prot_S-dermatodea_contig10382.277.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10382.277.1
Unique Nameprot_S-dermatodea_contig10382.277.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length61
Homology
BLAST of mRNA_S-dermatodea_contig10382.277.1 vs. uniprot
Match: D7FWM8_ECTSI (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM8_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 3.200e-31
Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 0
Query:    1 KVDGLPNDYEGTAKTREWLVTLNSMRAAEELSEDQARQLLHDLDTSYSAFFRYLEMTHKP 60
            KVDGLPNDYEGT KTREWLVTLN+MRAA+ELSEDQARQLLHDLDTSYSAFFRYLEMT KP
Sbjct:  174 KVDGLPNDYEGTQKTREWLVTLNAMRAADELSEDQARQLLHDLDTSYSAFFRYLEMTQKP 233          
BLAST of mRNA_S-dermatodea_contig10382.277.1 vs. uniprot
Match: A0A7S1UKK1_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKK1_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.030e-16
Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 KVDGLPNDYEGTAKTREWLVTLNSMRAAEELSEDQARQLLHDLDTSYSAFFRYLE 55
            +V GLP D+EGT K + WL TLN MRA +ELSEDQ+RQL HDL++SYSAF R+L+
Sbjct:  145 RVPGLPADFEGTTKLQGWLATLNGMRAVDELSEDQSRQLEHDLESSYSAFHRFLK 199          
BLAST of mRNA_S-dermatodea_contig10382.277.1 vs. uniprot
Match: A0A836CDG2_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG2_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.950e-14
Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 KVDGLPNDYEGTAKTREWLVTLNSMRAAEELSEDQARQLLHDLDTSYSAFFRYL 54
            K +GLP  +EG    R WL+T N +RA+++L ++Q RQLLHDLD SYSAFFR+L
Sbjct:  186 KCEGLPEGFEGVKTMRAWLITFNGLRASDQLDDEQVRQLLHDLDVSYSAFFRFL 239          
BLAST of mRNA_S-dermatodea_contig10382.277.1 vs. uniprot
Match: A0A6S9EJI3_HETAK (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9EJI3_HETAK)

HSP 1 Score: 70.5 bits (171), Expect = 3.550e-13
Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 KVDGLPNDYEGTAKTREWLVTLNSMRAAEELSEDQARQLLHDLDTSYSAFFRYLE 55
            ++  LP D+  T K   WL  LN +RAA+EL EDQARQLLHDLD +YS FFR+LE
Sbjct:  182 RLAALPADFAPTQKIEAWLKELNGLRAADELGEDQARQLLHDLDAAYSGFFRFLE 236          
BLAST of mRNA_S-dermatodea_contig10382.277.1 vs. uniprot
Match: A0A482RPG3_9ARCH (VPS28 C-terminal domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RPG3_9ARCH)

HSP 1 Score: 67.0 bits (162), Expect = 4.890e-13
Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 KVDGLPNDYEGTAKTREWLVTLNSMRAAEELSEDQARQLLHDLDTSYSAFFRYLEM 56
            K+  LP D+EG+ KT+ WL  LNS+RA +ELSE+  RQLL DL+T+YSAF + L M
Sbjct:   42 KLHFLPADFEGSVKTKGWLAKLNSLRAVDELSEEDIRQLLFDLETNYSAFHKLLGM 97          
BLAST of mRNA_S-dermatodea_contig10382.277.1 vs. uniprot
Match: A0A068RQ46_9FUNG (Vacuolar protein sorting-associated protein 28 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RQ46_9FUNG)

HSP 1 Score: 69.3 bits (168), Expect = 9.580e-13
Identity = 29/58 (50.00%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    2 VDGLPNDYEGTAKTREWLVTLNSMRAAEELSEDQARQLLHDLDTSYSAFFRYLEMTHK 59
            V GLP D+EG +K R+WL+TLNSM+A++E++E+QARQ+L +++ S++ F+R L    K
Sbjct:  180 VPGLPGDFEGRSKVRQWLITLNSMKASDEITEEQARQMLFEMEQSHTEFYRLLSGDQK 237          
BLAST of mRNA_S-dermatodea_contig10382.277.1 vs. uniprot
Match: A0A1C7N828_9FUNG (Vacuolar protein sorting-associated protein 28 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N828_9FUNG)

