD--TPKRTRSTP-DLGALRRLGALQQRQTSRDVFGGRQNFDLDSALRLLRQAVAIPEEAXXXXXXXXXXXXTSCTAPG---GPMFSAGSGLMADSIVRSKGSLNEVTILEHEQFIGQESGDYANSSGMEHYGMASGMALP-------------FGGVLPGSLFDEDSGDSSDYFCGVASSDEAEDDDT 183
            MKRSRTC  L +LD    PKRT S P +LG+            S  V   RQN +    L  L+Q  A                  S  A G    P   A    + +SIVRS+ SLNE+TI E +QFIGQES + A +   +    A                   FGG + GSLF ED GDSSDYFCGV SSDEA++D T
Sbjct:    1 MKRSRTCLNLFELDTPAAPKRTCSLPSNLGSFSSSSISSSSSFSLSV---RQNQE---RLLFLQQHAA------------------STLAQGTAAAPATIADGAFVVESIVRSQRSLNEITIHEGQQFIGQESNEAATAVPQQQSLAAXXXXXXXXXXXXXXXPLSLFGGAVIGSLF-EDGGDSSDYFCGVDSSDEADEDST 177
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10418.303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K8X9_9PHAE8.660e-1339.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10418contigS-dermatodea_contig10418:1398..6060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10418.303.1mRNA_S-dermatodea_contig10418.303.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10418 1296..6086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10418.303.1 ID=prot_S-dermatodea_contig10418.303.1|Name=mRNA_S-dermatodea_contig10418.303.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=414bp
MKRSRTCQCLVDLDDTPKRTRSTPDLGALRRLGALQQRQTSRDVFGGRQN
FDLDSALRLLRQAVAIPEEAAAAAAVAAAAASTSCTAPGGPMFSAGSGLM
ADSIVRSKGSLNEVTILEHEQFIGQESGDYANSSGMEHYGMASGMALPFG
GVLPGSLFDEDSGDSSDYFCGVASSDEAEDDDTRTVGLGLGISKAITNRS
NISALFVTPTTSDSDLAGQLSDSGSSGGASCDSVYATPSGDAAMGETGPL
QGSPSPAWAKALREDGFGYACASSPKPLQGNAWRSTACPRVSVTVCSPST
SAASVGVLVSPSTQGDGSRRQPQLGTVSPPWPAGSPSSGWAYDTASRDAG
SVLMSSVEESYVLMDIGRLRLAETKPPVVEVGSDPMWGCRGPPSVDGAGE
EVDPALERHPALA*
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