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Homology
BLAST of mRNA_S-dermatodea_contig10418.303.1 vs. uniprot
Match: A0A6H5K8X9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 4.850e-13 Identity = 79/202 (39.11%), Postives = 95/202 (47.03%), Query Frame = 1
Query: 103 MKRSRTCQCLVDLDD--TPKRTRSTP-DLGALRRLGALQQRQTSRDVFGGRQNFDLDSALRLLRQAVAIPEEAXXXXXXXXXXXXTSCTAPG---GPMFSAGSGLMADSIVRSKGSLNEVTILEHEQFIGQESGDYANSSGMEHYGMASGMALP-------------FGGVLPGSLFDEDSGDSSDYFCGVASSDEAEDDDT 651
MKRSRTC L +LD PKRT S P +LG+ S V RQN + L L+Q A S A G P A + +SIVRS+ SLNE+TI E +QFIGQES + A + + A FGG + GSLF ED GDSSDYFCGV SSDEA++D T
Sbjct: 1 MKRSRTCLNLFELDTPAAPKRTCSLPSNLGSFSSSSISSSSSFSLSV---RQNQE---RLLFLQQHAA------------------STLAQGTAAAPATIADGAFVVESIVRSQRSLNEITIHEGQQFIGQESNEAATAVPQQQSLAAXXXXXXXXXXXXXXXPLSLFGGAVIGSLF-EDGGDSSDYFCGVDSSDEADEDST 177
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-00_007150.1 |
| Exons | 3 |
| Model size | 1370 |
| Cds size | 1242 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10418.303.1 >prot_S-dermatodea_contig10418.303.1 ID=prot_S-dermatodea_contig10418.303.1|Name=mRNA_S-dermatodea_contig10418.303.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=414bp
MKRSRTCQCLVDLDDTPKRTRSTPDLGALRRLGALQQRQTSRDVFGGRQN FDLDSALRLLRQAVAIPEEAAAAAAVAAAAASTSCTAPGGPMFSAGSGLM ADSIVRSKGSLNEVTILEHEQFIGQESGDYANSSGMEHYGMASGMALPFG GVLPGSLFDEDSGDSSDYFCGVASSDEAEDDDTRTVGLGLGISKAITNRS NISALFVTPTTSDSDLAGQLSDSGSSGGASCDSVYATPSGDAAMGETGPL QGSPSPAWAKALREDGFGYACASSPKPLQGNAWRSTACPRVSVTVCSPST SAASVGVLVSPSTQGDGSRRQPQLGTVSPPWPAGSPSSGWAYDTASRDAG SVLMSSVEESYVLMDIGRLRLAETKPPVVEVGSDPMWGCRGPPSVDGAGE EVDPALERHPALA* back to topmRNA from alignment at S-dermatodea_contig10418:1296..6086+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig10418.303.1 ID=mRNA_S-dermatodea_contig10418.303.1|Name=mRNA_S-dermatodea_contig10418.303.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4791bp|location=Sequence derived from alignment at S-dermatodea_contig10418:1296..6086+ (Saccorhiza dermatodea SderLu1190fm monoicous) AGCTATCATAGGATCATAGGGCACCCTAAAAGCAACCTCTTCTACCTTCG