HSP 1 Score: 68.9 bits (167), Expect = 1.210e-12
Identity = 31/59 (52.54%), Postives = 45/59 (76.27%), Query Frame = 0
Query:    1 KVDGLPNDYEGTAKTREWLVTLNSMRAAEELSEDQARQLLHDLDTSYSAFFRYLEMTHK 59
            KV GL  D+EG  K R+WL+TL+SM+A++E++E+QARQ+L ++D S+S F R L   HK
Sbjct:  174 KVPGLTPDFEGKQKVRQWLITLHSMKASDEITEEQARQMLFEMDQSHSEFHRLLSGEHK 232          
BLAST of mRNA_S-dermatodea_contig10382.277.1 vs. uniprot
Match: A0A1X2HJJ5_SYNRA (Vacuolar protein sorting-associated protein 28 n=2 Tax=Mucorales TaxID=4827 RepID=A0A1X2HJJ5_SYNRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.420e-12
Identity = 29/58 (50.00%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    2 VDGLPNDYEGTAKTREWLVTLNSMRAAEELSEDQARQLLHDLDTSYSAFFRYLEMTHK 59
            V GLP D+EG AK R+WL+TL+SM+A+++++E+QARQ+L ++D S++ F+R L    K
Sbjct:  136 VPGLPADFEGKAKVRQWLITLHSMKASDQITEEQARQMLFEMDQSHTEFYRLLSGEQK 193          
BLAST of mRNA_S-dermatodea_contig10382.277.1 vs. uniprot
Match: A0A812XGV8_SYMMI (Vps28 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XGV8_SYMMI)

HSP 1 Score: 68.9 bits (167), Expect = 1.760e-12
Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 KVDGLPNDYEGTAKTREWLVTLNSMRAAEELSEDQARQLLHDLDTSYSAFFRYL 54
            +V GLP D+EG  K R WL  LN MRA EELS+++ARQL+ DL+ +YSAF RYL
Sbjct:  207 RVAGLPADFEGLVKMRLWLQKLNQMRAVEELSDEEARQLIFDLEGAYSAFHRYL 260          
BLAST of mRNA_S-dermatodea_contig10382.277.1 vs. uniprot
Match: UPI00083C35C9 (vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C35C9)

HSP 1 Score: 66.6 bits (161), Expect = 6.930e-12
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    5 LPNDYEGTAKTREWLVTLNSMRAAEELSEDQARQLLHDLDTSYSAFFRYLEMT 57
            LP+D+EG  K  +WL TLNSM+A++ELSE Q RQLL DL++SYSAF + L  T
Sbjct:  161 LPSDFEGKQKVTDWLATLNSMQASDELSEAQVRQLLFDLESSYSAFNKVLHNT 213          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10382.277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWM8_ECTSI3.200e-3193.33Vacuolar protein sorting-associated protein 28 hom... [more]
A0A7S1UKK1_9STRA3.030e-1665.45Vacuolar protein sorting-associated protein 28 hom... [more]
A0A836CDG2_9STRA4.950e-1457.41Vacuolar protein sorting-associated protein 28 hom... [more]
A0A6S9EJI3_HETAK3.550e-1360.00Vacuolar protein sorting-associated protein 28 hom... [more]
A0A482RPG3_9ARCH4.890e-1357.14VPS28 C-terminal domain-containing protein n=1 Tax... [more]
A0A068RQ46_9FUNG9.580e-1350.00Vacuolar protein sorting-associated protein 28 n=2... [more]
A0A1C7N828_9FUNG1.210e-1252.54Vacuolar protein sorting-associated protein 28 n=1... [more]
A0A1X2HJJ5_SYNRA1.420e-1250.00Vacuolar protein sorting-associated protein 28 n=2... [more]
A0A812XGV8_SYMMI1.760e-1261.11Vps28 protein n=1 Tax=Symbiodinium microadriaticum... [more]
UPI00083C35C96.930e-1260.38vacuolar protein sorting-associated protein 28 hom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007143Vacuolar protein sorting-associated Vps28PFAMPF03997VPS28coord: 3..54
e-value: 3.6E-15
score: 56.1
IPR007143Vacuolar protein sorting-associated Vps28PANTHERPTHR12937VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28coord: 1..55
IPR037206VPS28, C-terminal domain superfamilyGENE3D1.20.120.1130coord: 1..56
e-value: 3.1E-17
score: 64.3
IPR037206VPS28, C-terminal domain superfamilySUPERFAMILY140427VPS28 C-terminal domain-likecoord: 5..54
IPR017899Vacuolar protein sorting-associated, VPS28, C-terminalPROSITEPS51310VPS28_Ccoord: 1..55
score: 22.17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10382contigS-dermatodea_contig10382:135..317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10382.277.1mRNA_S-dermatodea_contig10382.277.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10382 135..317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10382.277.1 ID=prot_S-dermatodea_contig10382.277.1|Name=mRNA_S-dermatodea_contig10382.277.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=61bp
KVDGLPNDYEGTAKTREWLVTLNSMRAAEELSEDQARQLLHDLDTSYSAF
FRYLEMTHKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007143Vps28
IPR037206VPS28_C_sf
IPR017899VPS28_C