CCATCCCCCGGGCTATCACAATTGCCCCAAGGAGAGCCGACGAAACTGCA
CCATGAAGCGCAGCCGAACGTGTCAGTGCCTGGTTGATCTCGACGACACC
CCGAAGCGGACGCGCTCGACCCCGGACTTGGGCGCGCTCCGGCGCCTGGG
GGCTCTGCAGCAGCGCCAAACCTCGAGAGATGTCTTCGGCGGCAGGCAGA
ACTTCGATCTCGACTCAGCCCTGCGGCTGCTACGCCAGGCGGTTGCAATC
CCAGGTGAGCACGTGCACCATCGGTGGCCGATGTGCTGGGGCTCAGAGGT
TGGCAGGTCGGGGGGAGAGCGGGGGGCGGCGGGGGGAGATCGCGCACGCA
CGGAGAGTTGTCGGGGTGGAGCGTTTTTTCGGGAGATGGCTCTCTTTTTC
CAACGTCACCGGATCTGTCGGGAGTCGACCGGAATTCATAATTCCTCTCC
TGAAGTTAGGCACCAGCAGCGAGTGTTCGCGGCGGCGCAGGAAAAGGCAG
CGCGGCGCTCGCGACACCGGTCGTGGAGCATTTGCAGAAGCGTGTGCCGT
CTTTGCTTGCTTTGCTTCGCGAGTGAAGACGGCGGTCGGGGGGGAGAGGA
GGGGGGGGGGTGGAGCGCAGGCCCTCTCAAATCTCTGAGCTGGCATGGCA
GTCGCCCCTGCTGTGCGTACTTCACTTCGCTTCACTTCACTTCATTTTCT
GCCACTCTCCTGCTGTGTTCGATTCTATATTCTCCACAAGAACTGTAGCA
GGTACAGTAGATAAATATAGCTTTATACATAAGCGTACCTCCAAAACCTC
CAAACTGCACGTTGAAGTCCACCTACCCCCACCCCCCCCCCAGCCCCTCC
ATGACCGATGGCCCGCGGCATTCCTGACACCGATTGCCTCTCTCCTCGCC
TCTTGCCGGCCTCCGAATCGCAGAGGAAGCAGCAGCGGCGGCGGCGGTGG
CGGCGGCAGCGGCATCGACTTCATGCACCGCTCCTGGAGGGCCCATGTTC
TCGGCGGGTAGCGGCTTGATGGCTGACAGCATCGTGCGCTCCAAGGGATC
GCTCAACGAGGTGACAATTCTTGAGCACGAGCAGTTTATAGGGCAAGAGA
GCGGGGACTACGCCAACAGCAGCGGAATGGAGCACTATGGGATGGCCTCG
GGGATGGCCCTGCCGTTCGGTGGGGTCTTACCCGGCAGCTTGTTCGACGA
GGACTCGGGAGACTCTAGCGACTACTTTTGTGGGGTGAGTTTTTATTTAC
GTTAAAATACTTGGATAGAACGAGTAGTTTAGCTATCAAGAGACGGAACG
GCCAAATGTATGTGTTTTAATACAGCTGCTGTACTAATCTTTACCAATTC
TTACGTTTCGTGTTTTGTGGATCGTGCGTTGACCCGCTTAAAAAGGAAAA
TACCTGGATTTTTGTTGTTGTTGTTGTGGACCTGGATGAAATTATGTGTG
TGGTCTGTGTTTGATGAAGTCGACATATTCAACTCCATCGAGCACTGCGG
CAGCAGCAGGAGAAAACTGCTGCTGCTGCTGCTGCTGCTGCTGCCTGCGG
ACGAACTCTTTTTTGTGCTTATATTTCAGTAGAAGACTGCTGCACATATA
ATATGTATCAGACTACTGCTGCAGTACCTGGATTTCGATTGAAGCAAGCC
CTGATTTGTTTCTATACTAGAATTAGCGCTGCTGCTCAGCTGCTGTGCAT
TGCCACGAACAAAACCAAAAACCAAGACGATACTATTGTATTCATTAATA
AGGATTATAGAATGATAAAATATCATGTTGATTCATACAGTAGTACTTGG
ACCCGCACATTGTATCCCCAGCAGCAAAGCGCCGTTTTATTTCTTTCTTT
TTTTTGCGCCGAAATATTCGCTGGCCGGTGGCGCGTGCCCTCTCCTCGAC
GGTGGTGGTGGTGTTGTCGTGGTGGCGGGAGGTCTTGGAAAAGAAAAATA
TTTTCGACTGGTAAAATGTTGAGGATTGTTCGACTTTTGGATATCATATA
TACTCACAAGACACTCAGGGACATGATGATGATTGTCCTCGGCCGGTACA
ACTCTTCTCTTTCCATACCTGCTACGTTGTTCTCCCCCGAAAAAATTGGA
ATGGAAACACCAGTTTTGTGGACGGAGCTTTTCTTTTTCGTTTGTCCCAA
TCTATCATACTATTAATATCAATATTAATAACTGTATCATAACATAAGAG
GTGTTTTGTGCATTGTCCAGGATTTTTCACACATGTACCACATTTGATAC
AATACTATACTTTCATACCAGTATCATACTTTCGTTGTCTTCTGTAAAAG
TATTCGGCACCTTGTTTGTCCACGTGACGTCAAACATGCGCATCAAGACG
TGTTTCGCCAGTCAGGGTGTCGCCGGAGATTACGCGGTTACTATATATGT
ATCTCGTCTCATCTGCATCCCCAGGGCGCTCATGCGTCGACGCGGGCGCG
GGAGTGCTTTGGGCGTCAGTAATAGACCGCCTCGACGTTTCTGCTGAATC
GCGCCGTCGCTGTAACATGCCTCACCCCCCCCCCCCTCCCCCCCCGAAGA
CGGTATTTGGATTCGAAAGGCAACACAACCGCACCTTCAAAATCGCGACG
AAATGCTGACGGTCGCGTGTGCATCCCAGGACATGACATGCATGCATGCG
CACTTGTATTCCGATGTTCTATTATCAGTATCATAGTATTAAGAGTATGT
TCCGAGGGAATCATGAATCATGCTTCTCTTCTTTTTTTGCCGTGCGGCGA
GAGACTTGTTGGTTGCCTTGCGGGCGGCGTTTGGGAGGTTACAAGGGCCT
GTTTCACGAACGTACTGCAGATCCGTCCAAAAAGAATGTCGAGAAAGTAT
TGCAAAGCGCTGTGATAGGTACAGTAGAAGGCCACCGTCCGTATACGCTG
TAAGTAGATTCTGATTTTTTAGTAGTTGCCCCGTCATACAAAAAATCTCG
ACGGACAGAACAAATATTTTTTGGCCAGCTGGGGCTACTCTTCTGTTCTG
CCCACCGACAGATCGGTTAAGTGTTCTTACAGTTGTTGGACCAGGTAGCG
AGCGCCATCTCCCCGAAACCGAACGGGCTAAGGCAGCATGAGTGGACATT
GTAGTGGGCATGCCAGTGGGCTGTTAGTGGACATGTGCGATGGAGGCGCC
AGGTAGGCGCCGCGCTCACACGCCACCGCCACGAGAAGCATACAATTTTG
TGATGTGTATAGGAAGAATCGGCGATCGTGGTGGCACTGCACCATCATGG
TCGAGAGTGCGTTACAGGTTGACGAGAGGCCATCACCAGCTTTTACGAAA
AGAAAAGAAAAGAAAAAAAGAGGGTGATGCCAAGCCGCACCTCACGGAAA
ACAAATCGCTTCAGACACGGCAAGAGACCCGCGCTTGCACATTGATTGCC
GCCTGACCATGTCACAGCGATGCCGCACGGTGCCGGCGGCAGGCTGTGCT
CGGGCGAGCAAAACTGGCTGCATGGCCAGCTTCGGAGTGATTCTGTCGCA
CTGTCGCTCAGAGCAGTGGTGTGGTCCGCTGAGGACTGCTGCTGCTGGGG
CTGGTGCTGCCTCTCCTTCATGTTAAAATCATATTTTTCGACAAAAAAAG
CAAGAAACATGTGTGCATTTTCATTTCATACTTTGCAGTATACCTGTCGA
TGACAAATGACCACAAGGTTGTGCACAGGGCAGAATTTGCCACAGATCTC
GCGTTCTCGTTTGAGCCAAGCCCTCCACGATCTAATACTTGTATCGATCG
CGTGTACCCCGCCCGCGTCCGACTAGTGGCTTCTCGCTGAAAAGCACTTT
GCTCTCAAATCGAAAAACATATCATACTTGTACTACTGTAGTGCAAGCAT
TCTACCGTTCAGGATCTTTGGCCCTCCCACCAAACTGCCACATTCCTTCT
CGCCTTTGCGTCAGAAAAGGTTCTTCCGAATCTCTAATTCCCGGCCGGCC
ATTTTTTTATTAATTATTTTTTCAATTTCCCGACAGGTGGCCTCATCTGA
CGAGGCGGAAGACGACGACACGAGGACCGTCGGCCTCGGCCTCGGCATAT
CGAAAGCCATCACCAACCGCAGCAACATCAGCGCCCTATTCGTCACGCCC
ACCACGAGCGACTCCGACCTCGCCGGGCAACTCTCAGACTCCGGGAGCAG
TGGCGGCGCCTCTTGCGACAGCGTGTACGCCACCCCTTCAGGCGATGCCG
CCATGGGAGAAACAGGCCCGCTCCAGGGGTCACCGTCGCCGGCCTGGGCT
AAGGCGCTCCGCGAGGACGGGTTTGGCTATGCCTGCGCCTCCTCCCCGAA
GCCGCTCCAAGGAAACGCGTGGCGATCCACCGCGTGCCCCAGGGTCAGCG
TGACGGTTTGCTCGCCTAGCACCTCCGCCGCCAGCGTCGGTGTGCTGGTT
TCTCCAAGTACCCAGGGCGATGGCAGCCGCAGGCAGCCGCAGCTCGGTAC
CGTCTCTCCACCATGGCCGGCAGGCTCGCCGTCGTCCGGTTGGGCATATG
ACACCGCCTCCCGCGACGCGGGGTCGGTGTTAATGTCTTCCGTGGAGGAG
TCGTATGTGCTGATGGACATCGGGCGGCTGAGGTTGGCAGAAACGAAGCC
GCCCGTGGTTGAGGTGGGATCGGACCCCATGTGGGGTTGCCGGGGACCTC
CTTCCGTAGATGGTGCCGGAGAAGAGGTAGACCCGGCCTTGGAGCGCCAT
CCAGCCTTGGCGTAGAAGTGGGGTCGTGGTAAGAGAATGGG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig10418:1296..6086+ >mRNA_S-dermatodea_contig10418.303.1 ID=mRNA_S-dermatodea_contig10418.303.1|Name=mRNA_S-dermatodea_contig10418.303.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2484bp|location=Sequence derived from alignment at S-dermatodea_contig10418:1296..6086+ (Saccorhiza dermatodea SderLu1190fm monoicous) ATGAAGCGCAGCCGAACGTGTCAGTGCCTGGTTGATCTCGACGACACCCC GAAGCGGACGCGCTCGACCCCGGACTTGGGCGCGCTCCGGCGCCTGGGGG CTCTGCAGCAGCGCCAAACCTCGAGAGATGTCTTCGGCGGCAGGCAGAAC TTCGATCTCGACTCAGCCCTGCGGCTGCTACGCCAGGCGGTTGCAATCCC AGATGAAGCGCAGCCGAACGTGTCAGTGCCTGGTTGATCTCGACGACACC CCGAAGCGGACGCGCTCGACCCCGGACTTGGGCGCGCTCCGGCGCCTGGG GGCTCTGCAGCAGCGCCAAACCTCGAGAGATGTCTTCGGCGGCAGGCAGA ACTTCGATCTCGACTCAGCCCTGCGGCTGCTACGCCAGGCGGTTGCAATC CCAGAGGAAGCAGCAGCGGCGGCGGCGGTGGCGGCGGCAGCGGCATCGAC TTCATGCACCGCTCCTGGAGGGCCCATGTTCTCGGCGGGTAGCGGCTTGA TGGCTGACAGCATCGTGCGCTCCAAGGGATCGCTCAACGAGGTGACAATT CTTGAGCACGAGCAGTTTATAGGGCAAGAGAGCGGGGACTACGCCAACAG CAGCGGAATGGAGCACTATGGGATGGCCTCGGGGATGGCCCTGCCGTTCG GTGGGGTCTTACCCGGCAGCTTGTTCGACGAGGACTCGGGAGACTCTAGC GACTACTTTTGTGGGAGGAAGCAGCAGCGGCGGCGGCGGTGGCGGCGGCA GCGGCATCGACTTCATGCACCGCTCCTGGAGGGCCCATGTTCTCGGCGGG TAGCGGCTTGATGGCTGACAGCATCGTGCGCTCCAAGGGATCGCTCAACG AGGTGACAATTCTTGAGCACGAGCAGTTTATAGGGCAAGAGAGCGGGGAC TACGCCAACAGCAGCGGAATGGAGCACTATGGGATGGCCTCGGGGATGGC CCTGCCGTTCGGTGGGGTCTTACCCGGCAGCTTGTTCGACGAGGACTCGG GAGACTCTAGCGACTACTTTTGTGGGGTGGCCTCATCTGACGAGGCGGAA GACGACGACACGAGGACCGTCGGCCTCGGCCTCGGCATATCGAAAGCCAT CACCAACCGCAGCAACATCAGCGCCCTATTCGTCACGCCCACCACGAGCG ACTCCGACCTCGCCGGGCAACTCTCAGACTCCGGGAGCAGTGGCGGCGCC TCTTGCGACAGCGTGTACGCCACCCCTTCAGGCGATGCCGCCATGGGAGA AACAGGCCCGCTCCAGGGGTCACCGTCGCCGGCCTGGGCTAAGGCGCTCC GCGAGGACGGGTTTGGCTATGCCTGCGCCTCCTCCCCGAAGCCGCTCCAA GGAAACGCGTGGCGATCCACCGCGTGCCCCAGGGTCAGCGTGACGGTTTG CTCGCCTAGCACCTCCGCCGCCAGCGTCGGTGTGCTGGTTTCTCCAAGTA CCCAGGGCGATGGCAGCCGCAGGCAGCCGCAGCTCGGTACCGTCTCTCCA CCATGGCCGGCAGGCTCGCCGTCGTCCGGTTGGGCATATGACACCGCCTC CCGCGACGCGGGGTCGGTGTTAATGTCTTCCGTGGAGGAGTCGTATGTGC TGATGGACATCGGGCGGCTGAGGTTGGCAGAAACGAAGCCGCCCGTGGTT GAGGTGGGATCGGACCCCATGTGGGGTTGCCGGGGACCTCCTTCCGTAGA TGGTGCCGGAGAAGAGGTAGACCCGGCCTTGGAGCGCCATCCAGCCTTGG CGTAGGTGGCCTCATCTGACGAGGCGGAAGACGACGACACGAGGACCGTC GGCCTCGGCCTCGGCATATCGAAAGCCATCACCAACCGCAGCAACATCAG CGCCCTATTCGTCACGCCCACCACGAGCGACTCCGACCTCGCCGGGCAAC TCTCAGACTCCGGGAGCAGTGGCGGCGCCTCTTGCGACAGCGTGTACGCC ACCCCTTCAGGCGATGCCGCCATGGGAGAAACAGGCCCGCTCCAGGGGTC ACCGTCGCCGGCCTGGGCTAAGGCGCTCCGCGAGGACGGGTTTGGCTATG CCTGCGCCTCCTCCCCGAAGCCGCTCCAAGGAAACGCGTGGCGATCCACC GCGTGCCCCAGGGTCAGCGTGACGGTTTGCTCGCCTAGCACCTCCGCCGC CAGCGTCGGTGTGCTGGTTTCTCCAAGTACCCAGGGCGATGGCAGCCGCA GGCAGCCGCAGCTCGGTACCGTCTCTCCACCATGGCCGGCAGGCTCGCCG TCGTCCGGTTGGGCATATGACACCGCCTCCCGCGACGCGGGGTCGGTGTT AATGTCTTCCGTGGAGGAGTCGTATGTGCTGATGGACATCGGGCGGCTGA GGTTGGCAGAAACGAAGCCGCCCGTGGTTGAGGTGGGATCGGACCCCATG TGGGGTTGCCGGGGACCTCCTTCCGTAGATGGTGCCGGAGAAGAGGTAGA CCCGGCCTTGGAGCGCCATCCAGCCTTGGCGTAG back to top
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